MGE detailed information
MGE type: Prophage MGE length: 23914 bp
Accession: NZ_CP064328 Location: 445936..469849 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Accession: NZ_CP064328 Location: 445936..469849 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD25_RS01775 () | 441308..443098 | + | 1791 | WP_004089284.1 | succinate dehydrogenase flavoprotein subunit | - |
| IUD25_RS01780 () | 443119..443904 | + | 786 | WP_004089282.1 | succinate dehydrogenase iron-sulfur subunit | - |
| IUD25_RS01785 () | 444025..444273 | + | 249 | WP_004089280.1 | succinate dehydrogenase assembly factor 2 | - |
| IUD25_RS01790 () | 444296..444676 | + | 381 | WP_011097604.1 | hypothetical protein | - |
| IUD25_RS01795 () | 444702..445943 | + | 1242 | WP_004089276.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| IUD25_RS01800 () | 445936..446658 | + | 723 | WP_004089270.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| IUD25_RS01805 () | 447006..449483 | + | 2478 | WP_038231910.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| IUD25_RS01810 () | 449468..450130 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| IUD25_RS01815 () | 450135..450572 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| IUD25_RS01820 () | 450590..452338 | + | 1749 | WP_004089264.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| IUD25_RS01825 () | 452335..453354 | + | 1020 | WP_004089261.1 | Tetraacyldisaccharide 4'-kinase | VF |
| IUD25_RS01830 () | 453761..454480 | - | 720 | Protein_342 | phage late control D family protein | - |
| IUD25_RS01835 () | 454380..455351 | - | 972 | WP_011097609.1 | hypothetical protein | - |
| IUD25_RS01840 () | 455359..455915 | - | 557 | Protein_344 | phage tail protein I | - |
| IUD25_RS01845 () | 455908..456801 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| IUD25_RS01850 () | 456801..457139 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD25_RS01855 () | 457337..457618 | + | 282 | WP_004090695.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD25_RS01860 () | 457629..457904 | + | 276 | WP_004085172.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| IUD25_RS01865 () | 457992..458294 | + | 303 | WP_004090696.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| IUD25_RS01870 () | 458297..458698 | + | 402 | WP_004090697.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| IUD25_RS01875 () | 458767..459354 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD25_RS01880 () | 459351..459893 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD25_RS01885 () | 459869..460390 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD25_RS01890 () | 460387..460710 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| IUD25_RS01895 () | 460710..460970 | - | 261 | WP_011097616.1 | hypothetical protein | - |
| IUD25_RS01900 () | 460988..462862 | - | 1875 | WP_011097617.1 | phage major capsid protein | - |
| IUD25_RS01905 () | 462859..463491 | - | 633 | WP_011097618.1 | phage portal protein | - |
| IUD25_RS01910 () | 463446..464006 | + | 561 | WP_080502611.1 | hypothetical protein | - |
| IUD25_RS01915 () | 464003..464281 | + | 279 | WP_011097620.1 | VRR-NUC domain-containing protein | - |
| IUD25_RS01920 () | 464283..464591 | - | 309 | WP_011097621.1 | hypothetical protein | - |
| IUD25_RS01925 () | 464676..466094 | + | 1419 | WP_011097622.1 | DEAD/DEAH box helicase | - |
| IUD25_RS01930 () | 466091..466345 | + | 255 | WP_011097623.1 | DUF4224 domain-containing protein | - |
| IUD25_RS01935 () | 466335..467354 | + | 1020 | WP_011097624.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD25_RS01940 () | 468127..468768 | + | 642 | WP_011097625.1 | Chromosome-partitioning ATPase Soj | VF |
| IUD25_RS01945 () | 468796..469272 | + | 477 | WP_004089961.1 | histidine phosphatase family protein | - |
| IUD25_RS01950 () | 469277..469849 | + | 573 | WP_011097627.1 | YceI family protein | - |
| IUD25_RS01955 () | 469846..471804 | + | 1959 | WP_011097628.1 | phospholipase D family protein | - |
| IUD25_RS01960 () | 472737..473126 | - | 390 | WP_004089975.1 | helix-turn-helix domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|