MGE detailed information
MGE type: Prophage MGE length: 32636 bp
Accession: NZ_CP064041 Location: 2757018..2789653 Organism: Vibrio parahaemolyticus strain XMO116 Replicon: chromosome
Accession: NZ_CP064041 Location: 2757018..2789653 Organism: Vibrio parahaemolyticus strain XMO116 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9J98_RS13015 (H9J98_12895) | 2752652..2754316 | + | 1665 | WP_005456006.1 | DNA repair protein RecN | - |
| H9J98_RS13020 (H9J98_12900) | 2754556..2754915 | + | 360 | WP_005455981.1 | outer membrane protein assembly factor BamE | - |
| H9J98_RS13025 (H9J98_12905) | 2755015..2755362 | - | 348 | WP_005456005.1 | RnfH family protein | - |
| H9J98_RS13030 (H9J98_12910) | 2755352..2755795 | - | 444 | WP_005381641.1 | SRPBCC family protein | - |
| H9J98_RS13035 (H9J98_12915) | 2755914..2756399 | + | 486 | WP_005455975.1 | SsrA-binding protein SmpB | - |
| H9J98_RS13045 (H9J98_12925) | 2757018..2758244 | + | 1227 | WP_228086008.1 | integrase domain-containing protein | - |
| H9J98_RS13050 (H9J98_12930) | 2758642..2758920 | + | 279 | WP_000115789.1 | AlpA family phage regulatory protein | - |
| H9J98_RS13055 (H9J98_12935) | 2759058..2761478 | + | 2421 | WP_228086007.1 | hypothetical protein | - |
| H9J98_RS13060 (H9J98_12940) | 2761646..2764090 | + | 2445 | WP_248339830.1 | DEAD/DEAH box helicase family protein | - |
| H9J98_RS13065 (H9J98_12945) | 2764158..2764814 | - | 657 | WP_228086021.1 | site-specific DNA-methyltransferase | - |
| H9J98_RS13070 (H9J98_12950) | 2765488..2765853 | - | 366 | WP_228086020.1 | elongation factor Ts | - |
| H9J98_RS13075 (H9J98_12955) | 2765929..2766078 | + | 150 | WP_017790133.1 | hypothetical protein | - |
| H9J98_RS13080 (H9J98_12960) | 2766239..2766637 | - | 399 | WP_228086019.1 | hypothetical protein | - |
| H9J98_RS13085 (H9J98_12965) | 2766803..2768293 | + | 1491 | WP_228086018.1 | N-6 DNA methylase | - |
| H9J98_RS13090 (H9J98_12970) | 2768293..2770050 | + | 1758 | WP_228086017.1 | restriction endonuclease subunit S | - |
| H9J98_RS13095 (H9J98_12975) | 2770053..2771048 | + | 996 | WP_222771436.1 | hypothetical protein | - |
| H9J98_RS13100 (H9J98_12980) | 2771978..2772949 | - | 972 | WP_248339834.1 | hypothetical protein | - |
| H9J98_RS13105 (H9J98_12985) | 2773151..2773741 | - | 591 | WP_025795013.1 | recombinase family protein | - |
| H9J98_RS13110 (H9J98_12990) | 2774262..2775470 | - | 1209 | WP_001352368.1 | IS4-like element ISVsa5 family transposase | - |
| H9J98_RS13115 (H9J98_12995) | 2775710..2775997 | - | 288 | WP_043854181.1 | hypothetical protein | - |
| H9J98_RS13120 (H9J98_13000) | 2776680..2777219 | + | 540 | WP_062851245.1 | hypothetical protein | - |
| H9J98_RS13125 (H9J98_13005) | 2777497..2778156 | - | 660 | WP_040111191.1 | hypothetical protein | - |
| H9J98_RS13130 (H9J98_13010) | 2778153..2780141 | - | 1989 | WP_040111190.1 | AAA family ATPase | - |
| H9J98_RS13135 (H9J98_13015) | 2782913..2783299 | + | 387 | WP_062851243.1 | hypothetical protein | - |
| H9J98_RS13140 (H9J98_13020) | 2783916..2784698 | + | 783 | WP_031428771.1 | metallophosphoesterase | - |
| H9J98_RS13145 (H9J98_13025) | 2785189..2786550 | + | 1362 | WP_062851242.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| H9J98_RS13150 (H9J98_13030) | 2786535..2787017 | + | 483 | WP_029786578.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| H9J98_RS13155 (H9J98_13035) | 2787800..2788363 | - | 564 | WP_015296308.1 | porin family protein | - |
| H9J98_RS13160 (H9J98_13040) | 2788763..2789653 | + | 891 | WP_045607387.1 | LysR family transcriptional regulator | - |
| H9J98_RS13165 (H9J98_13045) | 2789789..2791321 | + | 1533 | WP_005464264.1 | bifunctional GNAT family N-acetyltransferase/carbon-nitrogen hydrolase family protein | - |
| H9J98_RS13170 (H9J98_13050) | 2791544..2792131 | + | 588 | WP_031791282.1 | DedA family protein | - |
| H9J98_RS13175 (H9J98_13055) | 2792298..2793665 | + | 1368 | WP_045607388.1 | Na+/H+ antiporter NhaC family protein | - |
| H9J98_RS13180 (H9J98_13060) | 2793741..2794580 | - | 840 | WP_068864776.1 | 3-keto-5-aminohexanoate cleavage protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|