MGE detailed information
MGE type: Prophage MGE length: 46753 bp
Accession: NZ_CP064330 Location: 1554173..1600925 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Accession: NZ_CP064330 Location: 1554173..1600925 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD22_RS06970 () | 1550462..1551172 | + | 711 | WP_004088272.1 | epoxyqueuosine reductase QueH | - |
| IUD22_RS06975 () | 1551206..1551832 | + | 627 | WP_004088271.1 | nicotinamidase | - |
| IUD22_RS06980 () | 1551907..1553553 | - | 1647 | WP_004088270.1 | AMP-binding protein | - |
| IUD22_RS06985 () | 1553847..1554155 | - | 309 | WP_012382664.1 | lipid-A-disaccharide synthase N-terminal domain-containing protein | - |
| IUD22_RS06990 () | 1554173..1554895 | - | 723 | WP_004088269.1 | glycosyltransferase | - |
| IUD22_RS06995 () | 1554934..1555905 | - | 972 | WP_004088268.1 | UDP-N-acetylglucosamine 4-epimerase | VF |
| IUD22_RS07000 () | 1556212..1557144 | - | 933 | WP_004088267.1 | ParB/RepB/Spo0J family partition protein | - |
| IUD22_RS07005 () | 1557144..1557938 | - | 795 | WP_004088266.1 | Sporulation initiation inhibitor protein Soj | VF |
| IUD22_RS07010 () | 1558237..1559190 | - | 954 | WP_011098046.1 | MBL fold metallo-hydrolase | - |
| IUD22_RS07015 () | 1559991..1561271 | - | 1281 | WP_004088264.1 | serine--tRNA ligase | - |
| IUD22_RS07020 () | 1561393..1562088 | + | 696 | WP_004088263.1 | energy transducer TonB | - |
| IUD22_RS07025 () | 1562365..1563406 | - | 1042 | Protein_1367 | hypothetical protein ; Integrase | Integrase |
| IUD22_RS07030 () | 1563418..1563727 | - | 310 | Protein_1368 | DUF4224 domain-containing protein | - |
| IUD22_RS07035 () | 1563724..1564039 | - | 316 | Protein_1369 | hypothetical protein | - |
| IUD22_RS07040 () | 1563962..1565023 | + | 1062 | Protein_1370 | DNA polymerase | - |
| IUD22_RS07045 () | 1565022..1565408 | - | 387 | Protein_1371 | lysozyme | - |
| IUD22_RS07050 () | 1565509..1566240 | - | 732 | WP_004089563.1 | site-specific DNA-methyltransferase | - |
| IUD22_RS07055 () | 1566485..1566640 | - | 156 | WP_155115072.1 | hypothetical protein | - |
| IUD22_RS07060 () | 1566929..1568794 | + | 1866 | WP_004089558.1 | excinuclease ABC subunit UvrC | - |
| IUD22_RS07065 () | 1568791..1569420 | + | 630 | WP_004089556.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IUD22_RS07075 () | 1570171..1570629 | - | 459 | WP_011098051.1 | hypothetical protein | - |
| IUD22_RS07080 () | 1570838..1571335 | - | 498 | WP_011098052.1 | hypothetical protein | - |
| IUD22_RS07085 () | 1571940..1572944 | + | 1005 | WP_004089540.1 | porphobilinogen synthase | - |
| IUD22_RS07090 () | 1573508..1573891 | - | 384 | WP_004089538.1 | VOC family protein | - |
| IUD22_RS07095 () | 1574042..1574419 | - | 378 | WP_004089535.1 | DUF2913 family protein | - |
| IUD22_RS07100 () | 1574419..1575122 | + | 704 | Protein_1381 | IS6 family transposase ISEas1 | Transposase |
| IUD22_RS07105 () | 1575254..1576588 | + | 1335 | WP_004089531.1 | glutamate-1-semialdehyde 2,1-aminomutase | - |
| IUD22_RS07110 () | 1576684..1577538 | - | 855 | WP_011098055.1 | iron-sulfur cluster carrier protein ApbC | - |
| IUD22_RS07115 () | 1578030..1578803 | + | 774 | WP_004089528.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| IUD22_RS07120 () | 1578800..1579264 | + | 465 | WP_011098056.1 | Low molecular weight protein-tyrosine-phosphatase YfkJ | VF |
| IUD22_RS07125 () | 1579251..1579964 | - | 714 | WP_011098057.1 | site-specific DNA-methyltransferase | - |
| IUD22_RS07130 () | 1580315..1580596 | + | 282 | WP_011098058.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IUD22_RS07135 () | 1580606..1580905 | + | 300 | WP_004089519.1 | HigA family addiction module antidote protein | - |
| IUD22_RS07140 () | 1581085..1581420 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IUD22_RS07145 () | 1581417..1581671 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IUD22_RS07150 () | 1581724..1582422 | - | 699 | WP_011098059.1 | hypothetical protein | - |
| IUD22_RS07155 () | 1582551..1583012 | - | 462 | WP_011098060.1 | hypothetical protein | - |
| IUD22_RS07160 () | 1583009..1583772 | - | 764 | Protein_1393 | hypothetical protein | - |
| IUD22_RS07165 () | 1583678..1584784 | - | 1107 | WP_012382665.1 | YdaU family protein | - |
| IUD22_RS07170 () | 1584781..1585080 | - | 300 | WP_080513037.1 | hypothetical protein | - |
| IUD22_RS07175 () | 1585079..1585556 | + | 478 | Protein_1396 | conjugal transfer protein | - |
| IUD22_RS07180 () | 1585562..1586167 | + | 606 | WP_004091108.1 | hypothetical protein | VF |
| IUD22_RS07185 () | 1586705..1587152 | + | 448 | Protein_1398 | baseplate J/gp47 family protein | - |
| IUD22_RS07190 () | 1587154..1587831 | + | 678 | WP_004091097.1 | hypothetical protein | - |
| IUD22_RS07195 () | 1587750..1588261 | + | 512 | Protein_1400 | hypothetical protein | - |
| IUD22_RS07200 () | 1588503..1588763 | + | 261 | WP_014607365.1 | hypothetical protein | - |
| IUD22_RS07205 () | 1589278..1589517 | - | 240 | WP_004091081.1 | hypothetical protein | - |
| IUD22_RS07210 () | 1590366..1591694 | - | 1329 | WP_004091079.1 | 3-phosphoshikimate 1-carboxyvinyltransferase | - |
| IUD22_RS07215 () | 1591783..1592907 | - | 1125 | WP_004091077.1 | prephenate dehydratase | - |
| IUD22_RS07220 () | 1592987..1594075 | - | 1089 | WP_011098070.1 | phosphoserine transaminase | - |
| IUD22_RS07225 () | 1594737..1595837 | + | 1101 | WP_194957351.1 | energy transducer TonB | - |
| IUD22_RS07230 () | 1595864..1597048 | - | 1185 | WP_011098072.1 | ABC transporter permease | - |
| IUD22_RS07235 () | 1597045..1597791 | - | 747 | WP_004091068.1 | ABC transporter ATP-binding protein NatA | VF |
| IUD22_RS07240 () | 1597788..1599323 | - | 1536 | WP_004091066.1 | alpha/beta hydrolase | - |
| IUD22_RS07245 () | 1599522..1600022 | - | 501 | WP_004091064.1 | dihydrofolate reductase | - |
| IUD22_RS07250 () | 1600131..1600925 | - | 795 | WP_011098074.1 | thymidylate synthase | - |
| IUD22_RS07255 () | 1600922..1601827 | - | 906 | WP_004091059.1 | prolipoprotein diacylglyceryl transferase | - |
| IUD22_RS07260 () | 1601914..1602294 | - | 381 | WP_004091057.1 | diacylglycerol kinase | - |
| IUD22_RS07265 () | 1602589..1603302 | - | 714 | WP_004085858.1 | response regulator transcription factor | - |
| IUD22_RS07270 () | 1603782..1604903 | - | 1122 | WP_011098075.1 | prephenate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|