MGE detailed information
MGE type: Prophage MGE length: 46723 bp
Accession: NZ_CP064332 Location: 1310943..1357665 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Accession: NZ_CP064332 Location: 1310943..1357665 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD21_RS05850 () | 1306271..1307056 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IUD21_RS05855 () | 1307093..1309699 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| IUD21_RS05860 () | 1310132..1310863 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| IUD21_RS05865 () | 1310943..1311803 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| IUD21_RS05870 () | 1312008..1312826 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| IUD21_RS05880 () | 1313599..1313943 | - | 345 | WP_004084923.1 | RidA family protein | - |
| IUD21_RS05885 () | 1314146..1314478 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| IUD21_RS05890 () | 1314670..1315752 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| IUD21_RS05895 () | 1315743..1315961 | - | 219 | WP_004088371.1 | tail protein X | - |
| IUD21_RS05900 () | 1315958..1316440 | - | 483 | WP_011097928.1 | phage tail protein | - |
| IUD21_RS05905 () | 1316437..1318656 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| IUD21_RS05910 () | 1318783..1319070 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| IUD21_RS05915 () | 1319073..1319582 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| IUD21_RS05920 () | 1319582..1320760 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| IUD21_RS05925 () | 1320825..1322417 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| IUD21_RS05930 () | 1322425..1322982 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD21_RS05935 () | 1322975..1323868 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| IUD21_RS05940 () | 1323868..1324206 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD21_RS05945 () | 1324356..1324619 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IUD21_RS05950 () | 1324606..1324887 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| IUD21_RS05955 () | 1324924..1325511 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD21_RS05960 () | 1325508..1326050 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD21_RS05965 () | 1326026..1326547 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD21_RS05970 () | 1326544..1326867 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| IUD21_RS05975 () | 1326867..1327127 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| IUD21_RS05980 () | 1327145..1329019 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| IUD21_RS05985 () | 1329016..1330602 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| IUD21_RS05990 () | 1330599..1331150 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| IUD21_RS05995 () | 1331154..1333106 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| IUD21_RS06000 () | 1333099..1333674 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| IUD21_RS06005 () | 1333805..1334029 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| IUD21_RS06010 () | 1334031..1334492 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| IUD21_RS06015 () | 1334482..1334811 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| IUD21_RS06020 () | 1334804..1335298 | - | 495 | WP_011097941.1 | lysozyme | - |
| IUD21_RS06025 () | 1335265..1335882 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| IUD21_RS06030 () | 1336301..1338832 | - | 2532 | WP_012382624.1 | primase | - |
| IUD21_RS06035 () | 1338968..1339534 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| IUD21_RS06040 () | 1339531..1339917 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| IUD21_RS06045 () | 1339914..1340300 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| IUD21_RS06050 () | 1340297..1340581 | - | 285 | Protein_1173 | hypothetical protein | - |
| IUD21_RS06055 () | 1340796..1341066 | - | 271 | Protein_1174 | hypothetical protein | - |
| IUD21_RS06060 () | 1341063..1341320 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| IUD21_RS06065 () | 1341551..1341796 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| IUD21_RS06070 () | 1341857..1342105 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| IUD21_RS06075 () | 1342102..1342290 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| IUD21_RS06080 () | 1342344..1342910 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| IUD21_RS06085 () | 1342900..1343160 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| IUD21_RS06090 () | 1343246..1344004 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| IUD21_RS06095 () | 1344018..1344203 | - | 186 | WP_162501647.1 | hypothetical protein | - |
| IUD21_RS06100 () | 1344165..1344704 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| IUD21_RS06105 () | 1344727..1344936 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| IUD21_RS06110 () | 1344990..1345373 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| IUD21_RS06115 () | 1345591..1345980 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| IUD21_RS06120 () | 1345977..1346441 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| IUD21_RS06125 () | 1346498..1346980 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| IUD21_RS06130 () | 1347280..1347471 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| IUD21_RS06135 () | 1347495..1347686 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| IUD21_RS06140 () | 1347718..1347915 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| IUD21_RS06145 () | 1347902..1348399 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| IUD21_RS06150 () | 1348396..1349673 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| IUD21_RS06155 () | 1349673..1350239 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| IUD21_RS06160 () | 1350326..1351837 | + | 1512 | WP_011097960.1 | hypothetical protein | - |
| IUD21_RS06165 () | 1351839..1354019 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| IUD21_RS06170 () | 1354016..1354294 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD21_RS06175 () | 1354296..1354742 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| IUD21_RS06180 () | 1354827..1356245 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| IUD21_RS06185 () | 1356242..1356406 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| IUD21_RS06190 () | 1356399..1356656 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD21_RS06195 () | 1356646..1357665 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD21_RS06200 () | 1358029..1360620 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|