MGE detailed information
MGE type: Integron MGE length: 35844 bp
Accession: NZ_CP064041 Location: 1465102..1500945 Organism: Vibrio parahaemolyticus strain XMO116 Replicon: chromosome
Accession: NZ_CP064041 Location: 1465102..1500945 Organism: Vibrio parahaemolyticus strain XMO116 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H9J98_RS06870 (H9J98_06830) | 1460327..1461100 | - | 774 | WP_191685979.1 | hypothetical protein | - |
| H9J98_RS06875 (H9J98_06835) | 1461115..1461957 | - | 843 | WP_222133748.1 | hypothetical protein | - |
| H9J98_RS06880 (H9J98_06840) | 1462100..1463512 | - | 1413 | WP_228096254.1 | tyrosine-type recombinase/integrase | - |
| H9J98_RS06885 | 1463620..1463685 | + | 66 | Protein_1277 | DUF3265 domain-containing protein | - |
| H9J98_RS06890 (H9J98_06845) | 1463777..1464622 | + | 846 | WP_025633678.1 | hypothetical protein | - |
| H9J98_RS06900 (H9J98_06850) | 1465250..1465504 | + | 255 | WP_248339875.1 | hypothetical protein | - |
| H9J98_RS06905 (H9J98_06855) | 1465608..1466816 | + | 1209 | WP_001352368.1 | IS4 family transposase IS10R | Transposase |
| H9J98_RS06910 (H9J98_06860) | 1466963..1467646 | + | 684 | WP_248339877.1 | hypothetical protein | - |
| H9J98_RS06915 (H9J98_06865) | 1467661..1467753 | + | 93 | WP_080279148.1 | DUF3265 domain-containing protein | - |
| H9J98_RS06920 (H9J98_06870) | 1467795..1468421 | + | 627 | WP_025794195.1 | Leucine efflux protein | VF |
| H9J98_RS06925 (H9J98_06875) | 1468605..1469477 | + | 873 | WP_042773052.1 | hypothetical protein | - |
| H9J98_RS06930 (H9J98_06880) | 1469516..1469608 | + | 93 | WP_079857019.1 | DUF3265 domain-containing protein | - |
| H9J98_RS06935 (H9J98_06885) | 1470189..1470479 | + | 291 | WP_079751593.1 | YkgJ family cysteine cluster protein | - |
| H9J98_RS06940 (H9J98_06890) | 1471153..1471629 | + | 477 | WP_029836910.1 | GNAT family N-acetyltransferase | - |
| H9J98_RS06945 (H9J98_06895) | 1471647..1471736 | + | 90 | WP_079855467.1 | DUF3265 domain-containing protein | - |
| H9J98_RS06950 (H9J98_06900) | 1471700..1472128 | + | 429 | WP_248339879.1 | NAD(P)H-dependent oxidoreductase | - |
| H9J98_RS06955 (H9J98_06905) | 1472279..1473247 | + | 969 | WP_228070219.1 | hypothetical protein | - |
| H9J98_RS06960 | 1473269..1473361 | + | 93 | WP_225874573.1 | DUF3265 domain-containing protein | - |
| H9J98_RS06965 (H9J98_06910) | 1473517..1474710 | + | 1194 | WP_079758064.1 | ISL3 family transposase ISAba43 | Transposase |
| H9J98_RS06970 (H9J98_06915) | 1474672..1475073 | - | 402 | WP_228070207.1 | hypothetical protein | - |
| H9J98_RS06975 (H9J98_06920) | 1475479..1475646 | + | 168 | WP_001883086.1 | DUF3265 domain-containing protein | - |
| H9J98_RS06980 (H9J98_06925) | 1475692..1476342 | + | 651 | WP_193262784.1 | hypothetical protein | - |
| H9J98_RS06985 | 1476655..1476861 | + | 207 | Protein_1296 | hypothetical protein | - |
| H9J98_RS06990 (H9J98_06930) | 1477034..1477789 | + | 756 | WP_222133763.1 | Abi-alpha family protein | - |
| H9J98_RS06995 (H9J98_06935) | 1477804..1477896 | + | 93 | WP_079751685.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07000 (H9J98_06940) | 1477929..1478423 | + | 495 | WP_054868420.1 | GNAT family N-acetyltransferase | - |
| H9J98_RS07005 (H9J98_06945) | 1479319..1479435 | + | 117 | WP_202934879.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07010 (H9J98_06950) | 1479468..1479851 | - | 384 | WP_222133425.1 | YkgJ family cysteine cluster protein | - |
| H9J98_RS07015 (H9J98_06955) | 1480087..1481556 | + | 1470 | WP_222133426.1 | hypothetical protein | - |
| H9J98_RS07020 (H9J98_06960) | 1481580..1481672 | + | 93 | WP_080252015.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07025 | 1482154..1482228 | + | 75 | Protein_1304 | DUF3265 domain-containing protein | - |
| H9J98_RS07030 (H9J98_06965) | 1482312..1482896 | + | 585 | WP_222133792.1 | hypothetical protein | - |
| H9J98_RS07035 (H9J98_06970) | 1482923..1483015 | + | 93 | WP_077200619.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07040 (H9J98_06975) | 1483043..1483570 | + | 528 | WP_222133793.1 | hypothetical protein | - |
| H9J98_RS07045 (H9J98_06980) | 1483585..1483677 | + | 93 | WP_193782422.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07050 (H9J98_06985) | 1483704..1484135 | + | 432 | WP_069529177.1 | hypothetical protein | - |
| H9J98_RS07055 (H9J98_06990) | 1484281..1484811 | + | 531 | WP_222133794.1 | hypothetical protein | - |
| H9J98_RS07060 (H9J98_06995) | 1484826..1484918 | + | 93 | WP_222133795.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07065 (H9J98_07000) | 1484947..1485222 | + | 276 | WP_140392203.1 | hypothetical protein | - |
| H9J98_RS07070 | 1485213..1485275 | + | 63 | Protein_1313 | DUF3265 domain-containing protein | - |
| H9J98_RS07075 (H9J98_07005) | 1485385..1486395 | + | 1011 | WP_228070210.1 | 5'-nucleotidase | - |
| H9J98_RS07080 (H9J98_07010) | 1486519..1487424 | - | 906 | WP_228086022.1 | nucleotide-binding protein | - |
| H9J98_RS07085 (H9J98_07015) | 1487492..1488235 | + | 744 | WP_222133692.1 | hypothetical protein | - |
| H9J98_RS07090 (H9J98_07020) | 1488493..1488813 | + | 321 | WP_023623373.1 | hypothetical protein | - |
| H9J98_RS07095 (H9J98_07025) | 1489028..1489318 | + | 291 | WP_079751593.1 | YkgJ family cysteine cluster protein | - |
| H9J98_RS07100 (H9J98_07030) | 1490529..1490618 | + | 90 | WP_228070216.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07105 (H9J98_07035) | 1490718..1490903 | - | 186 | WP_161609157.1 | hypothetical protein | - |
| H9J98_RS07110 (H9J98_07040) | 1491032..1491121 | + | 90 | WP_075984309.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07115 (H9J98_07045) | 1491149..1491655 | + | 507 | WP_228070213.1 | hypothetical protein | - |
| H9J98_RS07120 (H9J98_07050) | 1491676..1491768 | + | 93 | WP_228070214.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07125 (H9J98_07055) | 1491797..1492228 | + | 432 | WP_222133640.1 | NUDIX domain-containing protein | - |
| H9J98_RS07130 (H9J98_07060) | 1492772..1492861 | + | 90 | WP_222133641.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07135 (H9J98_07065) | 1493447..1494130 | + | 684 | WP_069529237.1 | hypothetical protein | - |
| H9J98_RS07140 (H9J98_07070) | 1494158..1494250 | + | 93 | WP_079751132.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07145 (H9J98_07075) | 1494773..1494862 | + | 90 | WP_071881309.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07150 (H9J98_07080) | 1494890..1495444 | + | 555 | WP_053319305.1 | YkgJ family cysteine cluster protein | - |
| H9J98_RS07155 (H9J98_07085) | 1495605..1496039 | + | 435 | WP_100088283.1 | GNAT family N-acetyltransferase | - |
| H9J98_RS07160 (H9J98_07090) | 1496166..1496510 | + | 345 | WP_176296810.1 | hypothetical protein | - |
| H9J98_RS07165 (H9J98_07095) | 1496513..1496962 | + | 450 | WP_176296809.1 | hypothetical protein | - |
| H9J98_RS07170 (H9J98_07100) | 1496977..1497069 | + | 93 | WP_222133812.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07175 (H9J98_07105) | 1497684..1498130 | + | 447 | WP_031817701.1 | GNAT family N-acetyltransferase | - |
| H9J98_RS07180 (H9J98_07110) | 1498268..1498546 | - | 279 | WP_053312146.1 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | Toxin Detail |
| H9J98_RS07185 (H9J98_07115) | 1498543..1498827 | - | 285 | WP_053312147.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| H9J98_RS07190 (H9J98_07120) | 1499029..1499850 | + | 822 | WP_020840798.1 | DUF2002 family protein | - |
| H9J98_RS07195 (H9J98_07125) | 1499970..1500446 | + | 477 | WP_029836910.1 | GNAT family N-acetyltransferase | - |
| H9J98_RS07200 (H9J98_07130) | 1500464..1500553 | + | 90 | WP_079855467.1 | DUF3265 domain-containing protein | - |
| H9J98_RS07205 (H9J98_07135) | 1500517..1500945 | + | 429 | WP_248339879.1 | NAD(P)H-dependent oxidoreductase | - |
| H9J98_RS07210 (H9J98_07140) | 1501173..1502714 | + | 1542 | WP_248339881.1 | IS21 family transposase | - |
| H9J98_RS07215 (H9J98_07145) | 1502730..1503482 | + | 753 | WP_248339883.1 | IS21-like element helper ATPase IstB | - |
| H9J98_RS07220 (H9J98_07150) | 1503690..1504223 | + | 534 | WP_069534360.1 | hypothetical protein | - |
| H9J98_RS07225 | 1504470..1504677 | + | 208 | Protein_1344 | hypothetical protein | - |
| H9J98_RS07230 | 1505303..1505377 | + | 75 | Protein_1345 | DUF3265 domain-containing protein | - |
| H9J98_RS07235 (H9J98_07155) | 1505522..1505800 | + | 279 | WP_038886177.1 | hypothetical protein | - |
| H9J98_RS07240 (H9J98_07160) | 1505818..1505907 | + | 90 | WP_071881309.1 | DUF3265 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|