MGE detailed information
MGE type: Genomic_island MGE length: 18841 bp
Accession: NZ_CP063983 Location: 4377048..4395888 Organism: Escherichia coli strain 25DN Replicon: chromosome
Accession: NZ_CP063983 Location: 4377048..4395888 Organism: Escherichia coli strain 25DN Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IR210_RS20945 () | 4373074..4373799 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| IR210_RS20950 () | 4373836..4374375 | - | 540 | WP_194446062.1 | type 1 fimbrial protein | - |
| IR210_RS20955 () | 4374440..4374988 | - | 549 | WP_194446063.1 | type 1 fimbrial major subunit FimA | - |
| IR210_RS20960 () | 4375467..4376063 | - | 597 | WP_000044711.1 | type 1 fimbria switch DNA invertase FimE | - |
| IR210_RS20965 () | 4376541..4376948 | - | 408 | Protein_4109 | type 1 fimbria switch DNA invertase FimB | - |
| IR210_RS20970 () | 4377048..4377566 | + | 519 | WP_000115885.1 | hypothetical protein | VF |
| IR210_RS20975 () | 4377575..4378804 | + | 1230 | Protein_4111 | ISL3 family transposase ISEc53 | Transposase |
| IR210_RS20980 () | 4378832..4379035 | - | 204 | Protein_4112 | type 1 fimbria switch DNA invertase FimB | - |
| IR210_RS20985 () | 4380489..4381205 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| IR210_RS20990 () | 4381225..4382331 | + | 1107 | WP_194446064.1 | N-acetylneuraminate epimerase | - |
| IR210_RS20995 () | 4382395..4383375 | + | 981 | WP_000991462.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| IR210_RS21000 () | 4383958..4385001 | - | 1044 | WP_001363826.1 | hypothetical protein | - |
| IR210_RS21005 () | 4385127..4386273 | + | 1147 | Protein_4117 | IS3 family transposase ISEc52 | Transposase |
| IR210_RS21010 () | 4386306..4386470 | + | 165 | Protein_4118 | GNAT family N-acetyltransferase | - |
| IR210_RS21015 () | 4386847..4387104 | + | 258 | WP_001054379.1 | YjhX family toxin | Toxin Detail |
| IR210_RS21020 () | 4387116..4387667 | + | 552 | WP_194446065.1 | N-acetyltransferase | Antitoxin Detail |
| IR210_RS21025 () | 4387719..4388465 | + | 747 | WP_000354249.1 | class I SAM-dependent methyltransferase | - |
| IR210_RS21030 () | 4388593..4388853 | + | 261 | WP_000077645.1 | hypothetical protein | - |
| IR210_RS21035 () | 4388891..4389007 | + | 117 | Protein_4123 | VOC family protein | - |
| IR210_RS21040 () | 4389252..4390373 | + | 1122 | WP_000010833.1 | M42 family metallopeptidase | - |
| IR210_RS21045 () | 4390370..4390648 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB | - |
| IR210_RS21050 () | 4390660..4391973 | + | 1314 | WP_000460845.1 | galactitol-specific PTS transporter subunit IIC | - |
| IR210_RS21055 () | 4391986..4392792 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| IR210_RS21060 () | 4392923..4393354 | + | 432 | WP_000606405.1 | PTS sugar transporter subunit IIA | - |
| IR210_RS21065 () | 4393366..4393998 | + | 633 | WP_000600624.1 | ribulose-phosphate 3 epimerase family protein | - |
| IR210_RS21070 () | 4394015..4394797 | + | 783 | WP_000082779.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| IR210_RS21075 () | 4395100..4395888 | + | 789 | WP_000251800.1 | IclR family transcriptional regulator | - |
| IR210_RS21080 () | 4395893..4396798 | + | 906 | WP_194446066.1 | dihydrodipicolinate synthase family protein | - |
| IR210_RS21085 () | 4396809..4398776 | + | 1968 | WP_000116325.1 | xylonate dehydratase YjhG | - |
| IR210_RS21090 () | 4398883..4400232 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|