MGE detailed information
MGE type: Prophage MGE length: 46721 bp
Accession: NZ_CP064330 Location: 1293705..1340425 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Accession: NZ_CP064330 Location: 1293705..1340425 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD22_RS05715 () | 1289033..1289818 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IUD22_RS05720 () | 1289855..1292461 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| IUD22_RS05725 () | 1292894..1293625 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| IUD22_RS05730 () | 1293705..1294565 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| IUD22_RS05735 () | 1294770..1295588 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| IUD22_RS05745 () | 1296361..1296705 | - | 345 | WP_004084923.1 | RidA family protein | - |
| IUD22_RS05750 () | 1296908..1297240 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| IUD22_RS05755 () | 1297432..1298514 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| IUD22_RS05760 () | 1298505..1298723 | - | 219 | WP_004088371.1 | tail protein X | - |
| IUD22_RS05765 () | 1298720..1299202 | - | 483 | WP_011097928.1 | phage tail protein | - |
| IUD22_RS05770 () | 1299199..1301418 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| IUD22_RS05775 () | 1301545..1301832 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| IUD22_RS05780 () | 1301835..1302344 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| IUD22_RS05785 () | 1302344..1303522 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| IUD22_RS05790 () | 1303587..1305179 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| IUD22_RS05795 () | 1305187..1305744 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD22_RS05800 () | 1305737..1306629 | - | 893 | Protein_1123 | baseplate J/gp47 family protein | - |
| IUD22_RS05805 () | 1306629..1306967 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD22_RS05810 () | 1307117..1307380 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IUD22_RS05815 () | 1307367..1307648 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| IUD22_RS05820 () | 1307685..1308272 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD22_RS05825 () | 1308269..1308811 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD22_RS05830 () | 1308787..1309308 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD22_RS05835 () | 1309305..1309628 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| IUD22_RS05840 () | 1309628..1309888 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| IUD22_RS05845 () | 1309906..1311780 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| IUD22_RS05850 () | 1311777..1313363 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| IUD22_RS05855 () | 1313360..1313911 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| IUD22_RS05860 () | 1313915..1315867 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| IUD22_RS05865 () | 1315860..1316435 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| IUD22_RS05870 () | 1316566..1316790 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| IUD22_RS05875 () | 1316792..1317253 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| IUD22_RS05880 () | 1317243..1317572 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| IUD22_RS05885 () | 1317565..1318059 | - | 495 | WP_011097941.1 | lysozyme | - |
| IUD22_RS05890 () | 1318026..1318643 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| IUD22_RS05895 () | 1319062..1321593 | - | 2532 | WP_012382624.1 | primase | - |
| IUD22_RS05900 () | 1321729..1322295 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| IUD22_RS05905 () | 1322292..1322678 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| IUD22_RS05910 () | 1322675..1323061 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| IUD22_RS05915 () | 1323058..1323342 | - | 285 | Protein_1146 | hypothetical protein | - |
| IUD22_RS05920 () | 1323557..1323827 | - | 271 | Protein_1147 | hypothetical protein | - |
| IUD22_RS05925 () | 1323824..1324081 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| IUD22_RS05930 () | 1324312..1324557 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| IUD22_RS05935 () | 1324618..1324866 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| IUD22_RS05940 () | 1324863..1325051 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| IUD22_RS05945 () | 1325105..1325671 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| IUD22_RS05950 () | 1325661..1325921 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| IUD22_RS05955 () | 1326007..1326765 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| IUD22_RS05960 () | 1326926..1327465 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| IUD22_RS05965 () | 1327488..1327697 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| IUD22_RS05970 () | 1327751..1328134 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| IUD22_RS05975 () | 1328352..1328741 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| IUD22_RS05980 () | 1328738..1329202 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| IUD22_RS05985 () | 1329259..1329741 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| IUD22_RS05990 () | 1330041..1330232 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| IUD22_RS05995 () | 1330256..1330447 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| IUD22_RS06000 () | 1330479..1330676 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| IUD22_RS06005 () | 1330663..1331160 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| IUD22_RS06010 () | 1331157..1332434 | + | 1278 | WP_012382637.1 | DUF2800 domain-containing protein | - |
| IUD22_RS06015 () | 1332434..1333000 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| IUD22_RS06020 () | 1333087..1334597 | + | 1511 | Protein_1167 | hypothetical protein | - |
| IUD22_RS06025 () | 1334599..1336779 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| IUD22_RS06030 () | 1336776..1337054 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD22_RS06035 () | 1337056..1337502 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| IUD22_RS06040 () | 1337587..1339005 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| IUD22_RS06045 () | 1339002..1339166 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| IUD22_RS06050 () | 1339159..1339416 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD22_RS06055 () | 1339406..1340425 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD22_RS06060 () | 1340789..1343380 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|