MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 88171 bp
Accession: NZ_CP064265 Location: 1..88171 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LT7 Replicon: plasmid pSLT7_2
Accession: NZ_CP064265 Location: 1..88171 Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain LT7 Replicon: plasmid pSLT7_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITP16_RS23750 () | 454..1485 | + | 1032 | WP_001690254.1 | replication initiation protein | - |
| ITP16_RS23755 () | 2393..2662 | + | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| ITP16_RS23760 () | 2659..2940 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ITP16_RS23765 () | 3136..3477 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| ITP16_RS23770 () | 3777..4364 | + | 588 | WP_024189984.1 | serine acetyltransferase | - |
| ITP16_RS23775 () | 4646..5239 | - | 594 | WP_000517696.1 | hypothetical protein | - |
| ITP16_RS23780 () | 5593..6939 | + | 1347 | WP_032082920.1 | hypothetical protein | - |
| ITP16_RS23785 () | 7218..9098 | + | 1881 | WP_052979469.1 | colicin | - |
| ITP16_RS23790 () | 9120..9455 | - | 336 | WP_001080730.1 | colicin 1A immunity protein | - |
| ITP16_RS23795 () | 9584..9931 | + | 348 | WP_000142441.1 | hypothetical protein | - |
| ITP16_RS23800 () | 9949..10539 | - | 591 | WP_000194574.1 | hypothetical protein | - |
| ITP16_RS23805 () | 10539..10796 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| ITP16_RS23810 () | 11365..11778 | + | 414 | WP_001690258.1 | hypothetical protein | - |
| ITP16_RS23815 () | 11780..12559 | + | 780 | WP_052971527.1 | site-specific integrase | - |
| ITP16_RS23820 () | 12740..13384 | + | 645 | WP_001144036.1 | ParA family protein | - |
| ITP16_RS23825 () | 13471..13779 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| ITP16_RS23830 () | 14193..15173 | + | 981 | WP_000688519.1 | plasmid segregation protein ParM | - |
| ITP16_RS23835 () | 15166..15582 | + | 417 | WP_194946669.1 | plasmid partitioning/stability family protein | - |
| ITP16_RS23840 () | 15584..16858 | - | 1275 | WP_194946670.1 | Y-family DNA polymerase | - |
| ITP16_RS23845 () | 16858..17295 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ITP16_RS23850 () | 17292..17540 | - | 249 | WP_000618111.1 | DinI-like family protein | - |
| ITP16_RS23855 () | 17958..18860 | + | 903 | WP_077790361.1 | DUF1281 domain-containing protein | - |
| ITP16_RS23860 () | 18857..19168 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| ITP16_RS23865 () | 19244..19927 | + | 684 | WP_000086149.1 | DNA methylase | - |
| ITP16_RS23870 () | 19928..20149 | + | 222 | WP_023210871.1 | hypothetical protein | - |
| ITP16_RS23875 () | 20163..20597 | + | 435 | WP_023210870.1 | DUF1380 family protein | - |
| ITP16_RS23880 () | 20643..21419 | + | 777 | WP_023210869.1 | hypothetical protein | - |
| ITP16_RS23885 () | 21833..22258 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| ITP16_RS23890 () | 22305..22727 | + | 423 | WP_015058200.1 | DUF1380 family protein | - |
| ITP16_RS23895 () | 22724..22915 | + | 192 | WP_023210868.1 | hypothetical protein | - |
| ITP16_RS23900 () | 23248..23316 | - | 69 | Protein_30 | pilus protein | - |
| ITP16_RS23905 () | 23685..24212 | + | 528 | WP_001276114.1 | single-stranded DNA-binding protein | - |
| ITP16_RS23910 () | 24270..24503 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| ITP16_RS23915 () | 24562..26520 | + | 1959 | WP_194946671.1 | ParB/RepB/Spo0J family partition protein | - |
| ITP16_RS23920 () | 26575..27009 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| ITP16_RS23925 () | 27006..27725 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| ITP16_RS23930 () | 27855..29030 | + | 1176 | WP_023210867.1 | transposase | - |
| ITP16_RS23935 () | 29478..29978 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| ITP16_RS23940 () | 30707..31141 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| ITP16_RS23945 () | 31234..31500 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| ITP16_RS23950 () | 31565..32455 | + | 891 | WP_053289965.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| ITP16_RS23955 () | 32455..32736 | + | 282 | WP_168994714.1 | hypothetical protein | - |
| ITP16_RS23960 () | 32767..33018 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| ITP16_RS23965 () | 33052..33249 | - | 198 | Protein_43 | hypothetical protein | - |
| ITP16_RS23970 () | 33598..34446 | + | 849 | WP_001077033.1 | DUF4942 domain-containing protein | - |
| ITP16_RS23975 () | 34532..34867 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| ITP16_RS23980 () | 35101..35433 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| ITP16_RS23985 () | 35444..38143 | + | 2700 | WP_010891268.1 | IncI1-type relaxase NikB | - |
| ITP16_RS23990 () | 38180..40471 | - | 2292 | WP_001289276.1 | hypothetical protein | - |
| ITP16_RS23995 () | 40464..41534 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| ITP16_RS24000 () | 41553..42761 | - | 1209 | WP_194946672.1 | IncI1-type conjugal transfer protein TrbA | - |
| ITP16_RS24005 () | 43053..43205 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| ITP16_RS24010 () | 43277..43528 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| ITP16_RS24015 () | 44452..44628 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| ITP16_RS24020 () | 45020..45229 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| ITP16_RS24025 () | 45301..45963 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ITP16_RS24030 () | 46034..48202 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| ITP16_RS24035 () | 48299..48883 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| ITP16_RS24040 () | 48912..50114 | - | 1203 | WP_001697941.1 | IncI1-type conjugal transfer protein TraW | - |
| ITP16_RS24045 () | 50081..50695 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| ITP16_RS24050 () | 50695..53739 | - | 3045 | WP_097735579.1 | IncI1-type conjugal transfer protein TraU | - |
| ITP16_RS24055 () | 53829..54629 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| ITP16_RS24060 () | 54613..54801 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| ITP16_RS24065 () | 54865..55269 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| ITP16_RS24070 () | 55320..55847 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| ITP16_RS24075 () | 55847..56551 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| ITP16_RS24080 () | 56551..57840 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| ITP16_RS24085 () | 57843..58826 | - | 984 | WP_001191879.1 | IncI1-type conjugal transfer protein TraN | - |
| ITP16_RS24090 () | 58837..59529 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| ITP16_RS24095 () | 59526..59873 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| ITP16_RS24100 () | 59891..63657 | - | 3767 | Protein_70 | DNA primase | - |
| ITP16_RS24105 () | 63747..64298 | - | 552 | WP_000014584.1 | phospholipase D family protein | - |
| ITP16_RS24110 () | 64313..64603 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| ITP16_RS24115 () | 64600..65748 | - | 1149 | WP_052979471.1 | plasmid transfer ATPase TraJ | - |
| ITP16_RS24120 () | 65745..66563 | - | 819 | WP_000646095.1 | IncI1-type conjugal transfer lipoprotein TraI | - |
| ITP16_RS24125 () | 66560..67018 | - | 459 | WP_001079808.1 | IncI1-type conjugal transfer lipoprotein TraH | - |
| ITP16_RS24130 () | 67413..67997 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| ITP16_RS24135 () | 68057..69259 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| ITP16_RS24140 () | 69345..70169 | - | 825 | WP_001545755.1 | hypothetical protein | - |
| ITP16_RS24145 () | 70320..71474 | - | 1155 | WP_001139958.1 | integrase | - |
| ITP16_RS24150 () | 72727..72903 | - | 177 | WP_096040819.1 | shufflon protein C' | - |
| ITP16_RS24155 () | 73235..74323 | - | 1089 | Protein_81 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| ITP16_RS24160 () | 74323..74979 | - | 657 | WP_001193549.1 | prepilin peptidase | - |
| ITP16_RS24165 () | 74964..75524 | - | 561 | WP_000014005.1 | lytic transglycosylase domain-containing protein | - |
| ITP16_RS24170 () | 75534..76148 | - | 615 | WP_000908226.1 | type IV prepilin | - |
| ITP16_RS24175 () | 76165..77250 | - | 1086 | WP_001208802.1 | type II secretion system F family protein | - |
| ITP16_RS24180 () | 77263..78816 | - | 1554 | WP_000362206.1 | Flp pilus assembly complex ATPase component TadA | - |
| ITP16_RS24185 () | 78827..79279 | - | 453 | WP_001247337.1 | type IV pilus biogenesis protein PilP | - |
| ITP16_RS24190 () | 79266..80561 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| ITP16_RS24195 () | 80554..82236 | - | 1683 | WP_000748143.1 | PilN family type IVB pilus formation outer membrane protein | - |
| ITP16_RS24200 () | 82250..82687 | - | 438 | WP_000539807.1 | type IV pilus biogenesis protein PilM | - |
| ITP16_RS24205 () | 82687..83754 | - | 1068 | WP_001360287.1 | type IV pilus biogenesis lipoprotein PilL | - |
| ITP16_RS24210 () | 84726..85100 | - | 375 | WP_001136188.1 | PilI type IV pilus biogenesis protein | - |
| ITP16_RS24215 () | 85272..85955 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| ITP16_RS24220 () | 86209..86742 | - | 534 | WP_001372168.1 | transcription termination factor NusG | - |
| ITP16_RS24225 () | 87184..87471 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| ITP16_RS24230 () | 87389..87652 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|