MGE detailed information
MGE type: Prophage MGE length: 46721 bp
Accession: NZ_CP064328 Location: 1293441..1340161 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Accession: NZ_CP064328 Location: 1293441..1340161 Organism: Xylella fastidiosa subsp. fastidiosa strain Bakersfield-14 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD25_RS05700 () | 1288769..1289554 | + | 786 | WP_004087362.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| IUD25_RS05705 () | 1289591..1292197 | - | 2607 | WP_004087363.1 | DNA mismatch repair protein MutS | - |
| IUD25_RS05710 () | 1292630..1293361 | - | 732 | WP_012382616.1 | monofunctional biosynthetic peptidoglycan transglycosylase | - |
| IUD25_RS05715 () | 1293441..1294301 | + | 861 | WP_004087365.1 | Hsp33 family molecular chaperone HslO | - |
| IUD25_RS05720 () | 1294506..1295324 | + | 819 | WP_173391712.1 | hypothetical protein | - |
| IUD25_RS05730 () | 1296097..1296441 | - | 345 | WP_004084923.1 | RidA family protein | - |
| IUD25_RS05735 () | 1296644..1296976 | - | 333 | WP_004088648.1 | DNA-binding transcriptional regulator | - |
| IUD25_RS05740 () | 1297168..1298250 | - | 1083 | WP_011097927.1 | phage late control D family protein | - |
| IUD25_RS05745 () | 1298241..1298459 | - | 219 | WP_004088371.1 | tail protein X | - |
| IUD25_RS05750 () | 1298456..1298938 | - | 483 | WP_011097928.1 | phage tail protein | - |
| IUD25_RS05755 () | 1298935..1301154 | - | 2220 | WP_011097929.1 | phage tail tape measure protein | - |
| IUD25_RS05760 () | 1301281..1301568 | - | 288 | WP_011097930.1 | phage tail assembly protein | - |
| IUD25_RS05765 () | 1301571..1302080 | - | 510 | WP_004086986.1 | phage major tail tube protein | - |
| IUD25_RS05770 () | 1302080..1303258 | - | 1179 | WP_011097931.1 | phage tail sheath family protein | - |
| IUD25_RS05775 () | 1303323..1304915 | - | 1593 | WP_012382617.1 | tail fiber domain-containing protein | - |
| IUD25_RS05780 () | 1304923..1305480 | - | 558 | WP_011097610.1 | phage tail protein I | - |
| IUD25_RS05785 () | 1305473..1306366 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| IUD25_RS05790 () | 1306366..1306704 | - | 339 | WP_004090694.1 | GPW/gp25 family protein | - |
| IUD25_RS05795 () | 1306854..1307117 | + | 264 | WP_004090907.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IUD25_RS05800 () | 1307104..1307385 | + | 282 | WP_004090909.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| IUD25_RS05805 () | 1307422..1308009 | - | 588 | WP_011097612.1 | phage baseplate assembly protein V | - |
| IUD25_RS05810 () | 1308006..1308548 | - | 543 | WP_011097613.1 | hypothetical protein | - |
| IUD25_RS05815 () | 1308524..1309045 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| IUD25_RS05820 () | 1309042..1309365 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| IUD25_RS05825 () | 1309365..1309625 | - | 261 | WP_012382619.1 | hypothetical protein | - |
| IUD25_RS05830 () | 1309643..1311517 | - | 1875 | WP_012382620.1 | phage major capsid protein | - |
| IUD25_RS05835 () | 1311514..1313099 | - | 1586 | Protein_1130 | phage portal protein | - |
| IUD25_RS05840 () | 1313096..1313647 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| IUD25_RS05845 () | 1313651..1315603 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| IUD25_RS05850 () | 1315596..1316171 | - | 576 | WP_011097938.1 | terminase small subunit | - |
| IUD25_RS05855 () | 1316302..1316526 | - | 225 | WP_012382622.1 | hypothetical protein | - |
| IUD25_RS05860 () | 1316528..1316989 | - | 462 | WP_011097939.1 | hypothetical protein | - |
| IUD25_RS05865 () | 1316979..1317308 | - | 330 | WP_004086884.1 | phage holin family protein | - |
| IUD25_RS05870 () | 1317301..1317795 | - | 495 | WP_011097941.1 | lysozyme | - |
| IUD25_RS05875 () | 1317762..1318379 | - | 618 | WP_011097942.1 | hypothetical protein | - |
| IUD25_RS05880 () | 1318798..1321329 | - | 2532 | WP_012382624.1 | primase | - |
| IUD25_RS05885 () | 1321465..1322031 | - | 567 | WP_011097944.1 | Bro-N domain-containing protein | - |
| IUD25_RS05890 () | 1322028..1322414 | - | 387 | WP_011097945.1 | phage antirepressor | - |
| IUD25_RS05895 () | 1322411..1322797 | - | 387 | WP_011097946.1 | hypothetical protein | - |
| IUD25_RS05900 () | 1322794..1323078 | - | 285 | Protein_1143 | hypothetical protein | - |
| IUD25_RS05905 () | 1323293..1323563 | - | 271 | Protein_1144 | hypothetical protein | - |
| IUD25_RS05910 () | 1323560..1323817 | - | 258 | WP_080729500.1 | hypothetical protein | - |
| IUD25_RS05915 () | 1324048..1324293 | - | 246 | WP_012382627.1 | hypothetical protein | - |
| IUD25_RS05920 () | 1324354..1324602 | - | 249 | WP_011097950.1 | hypothetical protein | - |
| IUD25_RS05925 () | 1324599..1324787 | - | 189 | WP_012382629.1 | hypothetical protein | - |
| IUD25_RS05930 () | 1324841..1325407 | - | 567 | WP_012382630.1 | hypothetical protein | - |
| IUD25_RS05935 () | 1325397..1325657 | - | 261 | WP_012382631.1 | helix-turn-helix domain-containing protein | - |
| IUD25_RS05940 () | 1325743..1326501 | + | 759 | WP_011097952.1 | helix-turn-helix transcriptional regulator | - |
| IUD25_RS05945 () | 1326515..1326700 | - | 186 | WP_162501647.1 | hypothetical protein | - |
| IUD25_RS05950 () | 1326662..1327201 | + | 540 | WP_011097953.1 | hypothetical protein | - |
| IUD25_RS05955 () | 1327224..1327433 | + | 210 | WP_012382632.1 | hypothetical protein | - |
| IUD25_RS05960 () | 1327487..1327870 | + | 384 | WP_012382633.1 | hypothetical protein | - |
| IUD25_RS05965 () | 1328088..1328477 | + | 390 | WP_011097955.1 | hypothetical protein | - |
| IUD25_RS05970 () | 1328474..1328938 | + | 465 | WP_011097956.1 | DUF1566 domain-containing protein | - |
| IUD25_RS05975 () | 1328995..1329477 | - | 483 | WP_004088357.1 | hypothetical protein | - |
| IUD25_RS05980 () | 1329777..1329968 | + | 192 | WP_012382634.1 | hypothetical protein | - |
| IUD25_RS05985 () | 1329992..1330183 | + | 192 | WP_012382635.1 | hypothetical protein | - |
| IUD25_RS05990 () | 1330215..1330412 | + | 198 | WP_004090711.1 | hypothetical protein | - |
| IUD25_RS05995 () | 1330399..1330896 | + | 498 | WP_012382636.1 | hypothetical protein | - |
| IUD25_RS06000 () | 1330893..1332169 | + | 1277 | Protein_1163 | DUF2800 domain-containing protein | - |
| IUD25_RS06005 () | 1332169..1332735 | + | 567 | WP_004090881.1 | DUF2815 family protein | - |
| IUD25_RS06010 () | 1332822..1334333 | + | 1512 | WP_011097960.1 | hypothetical protein | - |
| IUD25_RS06015 () | 1334335..1336515 | + | 2181 | WP_011097961.1 | DNA polymerase | - |
| IUD25_RS06020 () | 1336512..1336790 | + | 279 | WP_011097962.1 | VRR-NUC domain-containing protein | - |
| IUD25_RS06025 () | 1336792..1337238 | - | 447 | WP_012382639.1 | DUF1640 domain-containing protein | - |
| IUD25_RS06030 () | 1337323..1338741 | + | 1419 | WP_011097964.1 | DEAD/DEAH box helicase | - |
| IUD25_RS06035 () | 1338738..1338902 | + | 165 | WP_012382640.1 | hypothetical protein | - |
| IUD25_RS06040 () | 1338895..1339152 | + | 258 | WP_011097965.1 | DUF4224 domain-containing protein | - |
| IUD25_RS06045 () | 1339142..1340161 | + | 1020 | WP_011097966.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IUD25_RS06050 () | 1340525..1343116 | + | 2592 | WP_004087286.1 | bifunctional lysylphosphatidylglycerol flippase/synthetase MprF | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|