MGE detailed information
MGE type: Prophage MGE length: 22833 bp
Accession: NZ_CP064332 Location: 445982..468814 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Accession: NZ_CP064332 Location: 445982..468814 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD21_RS01790 () | 441354..443144 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| IUD21_RS01795 () | 443165..443950 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| IUD21_RS01800 () | 444071..444319 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| IUD21_RS01805 () | 444342..444722 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| IUD21_RS01810 () | 444748..445989 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| IUD21_RS01815 () | 445982..446704 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| IUD21_RS01820 () | 447052..449529 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| IUD21_RS01825 () | 449514..450176 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| IUD21_RS01830 () | 450181..450618 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| IUD21_RS01835 () | 450636..452384 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| IUD21_RS01840 () | 452381..453400 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| IUD21_RS01845 () | 453807..454526 | - | 720 | Protein_345 | phage late control D family protein | - |
| IUD21_RS01850 () | 454426..455397 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| IUD21_RS01855 () | 455405..455962 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD21_RS01860 () | 455955..456847 | - | 893 | Protein_348 | baseplate J/gp47 family protein | - |
| IUD21_RS01865 () | 456847..457185 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD21_RS01870 () | 457383..457664 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD21_RS01875 () | 457675..457950 | + | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD21_RS01880 () | 458038..458340 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| IUD21_RS01885 () | 458343..458744 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| IUD21_RS01890 () | 458813..459400 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD21_RS01895 () | 459397..459939 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD21_RS01900 () | 459915..460436 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD21_RS01905 () | 460433..460756 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| IUD21_RS01910 () | 460756..461016 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| IUD21_RS01915 () | 461034..462908 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| IUD21_RS01920 () | 462905..463537 | - | 633 | WP_011097618.1 | phage portal protein | - |
| IUD21_RS01925 () | 463492..464052 | + | 561 | WP_080502611.1 | hypothetical protein | - |
| IUD21_RS01930 () | 464049..464327 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| IUD21_RS01935 () | 464329..464637 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| IUD21_RS01940 () | 464722..466140 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| IUD21_RS01945 () | 466137..466391 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| IUD21_RS01950 () | 466381..467400 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD21_RS01955 () | 468173..468814 | + | 642 | WP_011097625.1 | Chromosome-partitioning ATPase Soj | VF |
| IUD21_RS01960 () | 468842..469318 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| IUD21_RS01965 () | 469323..469895 | + | 573 | WP_011097627.1 | YceI family protein | - |
| IUD21_RS01970 () | 469892..471850 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| IUD21_RS01975 () | 472783..473172 | - | 390 | WP_004089975.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|