MGE detailed information
MGE type: Conjugative plasmid MGE length: 86173 bp
Accession: NZ_CP064107 Location: 1..86173 Organism: Escherichia coli strain IR53017 Replicon: plasmid unnamed4
Accession: NZ_CP064107 Location: 1..86173 Organism: Escherichia coli strain IR53017 Replicon: plasmid unnamed4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ISU84_RS27160 () | 1224..2348 | + | 1125 | WP_000152382.1 | DsbC family protein | - |
| ISU84_RS27165 () | 2329..4629 | + | 2301 | WP_013307869.1 | TraM recognition domain-containing protein | - |
| ISU84_RS27170 () | 4850..7570 | - | 2721 | WP_000991405.1 | Protein TraI | Relaxase |
| ISU84_RS27175 () | 7582..7914 | - | 333 | WP_001291057.1 | hypothetical protein | - |
| ISU84_RS27180 () | 8147..8482 | + | 336 | WP_000157090.1 | hypothetical protein | - |
| ISU84_RS27185 () | 8568..9416 | - | 849 | WP_013307867.1 | DUF4942 domain-containing protein | - |
| ISU84_RS27190 () | 9765..9962 | + | 198 | Protein_7 | hypothetical protein | - |
| ISU84_RS27195 () | 9996..10247 | + | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| ISU84_RS27200 () | 10278..10523 | - | 246 | WP_001260882.1 | hypothetical protein | - |
| ISU84_RS27205 () | 10523..11413 | - | 891 | WP_000038343.1 | Recombination-promoting nuclease RpnA | VF |
| ISU84_RS27210 () | 11410..11799 | - | 390 | WP_000833767.1 | hypothetical protein | - |
| ISU84_RS27215 () | 11976..12242 | - | 267 | WP_001247860.1 | hypothetical protein | - |
| ISU84_RS27220 () | 12335..12769 | - | 435 | WP_000218862.1 | hypothetical protein | - |
| ISU84_RS27225 () | 12967..13362 | + | 396 | WP_179799942.1 | hypothetical protein | - |
| ISU84_RS27230 () | 13502..14002 | - | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| ISU84_RS27235 () | 14464..15060 | - | 597 | WP_169513473.1 | hypothetical protein | - |
| ISU84_RS27240 () | 15057..15776 | - | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| ISU84_RS27245 () | 15773..16207 | - | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| ISU84_RS27250 () | 16262..18220 | - | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| ISU84_RS27255 () | 18279..18512 | - | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| ISU84_RS27260 () | 18570..19097 | - | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| ISU84_RS27265 () | 19466..19534 | + | 69 | Protein_22 | pilus protein | - |
| ISU84_RS27270 () | 19867..20058 | - | 192 | WP_001703906.1 | hypothetical protein | - |
| ISU84_RS27275 () | 20055..20477 | - | 423 | WP_013307864.1 | DUF1380 family protein | - |
| ISU84_RS27280 () | 20524..20826 | - | 303 | WP_001666994.1 | antirestriction protein | - |
| ISU84_RS27285 () | 21364..22139 | - | 776 | Protein_26 | hypothetical protein | - |
| ISU84_RS27290 () | 22184..22738 | - | 555 | WP_077635412.1 | DUF1380 family protein | - |
| ISU84_RS27295 () | 22632..22853 | - | 222 | WP_001104871.1 | hypothetical protein | - |
| ISU84_RS27300 () | 22854..23537 | - | 684 | WP_001401756.1 | DNA methylase | - |
| ISU84_RS27305 () | 23613..23925 | - | 313 | Protein_30 | hypothetical protein | - |
| ISU84_RS27310 () | 23922..24824 | - | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| ISU84_RS27315 () | 25243..25491 | + | 249 | WP_000618110.1 | DinI-like family protein | - |
| ISU84_RS27320 () | 25488..25925 | + | 438 | WP_000109062.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| ISU84_RS27325 () | 25925..27196 | + | 1272 | WP_000457510.1 | Y-family DNA polymerase | - |
| ISU84_RS27330 () | 27400..28026 | + | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| ISU84_RS27335 () | 28023..28325 | + | 303 | WP_001245884.1 | hypothetical protein | - |
| ISU84_RS27340 () | 28636..29340 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ISU84_RS27345 () | 29475..29570 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| ISU84_RS27350 () | 29696..30433 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| ISU84_RS27355 () | 30378..30548 | + | 171 | WP_170852050.1 | rRNA adenine methyltransferase | - |
| ISU84_RS27360 () | 31063..31512 | + | 450 | WP_013362817.1 | hypothetical protein | - |
| ISU84_RS27365 () | 31473..31814 | + | 342 | WP_023909256.1 | 60 kDa chaperonin 2 | VF |
| ISU84_RS27370 () | 32041..33573 | + | 1533 | WP_013362816.1 | IS91 family transposase ISVsa3 | Transposase |
| ISU84_RS27375 () | 33896..34600 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| ISU84_RS27380 () | 34932..36278 | - | 1347 | WP_001132021.1 | hypothetical protein | - |
| ISU84_RS27385 () | 36632..37225 | + | 594 | WP_001401779.1 | hypothetical protein | - |
| ISU84_RS27390 () | 37507..38094 | - | 588 | WP_001418189.1 | serine acetyltransferase | - |
| ISU84_RS27395 () | 38394..38735 | + | 342 | WP_000578011.1 | hypothetical protein | - |
| ISU84_RS27400 () | 38931..39212 | - | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ISU84_RS27405 () | 39209..39478 | - | 270 | WP_000079932.1 | hypothetical protein | Antitoxin Detail |
| ISU84_RS27410 () | 39533..39691 | - | 159 | WP_000829588.1 | hypothetical protein | - |
| ISU84_RS27415 () | 40386..41258 | - | 873 | WP_000729438.1 | incFII family plasmid replication initiator RepA | - |
| ISU84_RS27420 () | 41961..42602 | + | 642 | WP_021515453.1 | hypothetical protein | - |
| ISU84_RS27425 () | 42742..43404 | + | 663 | WP_005082527.1 | hypothetical protein | - |
| ISU84_RS27430 () | 43671..43814 | + | 144 | WP_000176500.1 | hypothetical protein | - |
| ISU84_RS27435 () | 43895..44137 | + | 243 | WP_021515452.1 | PilI type IV pilus biogenesis protein | - |
| ISU84_RS27440 () | 44253..44573 | + | 321 | WP_001447108.1 | hypothetical protein | - |
| ISU84_RS27445 () | 44814..45884 | + | 1071 | WP_000730430.1 | hypothetical protein | VF |
| ISU84_RS27450 () | 45888..46325 | + | 438 | WP_000539952.1 | hypothetical protein | VF |
| ISU84_RS27455 () | 46357..47976 | + | 1620 | WP_001035562.1 | Outer membrane lipoprotein BfpB | VF |
| ISU84_RS27460 () | 47997..49292 | + | 1296 | WP_000129883.1 | type 4b pilus protein PilO2 | - |
| ISU84_RS27465 () | 49282..49740 | + | 459 | WP_000095886.1 | hypothetical protein | VF |
| ISU84_RS27470 () | 49844..51352 | + | 1509 | WP_000880806.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| ISU84_RS27475 () | 51354..52448 | + | 1095 | WP_032253914.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| ISU84_RS27480 () | 52510..53046 | + | 537 | WP_000111521.1 | hypothetical protein | VF |
| ISU84_RS27485 () | 53091..53576 | + | 486 | WP_052979773.1 | hypothetical protein | VF |
| ISU84_RS27490 () | 53592..54218 | + | 627 | WP_000939245.1 | prepilin peptidase | - |
| ISU84_RS27495 () | 54236..55597 | + | 1362 | WP_001168171.1 | hypothetical protein | VF |
| ISU84_RS27500 () | 56070..56891 | + | 822 | WP_001681675.1 | hypothetical protein | - |
| ISU84_RS27505 () | 56993..58195 | + | 1203 | WP_000979993.1 | conjugal transfer protein TraF | - |
| ISU84_RS27510 () | 58299..58757 | + | 459 | WP_001170111.1 | DotD/TraH family lipoprotein | - |
| ISU84_RS27515 () | 58754..59590 | + | 837 | WP_089502857.1 | hypothetical protein | VF |
| ISU84_RS27520 () | 59574..60722 | + | 1149 | WP_000775210.1 | putative protein YggR | VF |
| ISU84_RS27525 () | 60719..61009 | + | 291 | WP_000817801.1 | IcmT/TraK family protein | - |
| ISU84_RS27530 () | 61073..65134 | + | 4062 | WP_061103460.1 | DNA primase | - |
| ISU84_RS27535 () | 65151..65501 | + | 351 | WP_001056367.1 | hypothetical protein | - |
| ISU84_RS27540 () | 65513..66208 | + | 696 | WP_001681668.1 | DotI/IcmL family type IV secretion protein | - |
| ISU84_RS27545 () | 66219..67178 | + | 960 | WP_061103461.1 | hypothetical protein | VF |
| ISU84_RS27550 () | 67182..68513 | + | 1332 | WP_052984758.1 | conjugal transfer protein TraO | - |
| ISU84_RS27555 () | 68510..69223 | + | 714 | WP_000787003.1 | conjugal transfer protein TraP | - |
| ISU84_RS27560 () | 69223..69750 | + | 528 | WP_001407937.1 | conjugal transfer protein TraQ | - |
| ISU84_RS27565 () | 69797..70195 | + | 399 | WP_000088813.1 | hypothetical protein | - |
| ISU84_RS27570 () | 70252..70503 | + | 252 | WP_001277573.1 | hypothetical protein | - |
| ISU84_RS27575 () | 70418..71236 | + | 819 | WP_072108035.1 | conjugal transfer protein TraT | - |
| ISU84_RS27580 () | 71291..71650 | + | 360 | WP_000380400.1 | hypothetical protein | - |
| ISU84_RS27585 () | 71650..72030 | + | 381 | WP_000690881.1 | hypothetical protein | - |
| ISU84_RS27590 () | 72003..72548 | - | 546 | WP_001390888.1 | hypothetical protein | - |
| ISU84_RS27595 () | 72773..75817 | + | 3045 | WP_001024766.1 | conjugal transfer protein | - |
| ISU84_RS27600 () | 75817..76437 | + | 621 | WP_000286854.1 | hypothetical protein | - |
| ISU84_RS27605 () | 76395..77600 | + | 1206 | WP_001189547.1 | conjugal transfer protein TraW | - |
| ISU84_RS27610 () | 77597..78166 | + | 570 | WP_000650752.1 | conjugal transfer protein TraX | - |
| ISU84_RS27615 () | 78241..80406 | + | 2166 | WP_000691812.1 | DotA/TraY family protein | - |
| ISU84_RS27620 () | 80495..81145 | + | 651 | WP_001044247.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| ISU84_RS27625 () | 81772..81924 | - | 153 | WP_001302699.1 | Hok/Gef family protein | - |
| ISU84_RS27630 () | 82254..82496 | + | 243 | WP_000650923.1 | hypothetical protein | - |
| ISU84_RS27635 () | 82584..82775 | + | 192 | WP_000751583.1 | hypothetical protein | - |
| ISU84_RS27640 () | 82787..83155 | + | 369 | WP_001345852.1 | hypothetical protein | - |
| ISU84_RS27645 () | 83159..83374 | + | 216 | WP_000266543.1 | hypothetical protein | - |
| ISU84_RS27650 () | 83572..84195 | - | 624 | WP_001155247.1 | DNA-binding protein | - |
| ISU84_RS27655 () | 84354..84821 | + | 468 | WP_000598962.1 | thermonuclease family protein | - |
| ISU84_RS27660 () | 84971..85147 | + | 177 | WP_001054907.1 | hypothetical protein | - |
| ISU84_RS27665 () | 85210..85461 | - | 252 | WP_001081067.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|