MGE detailed information
MGE type: Prophage MGE length: 121699 bp
Accession: NZ_CP064118 Location: 2458561..2580259 Organism: Yersinia pestis strain C-783 Replicon: chromosome
Accession: NZ_CP064118 Location: 2458561..2580259 Organism: Yersinia pestis strain C-783 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ISU55_RS11170 () | 2455017..2455481 | + | 465 | WP_002211268.1 | hypothetical protein | - |
| ISU55_RS11175 () | 2455642..2456829 | - | 1188 | WP_002211269.1 | glycosyltransferase | - |
| ISU55_RS11180 () | 2456826..2457410 | - | 585 | WP_002211270.1 | hypothetical protein | - |
| ISU55_RS11185 () | 2457407..2458561 | - | 1155 | WP_002214329.1 | glycosyltransferase | - |
| ISU55_RS11190 () | 2458561..2459523 | - | 963 | WP_002211271.1 | NAD(P)-dependent oxidoreductase | - |
| ISU55_RS11195 () | 2459657..2460943 | - | 1287 | WP_002211273.1 | coenzyme F390 synthetase | - |
| ISU55_RS11200 () | 2460940..2461746 | - | 807 | WP_002214335.1 | MBL fold metallo-hydrolase | - |
| ISU55_RS11205 () | 2461739..2462755 | - | 1017 | WP_002211275.1 | NAD(P)-dependent oxidoreductase | - |
| ISU55_RS11210 () | 2462769..2463299 | - | 531 | WP_194545912.1 | 3-oxoacyl-ACP synthase | - |
| ISU55_RS11215 () | 2463268..2463777 | - | 510 | WP_002214339.1 | thiolase | - |
| ISU55_RS11220 () | 2464780..2466384 | + | 1605 | WP_002211277.1 | hypothetical protein | VF |
| ISU55_RS11225 () | 2466562..2467134 | - | 573 | WP_002211278.1 | HutD family protein | - |
| ISU55_RS11230 () | 2467134..2468504 | - | 1371 | WP_002232930.1 | formimidoylglutamate deiminase | - |
| ISU55_RS11235 () | 2468652..2469419 | + | 768 | WP_002211280.1 | histidine utilization repressor | - |
| ISU55_RS11240 () | 2469623..2470843 | + | 1221 | WP_002211281.1 | imidazolonepropionase | - |
| ISU55_RS11245 () | 2470840..2471646 | + | 807 | WP_002211282.1 | N-formylglutamate deformylase | - |
| ISU55_RS11250 () | 2471903..2472115 | - | 213 | Protein_2184 | porin | - |
| ISU55_RS11255 () | 2472183..2472962 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| ISU55_RS11260 () | 2472962..2473984 | - | 1023 | WP_000255944.1 | IS21 family transposase IS100kyp | Transposase |
| ISU55_RS11265 () | 2474462..2474647 | + | 186 | WP_002215428.1 | hypothetical protein | - |
| ISU55_RS11270 () | 2474663..2474887 | + | 225 | WP_002213183.1 | hypothetical protein | - |
| ISU55_RS11275 () | 2474897..2475238 | - | 342 | WP_002228531.1 | TOBE domain-containing protein | - |
| ISU55_RS11280 () | 2475124..2476014 | - | 891 | WP_002215425.1 | hypothetical protein | VF |
| ISU55_RS11285 () | 2476039..2476866 | - | 828 | WP_002213186.1 | carbohydrate ABC transporter permease | - |
| ISU55_RS11290 () | 2476859..2477719 | - | 861 | WP_002213188.1 | hypothetical protein | VF |
| ISU55_RS11295 () | 2477786..2479054 | - | 1269 | WP_002213190.1 | sugar ABC transporter substrate-binding protein | - |
| ISU55_RS11300 () | 2479084..2480097 | - | 1014 | WP_002213192.1 | Gfo/Idh/MocA family oxidoreductase | - |
| ISU55_RS11305 () | 2480759..2481556 | - | 798 | WP_002213201.1 | GntR family transcriptional regulator | - |
| ISU55_RS11310 () | 2481901..2482227 | - | 327 | Protein_2196 | DDE-type integrase/transposase/recombinase | - |
| ISU55_RS11315 () | 2482525..2482959 | + | 435 | WP_002215417.1 | hypothetical protein | - |
| ISU55_RS11320 () | 2482971..2483540 | + | 570 | WP_002213205.1 | hypothetical protein | - |
| ISU55_RS11325 () | 2483958..2485156 | - | 1199 | Protein_2199 | IS256 family transposase IS285 | Transposase |
| ISU55_RS11330 () | 2485204..2486280 | - | 1077 | WP_002213208.1 | toll/interleukin-1 receptor domain-containing protein | - |
| ISU55_RS11335 () | 2486346..2486636 | - | 291 | WP_002213209.1 | BrnA antitoxin family protein | - |
| ISU55_RS11340 () | 2486617..2486889 | - | 273 | WP_002213210.1 | BrnT family toxin | - |
| ISU55_RS11345 () | 2487025..2487279 | + | 255 | WP_002213211.1 | phage baseplate assembly protein V | - |
| ISU55_RS11350 () | 2487276..2487575 | + | 300 | WP_002213212.1 | GPW/gp25 family protein | - |
| ISU55_RS11355 () | 2487592..2487879 | + | 288 | WP_002215413.1 | hypothetical protein | - |
| ISU55_RS11360 () | 2488314..2488831 | + | 518 | Protein_2206 | DUF2778 domain-containing protein | - |
| ISU55_RS11365 () | 2489255..2489368 | + | 114 | Protein_2207 | phage tail protein | - |
| ISU55_RS11370 () | 2489443..2490956 | + | 1514 | WP_086016636.1 | IS3 family transposase ISPa74 | Transposase |
| ISU55_RS11375 () | 2491176..2491520 | + | 345 | WP_002215406.1 | hypothetical protein | VF |
| ISU55_RS11380 () | 2491546..2491734 | + | 189 | WP_002223864.1 | hypothetical protein | - |
| ISU55_RS11385 () | 2491764..2491946 | - | 183 | WP_002213223.1 | hypothetical protein | - |
| ISU55_RS11390 () | 2492138..2492311 | - | 174 | WP_002213226.1 | hypothetical protein | - |
| ISU55_RS11395 () | 2493071..2493298 | - | 228 | WP_002215401.1 | replicative DNA helicase | - |
| ISU55_RS11400 () | 2493857..2494081 | + | 225 | WP_002215398.1 | hypothetical protein | - |
| ISU55_RS11420 () | 2494664..2495212 | - | 549 | WP_002220475.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| ISU55_RS11425 () | 2495271..2497103 | - | 1833 | WP_162006966.1 | excinuclease ABC subunit UvrC | - |
| ISU55_RS11430 () | 2497096..2497752 | - | 657 | WP_002211176.1 | hypothetical protein | VF |
| ISU55_RS11435 () | 2498415..2498639 | + | 225 | WP_002211175.1 | DUF2594 family protein | - |
| ISU55_RS11440 () | 2498767..2499108 | + | 342 | WP_002218408.1 | GlpM family protein | - |
| ISU55_RS11445 () | 2499136..2499390 | - | 255 | WP_002211173.1 | hypothetical protein | - |
| ISU55_RS11450 () | 2499730..2500281 | - | 552 | WP_002211172.1 | hypothetical protein | VF |
| ISU55_RS11460 () | 2501405..2502820 | + | 1416 | WP_002211170.1 | D-serine/D-alanine/glycine transporter | - |
| ISU55_RS11465 () | 2502946..2504124 | - | 1179 | WP_002211169.1 | N-acetylneuraminate epimerase | - |
| ISU55_RS11470 () | 2504518..2505117 | + | 600 | WP_002211168.1 | NAD(P)H:quinone oxidoreductase | - |
| ISU55_RS11475 () | 2505203..2506507 | - | 1305 | WP_002211167.1 | deferrochelatase/peroxidase EfeB | - |
| ISU55_RS11480 () | 2506518..2507648 | - | 1131 | WP_002211166.1 | iron uptake system protein EfeO | - |
| ISU55_RS11485 () | 2507678..2508526 | - | 849 | WP_002211165.1 | ferrous iron permease EfeU | - |
| ISU55_RS11490 () | 2508859..2510343 | - | 1485 | WP_002211164.1 | sodium/proline symporter PutP | - |
| ISU55_RS11495 () | 2510373..2510570 | - | 198 | WP_002211163.1 | hypothetical protein | - |
| ISU55_RS11500 () | 2510915..2514886 | + | 3972 | WP_002224448.1 | trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase | - |
| ISU55_RS11505 () | 2515392..2515685 | + | 294 | WP_002211161.1 | hypothetical protein | - |
| ISU55_RS11510 () | 2515685..2516056 | + | 372 | WP_002223875.1 | transcriptional regulator | - |
| ISU55_RS11515 () | 2516348..2517109 | - | 762 | WP_002211159.1 | hypothetical protein | VF |
| ISU55_RS11520 () | 2517112..2517774 | - | 663 | WP_002211158.1 | cystine ABC transporter permease | - |
| ISU55_RS11525 () | 2517774..2518574 | - | 801 | WP_002211157.1 | cystine ABC transporter substrate-binding protein | - |
| ISU55_RS11530 () | 2518698..2519690 | - | 993 | WP_002227959.1 | D-cysteine desulfhydrase | - |
| ISU55_RS11535 () | 2519979..2520488 | - | 510 | WP_002211154.1 | hypothetical protein | VF |
| ISU55_RS11540 () | 2520710..2521432 | - | 723 | WP_002211153.1 | hypothetical protein | VF |
| ISU55_RS11545 () | 2521779..2522888 | - | 1110 | WP_002211152.1 | hypothetical protein | VF |
| ISU55_RS11550 () | 2523185..2524585 | + | 1401 | WP_002211150.1 | hypothetical protein | VF |
| ISU55_RS11555 () | 2524596..2524994 | + | 399 | WP_002211149.1 | hypothetical protein | VF |
| ISU55_RS11560 () | 2525005..2525367 | + | 363 | WP_002211148.1 | hypothetical protein | VF |
| ISU55_RS11565 () | 2525668..2526543 | + | 876 | WP_002211147.1 | AraC family transcriptional regulator | - |
| ISU55_RS11570 () | 2526897..2528810 | + | 1914 | WP_002228541.1 | hypothetical protein | - |
| ISU55_RS11575 () | 2528947..2529852 | + | 906 | WP_002228542.1 | chemotaxis protein | - |
| ISU55_RS11580 () | 2530013..2530624 | + | 612 | WP_002211145.1 | DNA-3-methyladenine glycosylase | - |
| ISU55_RS11585 () | 2530810..2531286 | - | 477 | WP_002215992.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| ISU55_RS11590 () | 2531297..2531476 | - | 180 | WP_002215991.1 | hypothetical protein | - |
| ISU55_RS11595 () | 2531627..2531794 | - | 168 | WP_002215990.1 | hypothetical protein | - |
| ISU55_RS11600 () | 2531896..2532207 | - | 312 | WP_002211144.1 | hypothetical protein | VF |
| ISU55_RS11605 () | 2532560..2534272 | + | 1713 | WP_002211143.1 | hypothetical protein | VF |
| ISU55_RS11610 () | 2534269..2535261 | + | 993 | WP_002211142.1 | hypothetical protein | VF |
| ISU55_RS11615 () | 2535254..2535970 | + | 717 | WP_002211141.1 | hypothetical protein | VF |
| ISU55_RS11620 () | 2535933..2537387 | + | 1455 | WP_002211140.1 | hypothetical protein | VF |
| ISU55_RS11625 () | 2537487..2537933 | + | 447 | WP_002211139.1 | hypothetical protein | VF |
| ISU55_RS11630 () | 2537930..2539282 | + | 1353 | WP_002211138.1 | hypothetical protein | VF |
| ISU55_RS11635 () | 2539549..2540019 | + | 471 | WP_002227961.1 | hypothetical protein | VF |
| ISU55_RS11640 () | 2540025..2541026 | + | 1002 | WP_002211135.1 | hypothetical protein | VF |
| ISU55_RS11645 () | 2541023..2541439 | + | 417 | WP_002211134.1 | hypothetical protein | VF |
| ISU55_RS11650 () | 2541439..2541975 | + | 537 | WP_002211133.1 | hypothetical protein | VF |
| ISU55_RS11655 () | 2542056..2542796 | + | 741 | WP_002220494.1 | hypothetical protein | VF |
| ISU55_RS11660 () | 2542902..2543171 | + | 270 | WP_002211131.1 | hypothetical protein | VF |
| ISU55_RS11665 () | 2543174..2543956 | + | 783 | WP_002211130.1 | hypothetical protein | VF |
| ISU55_RS11670 () | 2544163..2544345 | + | 183 | WP_002214976.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| ISU55_RS11675 () | 2544390..2544809 | + | 420 | WP_002211129.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| ISU55_RS11680 () | 2545067..2546026 | - | 960 | WP_002223882.1 | sugar kinase | - |
| ISU55_RS11685 () | 2546075..2547097 | - | 1023 | WP_002214974.1 | ABC transporter permease | - |
| ISU55_RS11690 () | 2547100..2548677 | - | 1578 | WP_002211126.1 | hypothetical protein | VF |
| ISU55_RS11695 () | 2548743..2549738 | - | 996 | WP_002211125.1 | substrate-binding domain-containing protein | - |
| ISU55_RS11700 () | 2549781..2550860 | - | 1080 | WP_002211124.1 | ABC transporter permease | - |
| ISU55_RS11705 () | 2550990..2553056 | - | 2067 | WP_002211122.1 | hypothetical protein | VF |
| ISU55_RS11710 () | 2553274..2554275 | + | 1002 | WP_002211121.1 | sugar-binding transcriptional regulator | - |
| ISU55_RS11715 () | 2554304..2555284 | - | 981 | WP_002211120.1 | hypothetical protein | VF |
| ISU55_RS11720 () | 2555423..2557087 | - | 1665 | WP_002211119.1 | hypothetical protein | VF |
| ISU55_RS11725 () | 2557958..2558902 | - | 945 | WP_002211118.1 | hypothetical protein | VF |
| ISU55_RS11730 () | 2558902..2560011 | - | 1110 | WP_002211117.1 | hypothetical protein | VF |
| ISU55_RS11735 () | 2560026..2560715 | - | 690 | WP_002211116.1 | hypothetical protein | VF |
| ISU55_RS11740 () | 2560859..2561569 | - | 711 | Protein_2278 | hypothetical protein | VF |
| ISU55_RS11745 () | 2561562..2562167 | - | 606 | Protein_2279 | hypothetical protein | VF |
| ISU55_RS11750 () | 2562189..2563475 | - | 1287 | WP_002211113.1 | hypothetical protein | VF |
| ISU55_RS11755 () | 2563677..2564354 | - | 678 | WP_002211112.1 | hypothetical protein | VF |
| ISU55_RS11760 () | 2564369..2564773 | - | 405 | WP_002211111.1 | hypothetical protein | VF |
| ISU55_RS11765 () | 2564779..2565192 | - | 414 | WP_002211110.1 | hypothetical protein | VF |
| ISU55_RS11770 () | 2565431..2566129 | + | 699 | WP_002227966.1 | hypothetical protein | VF |
| ISU55_RS11775 () | 2566280..2566582 | + | 303 | WP_002211108.1 | hypothetical protein | VF |
| ISU55_RS11780 () | 2566601..2567041 | + | 441 | WP_002211107.1 | hypothetical protein | VF |
| ISU55_RS11785 () | 2567231..2569285 | - | 2055 | Protein_2287 | hypothetical protein | VF |
| ISU55_RS11790 () | 2569393..2569851 | - | 459 | WP_002213759.1 | IS200-IS605 family transposase IS200G | Transposase |
| ISU55_RS11795 () | 2569997..2570851 | - | 855 | Protein_2289 | hypothetical protein | VF |
| ISU55_RS11800 () | 2571509..2571931 | - | 423 | WP_002211101.1 | hypothetical protein | VF |
| ISU55_RS11805 () | 2571931..2574009 | - | 2079 | WP_002211100.1 | hypothetical protein | VF |
| ISU55_RS11810 () | 2574009..2575169 | - | 1161 | WP_002211099.1 | hypothetical protein | VF |
| ISU55_RS11815 () | 2575701..2576159 | + | 459 | WP_002211098.1 | hypothetical protein | - |
| ISU55_RS11820 () | 2576153..2576479 | + | 327 | WP_002211097.1 | DUF1493 family protein | - |
| - () | 2576738..2576832 | + | 95 | - | - | Antitoxin Detail |
| - () | 2576739..2576832 | - | 94 | - | - | Toxin Detail |
| ISU55_RS11825 () | 2577002..2577343 | - | 342 | WP_002211095.1 | YebY family protein | - |
| ISU55_RS11830 () | 2577440..2578324 | - | 885 | WP_002211094.1 | copper homeostasis membrane protein CopD | - |
| ISU55_RS11835 () | 2578327..2578713 | - | 387 | WP_002211093.1 | CopC domain-containing protein YobA | - |
| ISU55_RS11840 () | 2579119..2579628 | - | 510 | WP_002211092.1 | non-heme ferritin | - |
| ISU55_RS11845 () | 2580029..2580259 | + | 231 | WP_140270001.1 | DNA polymerase III subunit theta | - |
| ISU55_RS11850 () | 2580319..2581269 | - | 951 | WP_002211090.1 | prolyl aminopeptidase | - |
| ISU55_RS11855 () | 2581991..2584042 | - | 2052 | WP_002211088.1 | S9 family peptidase | - |
| ISU55_RS11860 () | 2584352..2584777 | - | 426 | WP_002211087.1 | protein YebF | - |
| ISU55_RS11865 () | 2584869..2585177 | - | 309 | WP_002211086.1 | N(4)-acetylcytidine aminohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|