MGE detailed information
MGE type: Mobilizable plasmid MGE length: 72374 bp
Accession: NZ_CP064300 Location: 1..72374 Organism: Lacticaseibacillus paracasei subsp. tolerans strain MGB0245 Replicon: plasmid pMGB0245-1
Accession: NZ_CP064300 Location: 1..72374 Organism: Lacticaseibacillus paracasei subsp. tolerans strain MGB0245 Replicon: plasmid pMGB0245-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LacP0245_RS14740 () | 335..487 | - | 153 | WP_079351910.1 | hypothetical protein | - |
| LacP0245_RS14745 () | 469..723 | - | 255 | WP_194959268.1 | hypothetical protein | - |
| LacP0245_RS14750 () | 726..869 | - | 144 | WP_194959269.1 | hypothetical protein | - |
| LacP0245_RS14755 () | 862..1311 | - | 450 | WP_194959270.1 | nitroreductase | - |
| LacP0245_RS14760 () | 1325..1615 | - | 291 | WP_003570626.1 | hypothetical protein | - |
| LacP0245_RS14765 () | 1625..2071 | - | 447 | WP_194959271.1 | hypothetical protein | - |
| LacP0245_RS14770 () | 2556..3756 | + | 1201 | Protein_6 | IS110 family transposase ISSsu7 | Transposase |
| LacP0245_RS14775 () | 4379..4756 | + | 378 | WP_016373119.1 | hypothetical protein | - |
| LacP0245_RS14780 () | 4805..5487 | - | 683 | Protein_8 | IS256 family transposase IS1201 | Transposase |
| LacP0245_RS14785 () | 5546..6333 | + | 788 | WP_194959272.1 | IS5 family transposase ISCaa8 | Transposase |
| LacP0245_RS14790 () | 6336..6713 | + | 378 | Protein_10 | conjugal transfer protein | - |
| LacP0245_RS14795 () | 6725..7039 | + | 315 | WP_194959273.1 | nicking enzyme traa | - |
| LacP0245_RS14800 () | 7088..7492 | - | 405 | WP_016373353.1 | hypothetical protein | VF |
| LacP0245_RS14805 () | 7673..8323 | - | 651 | Protein_13 | Tn3 family transposase TnBth1 | Transposase |
| LacP0245_RS14810 () | 8426..9442 | + | 1017 | WP_094515914.1 | IS30 family transposase ISSag3 | Transposase |
| LacP0245_RS14815 () | 9458..10504 | - | 1047 | WP_194959274.1 | hypothetical protein | - |
| LacP0245_RS14820 () | 10476..11396 | - | 921 | WP_016511843.1 | IS30 family transposase ISLsa1 | Transposase |
| LacP0245_RS14825 () | 11500..12210 | - | 711 | Protein_17 | Tn3 family transposase TnBth1 | Transposase |
| LacP0245_RS14830 () | 12389..12985 | + | 597 | WP_003582117.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| LacP0245_RS14835 () | 13108..13431 | + | 324 | WP_003582114.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LacP0245_RS14840 () | 13483..15213 | + | 1731 | WP_016373382.1 | arsenical pump-driving ATPase | - |
| LacP0245_RS14845 () | 15256..16551 | + | 1296 | WP_003582109.1 | arsenic transporter | - |
| LacP0245_RS14850 () | 16588..16923 | + | 336 | WP_025013532.1 | arsenite efflux transporter metallochaperone ArsD | - |
| LacP0245_RS14855 () | 16946..17362 | + | 417 | WP_004563097.1 | arsenate reductase (thioredoxin) | - |
| LacP0245_RS14860 () | 17494..19428 | - | 1935 | WP_194959275.1 | hypothetical protein | - |
| LacP0245_RS14865 () | 19438..20385 | - | 948 | WP_126352985.1 | Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase | VF |
| LacP0245_RS14870 () | 20367..21038 | - | 672 | WP_126352983.1 | hypothetical protein | VF |
| LacP0245_RS14875 () | 21028..21678 | - | 651 | WP_002819944.1 | VTT domain-containing protein | - |
| LacP0245_RS14880 () | 21896..23254 | - | 1359 | WP_194959276.1 | HAMP domain-containing histidine kinase | - |
| LacP0245_RS14885 () | 23264..23959 | - | 696 | WP_003572018.1 | Regulator of RpoS | VF |
| LacP0245_RS14890 () | 24210..24996 | - | 787 | Protein_30 | IS5 family transposase | - |
| LacP0245_RS14895 () | 25188..25430 | + | 243 | WP_016369696.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| LacP0245_RS14900 () | 25423..25704 | + | 282 | WP_016369697.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| LacP0245_RS14905 () | 25841..26491 | + | 651 | WP_003576925.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| LacP0245_RS14910 () | 26497..26781 | + | 285 | WP_042745859.1 | BRCT domain-containing protein | - |
| LacP0245_RS14915 () | 27518..27733 | + | 216 | WP_003592982.1 | hypothetical protein | - |
| LacP0245_RS14920 () | 27857..28255 | + | 399 | WP_003597456.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| LacP0245_RS14925 () | 28350..28847 | - | 498 | Protein_37 | IS3 family transposase ISEnfa5 | Transposase |
| LacP0245_RS14930 () | 28982..29323 | + | 342 | Protein_38 | IS5 family transposase ISLrh3 | Transposase |
| LacP0245_RS14940 () | 30426..33248 | + | 2823 | WP_003587111.1 | cation-transporting P-type ATPase | - |
| LacP0245_RS14945 () | 33308..33571 | + | 264 | WP_003587109.1 | hypothetical protein | - |
| LacP0245_RS14950 () | 33646..34329 | - | 684 | WP_022669498.1 | IS6 family transposase ISBth20 | Transposase |
| LacP0245_RS14955 () | 34369..34743 | + | 375 | WP_194959277.1 | replication protein repB | - |
| LacP0245_RS14960 () | 35265..35885 | + | 621 | WP_002293047.1 | CadD family cadmium resistance transporter | - |
| LacP0245_RS14965 () | 36000..36179 | + | 180 | Protein_45 | hypothetical protein | Relaxase |
| LacP0245_RS14970 () | 36201..37025 | - | 825 | Protein_46 | IS30 family transposase ISLpl1 | Transposase |
| LacP0245_RS14975 () | 37091..37890 | + | 800 | WP_108299274.1 | IS5 family transposase | - |
| LacP0245_RS14980 () | 37897..38001 | - | 105 | Protein_48 | IS30 family transposase | - |
| LacP0245_RS14985 () | 38118..39056 | - | 939 | WP_041168824.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| LacP0245_RS14990 () | 39056..40588 | - | 1533 | WP_194853602.1 | ABC transporter permease/substrate-binding protein | - |
| LacP0245_RS14995 () | 40785..41006 | + | 222 | Protein_51 | IS3 family transposase IS153 | Transposase |
| LacP0245_RS15000 () | 41066..41355 | + | 290 | Protein_52 | IS5 family transposase ISCARN82 | Transposase |
| LacP0245_RS15005 () | 41377..41703 | + | 327 | Protein_53 | MFS transporter | - |
| LacP0245_RS15010 () | 41778..43973 | - | 2196 | WP_194959258.1 | copper-translocating P-type ATPase | - |
| LacP0245_RS15015 () | 44224..44655 | - | 432 | WP_049145455.1 | CopY/TcrY family copper transport repressor | - |
| LacP0245_RS15020 () | 44936..45723 | + | 788 | WP_194959259.1 | IS5 family transposase ISCaa8 | Transposase |
| LacP0245_RS15025 () | 46192..46548 | - | 357 | Protein_57 | replication initiation protein | - |
| LacP0245_RS15030 () | 46588..47343 | - | 756 | WP_003572050.1 | iron export ABC transporter permease subunit FetB | - |
| LacP0245_RS15035 () | 47340..47990 | - | 651 | WP_003572052.1 | ATP-binding cassette domain-containing protein | - |
| LacP0245_RS15040 () | 48036..48278 | - | 243 | WP_003572054.1 | IS3 family transposase ISRgn1 | Transposase |
| LacP0245_RS15045 () | 48483..49166 | + | 684 | WP_194959260.1 | IS6 family transposase ISBth20 | Transposase |
| LacP0245_RS15050 () | 49228..50244 | - | 1017 | Protein_62 | reverse transcriptase | - |
| LacP0245_RS15055 () | 50734..51521 | + | 788 | WP_194959172.1 | IS5 family transposase ISCaa8 | Transposase |
| LacP0245_RS15060 () | 51594..51914 | + | 321 | WP_194959171.1 | IS5 family transposase ISCARN82 | Transposase |
| LacP0245_RS15065 () | 51839..52381 | + | 543 | WP_194959245.1 | IS5 family transposase ISCaa8 | Transposase |
| LacP0245_RS15070 () | 52454..53241 | + | 788 | WP_100216635.1 | IS5 family transposase ISCaa8 | Transposase |
| LacP0245_RS15075 () | 53248..53724 | + | 477 | Protein_67 | IS6 family transposase | - |
| LacP0245_RS15080 () | 53790..55616 | - | 1827 | WP_033574026.1 | cadmium-translocating P-type ATPase | - |
| LacP0245_RS15085 () | 55988..56257 | - | 270 | Protein_69 | PTS sugar transporter subunit IIC | - |
| LacP0245_RS15090 () | 56321..57007 | - | 687 | WP_126353762.1 | IS6 family transposase ISLgar4 | Transposase |
| LacP0245_RS15095 () | 57222..58703 | - | 1482 | WP_071253019.1 | primase C-terminal domain-containing protein | - |
| LacP0245_RS15100 () | 59248..60063 | + | 816 | WP_016368704.1 | AAA family ATPase | - |
| LacP0245_RS15105 () | 60065..60409 | + | 345 | WP_016383917.1 | hypothetical protein | - |
| LacP0245_RS15110 () | 60586..60930 | + | 345 | WP_071253020.1 | hypothetical protein | - |
| LacP0245_RS15115 () | 60881..61180 | + | 300 | WP_016368707.1 | hypothetical protein | - |
| LacP0245_RS15120 () | 61246..61932 | - | 687 | Protein_76 | IS6 family transposase ISSau6 | Transposase |
| LacP0245_RS15125 () | 62021..63031 | + | 1011 | WP_194959261.1 | hypothetical protein | VF |
| LacP0245_RS15130 () | 63047..63691 | + | 645 | WP_194959262.1 | hypothetical protein | - |
| LacP0245_RS15135 () | 63688..64095 | + | 408 | WP_147793410.1 | thioredoxin family protein | - |
| LacP0245_RS15140 () | 64085..64906 | + | 822 | WP_194959263.1 | hypothetical protein | - |
| LacP0245_RS15145 () | 65501..65701 | + | 201 | WP_016375147.1 | hypothetical protein | - |
| LacP0245_RS15150 () | 65698..65955 | + | 258 | WP_016370734.1 | hypothetical protein | - |
| LacP0245_RS15155 () | 65994..66431 | + | 438 | WP_194959264.1 | hypothetical protein | - |
| LacP0245_RS15160 () | 66424..67668 | + | 1245 | WP_194959265.1 | hypothetical protein | Relaxase |
| LacP0245_RS15165 () | 67710..67955 | + | 246 | WP_194959266.1 | hypothetical protein | - |
| LacP0245_RS15170 () | 67942..70482 | + | 2541 | WP_194959267.1 | DUF3991 domain-containing protein | - |
| LacP0245_RS15175 () | 70821..70964 | + | 144 | WP_016368657.1 | putative holin-like toxin | - |
| LacP0245_RS15180 () | 71165..72370 | + | 1206 | WP_019891225.1 | IS110 family transposase ISSsu7 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|