MGE detailed information
MGE type: Genomic_island MGE length: 21240 bp
Accession: NZ_CP064167 Location: 2373089..2394328 Organism: Escherichia coli O157:H7 strain Wll001 Replicon: chromosome
Accession: NZ_CP064167 Location: 2373089..2394328 Organism: Escherichia coli O157:H7 strain Wll001 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMX21_RS11850 () | 2368815..2369357 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| IMX21_RS11855 () | 2369650..2371800 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| IMX21_RS11860 () | 2371850..2372053 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| IMX21_RS11865 () | 2372064..2373020 | + | 957 | WP_001297640.1 | GTPase | - |
| IMX21_RS11870 () | 2373089..2374447 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| IMX21_RS11875 () | 2374456..2374740 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| IMX21_RS11880 () | 2375018..2377450 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| IMX21_RS11885 () | 2377517..2378986 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| IMX21_RS11890 () | 2378986..2380740 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 2380890..2380966 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 2380890..2380966 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| IMX21_RS11895 () | 2380961..2381302 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| IMX21_RS11900 () | 2381349..2382512 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| IMX21_RS11905 () | 2382560..2383441 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| IMX21_RS11910 () | 2383538..2383702 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| IMX21_RS11915 () | 2383879..2385291 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| IMX21_RS11920 () | 2385534..2385734 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| IMX21_RS11925 () | 2385739..2386491 | - | 753 | Protein_2336 | hypothetical protein | VF |
| IMX21_RS11930 () | 2386958..2388190 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| IMX21_RS11935 () | 2388231..2389502 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| IMX21_RS11940 () | 2389618..2390769 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| IMX21_RS11945 () | 2390779..2391546 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| IMX21_RS11950 () | 2391543..2391809 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| IMX21_RS11955 () | 2392121..2394328 | + | 2208 | WP_000535072.1 | hypothetical protein | VF |
| IMX21_RS11960 () | 2394594..2395436 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| IMX21_RS11965 () | 2395504..2396682 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |