MGE detailed information
MGE type: Conjugative plasmid MGE length: 102456 bp
Accession: NZ_CP064254 Location: 1..102456 Organism: Klebsiella pneumoniae strain JX-CR-hvKP-1 Replicon: plasmid pJX1-2
Accession: NZ_CP064254 Location: 1..102456 Organism: Klebsiella pneumoniae strain JX-CR-hvKP-1 Replicon: plasmid pJX1-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IS496_RS28080 () | 140..460 | - | 321 | WP_001447108.1 | hypothetical protein | - |
| IS496_RS28085 () | 576..818 | - | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| IS496_RS28090 () | 899..1042 | - | 144 | WP_000176500.1 | hypothetical protein | - |
| IS496_RS28095 () | 1309..1971 | - | 663 | WP_005082527.1 | hypothetical protein | - |
| IS496_RS28100 () | 2111..2752 | - | 642 | WP_194813330.1 | transcription termination factor NusG | - |
| IS496_RS28105 () | 3455..4327 | + | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| IS496_RS28110 () | 5232..5516 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| IS496_RS28115 () | 5516..5791 | + | 276 | WP_000421257.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IS496_RS28120 () | 5956..6237 | + | 282 | WP_001105066.1 | hypothetical protein | - |
| IS496_RS28125 () | 6428..6694 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| IS496_RS28130 () | 6832..7434 | - | 603 | WP_000521606.1 | hypothetical protein | - |
| IS496_RS28135 () | 7610..8662 | - | 1053 | WP_000655519.1 | hypothetical protein | - |
| IS496_RS28140 () | 8875..9465 | - | 591 | WP_001401589.1 | hypothetical protein | - |
| IS496_RS28145 () | 9465..9719 | - | 255 | WP_000343106.1 | hypothetical protein | - |
| IS496_RS28150 () | 9987..11486 | + | 1500 | WP_001297030.1 | RES family NAD+ phosphorylase | - |
| IS496_RS28155 () | 11511..12374 | - | 864 | WP_000654832.1 | hypothetical protein | - |
| IS496_RS28160 () | 12897..13310 | + | 414 | WP_000465034.1 | hypothetical protein | - |
| IS496_RS28165 () | 13312..14091 | + | 780 | WP_001164196.1 | site-specific integrase | - |
| IS496_RS28170 () | 14271..14915 | + | 645 | WP_001144036.1 | ParA family protein | - |
| IS496_RS28175 () | 15002..15310 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| IS496_RS28180 () | 15724..16704 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| IS496_RS28185 () | 16697..17113 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| IS496_RS28190 () | 17115..18389 | - | 1275 | WP_000457498.1 | Y-family DNA polymerase | - |
| IS496_RS28195 () | 18389..18826 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IS496_RS28200 () | 18823..19071 | - | 249 | WP_063612146.1 | DinI-like family protein | - |
| IS496_RS28205 () | 19206..19910 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IS496_RS28210 () | 19962..20207 | - | 246 | Protein_26 | IS4 family transposase | - |
| IS496_RS28215 () | 20260..20964 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IS496_RS28220 () | 21119..21883 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| IS496_RS28225 () | 22001..22069 | - | 69 | Protein_29 | EAL domain-containing protein | - |
| IS496_RS28230 () | 22390..22890 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| IS496_RS28235 () | 23018..23857 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| IS496_RS28240 () | 23851..24198 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| IS496_RS28245 () | 24404..25192 | - | 789 | WP_000503573.1 | Streptomycin 3''-adenylyltransferase | ARG |
| IS496_RS28250 () | 25323..25796 | - | 474 | WP_001389366.1 | Dihydrofolate reductase type 1 | ARG |
| IS496_RS28255 () | 25954..26967 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| IS496_RS28260 () | 27170..27415 | + | 246 | Protein_36 | DUF3330 domain-containing protein | - |
| IS496_RS28265 () | 27480..28184 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IS496_RS28270 () | 28567..29493 | + | 927 | WP_001134362.1 | DUF1281 domain-containing protein | - |
| IS496_RS28275 () | 29490..29801 | + | 312 | WP_032159977.1 | hypothetical protein | - |
| IS496_RS28280 () | 29878..30561 | + | 684 | WP_000086159.1 | DNA methylase | - |
| IS496_RS28285 () | 30562..30783 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IS496_RS28290 () | 30797..31231 | + | 435 | WP_000274484.1 | DUF1380 family protein | - |
| IS496_RS28295 () | 31276..31890 | + | 615 | WP_001006231.1 | hypothetical protein | - |
| IS496_RS28300 () | 32305..32730 | + | 426 | WP_001198879.1 | antirestriction protein | - |
| IS496_RS28305 () | 32777..33199 | + | 423 | WP_000271719.1 | DUF1380 family protein | - |
| IS496_RS28310 () | 33196..33387 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| IS496_RS28315 () | 34157..34684 | + | 528 | WP_001297042.1 | single-stranded DNA-binding protein | - |
| IS496_RS28320 () | 34742..34975 | + | 234 | WP_000006016.1 | DUF905 domain-containing protein | - |
| IS496_RS28325 () | 35034..36992 | + | 1959 | WP_001145482.1 | ParB/RepB/Spo0J family partition protein | - |
| IS496_RS28330 () | 37047..37481 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| IS496_RS28335 () | 37478..38197 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| IS496_RS28340 () | 38194..38790 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| IS496_RS28345 () | 39252..39752 | + | 501 | WP_000117631.1 | antirestriction protein ArdA | - |
| IS496_RS28350 () | 40484..40918 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| IS496_RS28355 () | 41010..41276 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| IS496_RS28360 () | 41453..41842 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| IS496_RS28365 () | 41839..42729 | + | 891 | WP_000038332.1 | Recombination-promoting nuclease RpnA | VF |
| IS496_RS28370 () | 42729..42974 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| IS496_RS28375 () | 43005..43256 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| IS496_RS28380 () | 43290..43487 | - | 198 | WP_001161106.1 | hypothetical protein | - |
| IS496_RS28385 () | 43836..44684 | + | 849 | WP_063612069.1 | DUF4942 domain-containing protein | - |
| IS496_RS28390 () | 44769..45104 | - | 336 | WP_000157091.1 | hypothetical protein | - |
| IS496_RS28395 () | 45337..45669 | + | 333 | WP_001291058.1 | hypothetical protein | - |
| IS496_RS28400 () | 45681..48392 | + | 2712 | WP_000991387.1 | Protein TraI | Relaxase |
| IS496_RS28405 () | 48460..48891 | + | 432 | WP_001335086.1 | hypothetical protein | - |
| IS496_RS28410 () | 48989..49219 | - | 231 | WP_071591569.1 | hypothetical protein | - |
| IS496_RS28415 () | 49686..51989 | - | 2304 | WP_000077664.1 | TraM recognition domain-containing protein | - |
| IS496_RS28420 () | 51970..53094 | - | 1125 | WP_000152387.1 | DsbC family protein | - |
| IS496_RS28425 () | 53091..54398 | - | 1308 | WP_021577249.1 | IncI1-type conjugal transfer protein TrbA | - |
| IS496_RS28430 () | 55039..55290 | + | 252 | WP_001081067.1 | hypothetical protein | - |
| IS496_RS28435 () | 55353..55529 | - | 177 | WP_001054907.1 | hypothetical protein | - |
| IS496_RS28440 () | 55679..56146 | - | 468 | WP_000598962.1 | thermonuclease family protein | - |
| IS496_RS28445 () | 56305..56928 | + | 624 | WP_001155247.1 | DNA-binding protein | - |
| IS496_RS28450 () | 57126..57341 | - | 216 | WP_000266543.1 | hypothetical protein | - |
| IS496_RS28455 () | 57345..57713 | - | 369 | WP_001345852.1 | hypothetical protein | - |
| IS496_RS28460 () | 58004..58246 | - | 243 | WP_000650923.1 | hypothetical protein | - |
| IS496_RS28465 () | 58576..58728 | + | 153 | WP_001335079.1 | Hok/Gef family protein | - |
| IS496_RS28470 () | 58866..60452 | - | 1587 | WP_000004564.1 | TnsA endonuclease N-terminal domain-containing protein | - |
| IS496_RS28475 () | 60726..61373 | - | 648 | WP_015056434.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| IS496_RS28480 () | 61461..63620 | - | 2160 | WP_000691811.1 | DotA/TraY family protein | - |
| IS496_RS28485 () | 63695..64264 | - | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| IS496_RS28490 () | 64261..65466 | - | 1206 | WP_001189548.1 | conjugal transfer protein TraW | - |
| IS496_RS28495 () | 65424..66044 | - | 621 | WP_000286854.1 | hypothetical protein | - |
| IS496_RS28500 () | 66044..69088 | - | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| IS496_RS28505 () | 69383..70201 | - | 819 | WP_000753550.1 | hypothetical protein | - |
| IS496_RS28510 () | 70116..70367 | - | 252 | WP_001277573.1 | hypothetical protein | - |
| IS496_RS28515 () | 70424..70822 | - | 399 | WP_000088813.1 | hypothetical protein | - |
| IS496_RS28520 () | 70869..71396 | - | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| IS496_RS28525 () | 71396..72109 | - | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| IS496_RS28530 () | 72106..73443 | - | 1338 | WP_013307873.1 | conjugal transfer protein TraO | - |
| IS496_RS28535 () | 73447..74421 | - | 975 | WP_000547383.1 | hypothetical protein | VF |
| IS496_RS28540 () | 74432..75127 | - | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| IS496_RS28545 () | 75139..75489 | - | 351 | WP_001056367.1 | hypothetical protein | - |
| IS496_RS28550 () | 75506..79567 | - | 4062 | WP_013307874.1 | DNA primase | - |
| IS496_RS28555 () | 79921..80502 | - | 582 | WP_025750394.1 | hypothetical protein | - |
| IS496_RS28560 () | 80510..80965 | - | 456 | Protein_96 | IS5 family transposase IS903B | Transposase |
| IS496_RS28565 () | 81000..81875 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| IS496_RS28570 () | 82125..83387 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| IS496_RS28575 () | 83799..84089 | - | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| IS496_RS28580 () | 84086..85234 | - | 1149 | WP_013307876.1 | putative protein YggR | VF |
| IS496_RS28585 () | 85218..86054 | - | 837 | WP_000745049.1 | hypothetical protein | VF |
| IS496_RS28590 () | 86051..86509 | - | 459 | WP_025750398.1 | DotD/TraH family lipoprotein | - |
| IS496_RS28595 () | 86613..87815 | - | 1203 | WP_013307879.1 | conjugal transfer protein TraF | - |
| IS496_RS28600 () | 87917..88738 | - | 822 | WP_001681675.1 | hypothetical protein | - |
| IS496_RS28605 () | 88951..90075 | - | 1125 | WP_013307880.1 | site-specific integrase | - |
| IS496_RS28610 () | 90411..90782 | - | 372 | WP_194813329.1 | pilus assembly protein | - |
| IS496_RS28615 () | 91229..91606 | + | 378 | WP_052972533.1 | phage tail protein | - |
| IS496_RS28620 () | 91611..92933 | - | 1323 | WP_052993642.1 | hypothetical protein | VF |
| IS496_RS28625 () | 92951..93577 | - | 627 | WP_013307883.1 | prepilin peptidase | - |
| IS496_RS28630 () | 93593..94078 | - | 486 | WP_001080767.1 | hypothetical protein | VF |
| IS496_RS28635 () | 94123..94659 | - | 537 | WP_000111521.1 | hypothetical protein | VF |
| IS496_RS28640 () | 94721..95815 | - | 1095 | WP_032253914.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IS496_RS28645 () | 95817..97325 | - | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IS496_RS28650 () | 97429..97887 | - | 459 | WP_000095886.1 | hypothetical protein | VF |
| IS496_RS28655 () | 97877..99172 | - | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| IS496_RS28660 () | 99193..100812 | - | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| IS496_RS28665 () | 100844..101281 | - | 438 | WP_000539952.1 | hypothetical protein | VF |
| IS496_RS28670 () | 101285..102355 | - | 1071 | WP_000730430.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|