MGE detailed information
MGE type: Genomic_island MGE length: 21298 bp
Accession: NZ_CP064325 Location: 1629265..1650562 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Accession: NZ_CP064325 Location: 1629265..1650562 Organism: Xylella fastidiosa subsp. multiplex strain Red Oak Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD24_RS07230 () | 1624962..1625117 | - | 156 | WP_012337984.1 | hypothetical protein | - |
| IUD24_RS07235 () | 1625186..1625350 | - | 165 | WP_193329296.1 | hypothetical protein | - |
| IUD24_RS07240 () | 1625576..1626044 | - | 469 | Protein_1410 | glycoside hydrolase family 25 protein | - |
| IUD24_RS07245 () | 1626181..1626363 | + | 183 | WP_027700467.1 | hypothetical protein | - |
| IUD24_RS07250 () | 1626647..1627573 | - | 927 | WP_004085766.1 | Grx4 family monothiol glutaredoxin | - |
| IUD24_RS07255 () | 1627639..1628415 | + | 777 | WP_027700469.1 | polysaccharide deacetylase family protein | - |
| IUD24_RS07260 () | 1629059..1629250 | - | 192 | WP_021358405.1 | hypothetical protein | - |
| IUD24_RS07265 () | 1629668..1630087 | - | 420 | WP_004085763.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| IUD24_RS07270 () | 1630087..1630326 | - | 240 | WP_004085761.1 | ribbon-helix-helix domain-containing protein | - |
| IUD24_RS07275 () | 1630771..1631013 | + | 243 | WP_004085758.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| IUD24_RS07280 () | 1631006..1631293 | + | 288 | WP_004085905.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IUD24_RS07285 () | 1631381..1631947 | + | 567 | WP_004085755.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IUD24_RS07290 () | 1632000..1633196 | - | 1197 | WP_012337730.1 | IS607 family transposase ISCARN56 | Transposase |
| IUD24_RS07295 () | 1633190..1633816 | - | 627 | WP_038230952.1 | IS607 family transposase ISCfe1 | Transposase |
| IUD24_RS07300 () | 1634046..1635320 | - | 1275 | WP_012337985.1 | pyridoxal phosphate-dependent aminotransferase | - |
| IUD24_RS07305 () | 1635725..1637887 | + | 2163 | WP_012337986.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| IUD24_RS07310 () | 1637884..1639305 | + | 1422 | WP_004085930.1 | Hemolysin secretion protein D, plasmid | VF |
| IUD24_RS07315 () | 1639832..1640455 | + | 624 | WP_004086041.1 | hypothetical protein | - |
| IUD24_RS07320 () | 1640452..1640724 | + | 273 | WP_021358268.1 | hypothetical protein | - |
| IUD24_RS07325 () | 1640727..1641344 | + | 618 | WP_004086046.1 | hypothetical protein | - |
| IUD24_RS07330 () | 1641341..1642648 | + | 1308 | WP_012337989.1 | hypothetical protein | - |
| IUD24_RS07335 () | 1643368..1643610 | + | 243 | WP_154128367.1 | hypothetical protein | - |
| IUD24_RS07340 () | 1643700..1645433 | - | 1734 | WP_004085933.1 | hypothetical protein | - |
| IUD24_RS07350 () | 1646074..1647024 | - | 951 | WP_012337991.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| IUD24_RS07355 () | 1647083..1647586 | - | 504 | WP_004085935.1 | Lipoprotein signal peptidase | VF |
| IUD24_RS07360 () | 1647731..1650562 | - | 2832 | WP_012337992.1 | isoleucine--tRNA ligase | - |
| IUD24_RS07365 () | 1650559..1651506 | - | 948 | WP_004085938.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| IUD24_RS07370 () | 1651668..1653278 | - | 1611 | WP_004085940.1 | murein biosynthesis integral membrane protein MurJ | - |
| IUD24_RS07375 () | 1653378..1653647 | + | 270 | WP_010894866.1 | 30S ribosomal protein S20 | - |
| IUD24_RS07380 () | 1653764..1654837 | - | 1074 | WP_004085947.1 | GTPase ObgE | - |
| IUD24_RS07385 () | 1655012..1655269 | - | 258 | WP_004085949.1 | 50S ribosomal protein L27 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|