MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 58468 bp
Accession: NZ_CP063775 Location: 1..58468 Organism: Escherichia coli O25b:H4-ST131 Replicon: plasmid pHK02-1
Accession: NZ_CP063775 Location: 1..58468 Organism: Escherichia coli O25b:H4-ST131 Replicon: plasmid pHK02-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| INT78_RS24505 () | 1..978 | + | 978 | WP_000361610.1 | RepB family plasmid replication initiator protein | - |
| INT78_RS24510 () | 1263..2003 | - | 741 | WP_001066941.1 | tyrosine-type recombinase/integrase | - |
| INT78_RS24515 () | 2124..2312 | - | 189 | WP_001309252.1 | hypothetical protein | - |
| INT78_RS24520 () | 2679..3848 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| INT78_RS24525 () | 4074..4249 | - | 176 | Protein_4 | IS3 family transposase | - |
| INT78_RS24530 () | 4695..4967 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| INT78_RS24535 () | 5492..5928 | - | 437 | Protein_6 | IS3 family transposase IS2 | Transposase |
| INT78_RS24540 () | 6210..8180 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| INT78_RS24545 () | 8187..8978 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| INT78_RS24550 () | 9041..9649 | - | 609 | Protein_9 | IS66 family transposase ISEc22 | Transposase |
| INT78_RS24555 () | 9717..10496 | - | 780 | WP_001323403.1 | IS21 family transposase IS100kyp | Transposase |
| INT78_RS24560 () | 10496..11518 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| INT78_RS24565 () | 11604..12549 | - | 946 | Protein_12 | IS66 family transposase ISEc8 | Transposase |
| INT78_RS24570 () | 12598..12945 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| INT78_RS24575 () | 12942..13346 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| INT78_RS24580 () | 13375..13758 | - | 384 | Protein_15 | IS3 family transposase IS629 | Transposase |
| INT78_RS24585 () | 13848..15356 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| INT78_RS24590 () | 16029..16768 | - | 740 | Protein_17 | IS3 family transposase IS629 | Transposase |
| INT78_RS24595 () | 16794..17099 | + | 306 | Protein_18 | IS91 family transposase ISSbo1 | Transposase |
| INT78_RS24600 () | 17325..18029 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| INT78_RS24605 () | 18082..18678 | + | 597 | Protein_20 | IS4-like element ISVsa5 family transposase | - |
| INT78_RS24610 () | 18788..19594 | + | 807 | Protein_21 | IS4 family transposase IS10R | Transposase |
| INT78_RS24615 () | 19646..20350 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| INT78_RS24620 () | 20474..22087 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| INT78_RS24625 () | 22835..22993 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 23037..23077 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 23037..23077 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 23037..23077 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 23037..23077 | - | 41 | NuclAT_1 | - | Antitoxin Detail |
| - () | 24521..24707 | - | 187 | NuclAT_0 | - | - |
| - () | 24521..24707 | - | 187 | NuclAT_0 | - | - |
| - () | 24521..24707 | - | 187 | NuclAT_0 | - | - |
| - () | 24521..24707 | - | 187 | NuclAT_0 | - | - |
| INT78_RS24635 () | 24719..25438 | - | 720 | WP_001276232.1 | plasmid SOS inhibition protein A | - |
| INT78_RS24640 () | 25435..25869 | - | 435 | WP_000845940.1 | conjugation system SOS inhibitor PsiB | - |
| INT78_RS24645 () | 25924..27882 | - | 1959 | WP_000117179.1 | ParB/RepB/Spo0J family partition protein | - |
| INT78_RS24650 () | 27948..28181 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| INT78_RS24655 () | 28244..28783 | - | 540 | WP_000290841.1 | single-stranded DNA-binding protein | - |
| INT78_RS24660 () | 29426..29650 | - | 225 | WP_016238251.1 | hypothetical protein | - |
| INT78_RS24665 () | 29676..30239 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| INT78_RS24670 () | 30287..31648 | - | 1362 | WP_000170714.1 | DUF3560 domain-containing protein | - |
| INT78_RS24675 () | 31700..31930 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| INT78_RS24680 () | 32965..33156 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| INT78_RS24685 () | 33153..33575 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| INT78_RS24690 () | 33622..33924 | - | 303 | WP_001671341.1 | antirestriction protein | - |
| INT78_RS24695 () | 34464..35240 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| INT78_RS24700 () | 35291..35725 | - | 435 | WP_000274437.1 | DUF1380 family protein | - |
| INT78_RS24705 () | 35739..35960 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| INT78_RS24710 () | 35961..36644 | - | 684 | WP_000086185.1 | DNA methylase | - |
| INT78_RS24715 () | 36721..37025 | - | 305 | Protein_42 | hypothetical protein | - |
| INT78_RS24720 () | 37029..37931 | - | 903 | WP_001348615.1 | DUF1281 domain-containing protein | - |
| INT78_RS24725 () | 38798..39769 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| INT78_RS24730 () | 39769..40935 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| INT78_RS24735 () | 41523..42278 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| INT78_RS24740 () | 43052..43858 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| INT78_RS24745 () | 43859..44164 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| INT78_RS24750 () | 44166..44384 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| INT78_RS24755 () | 45092..46087 | + | 996 | WP_000246636.1 | hypothetical protein | - |
| INT78_RS24760 () | 46091..47023 | + | 933 | WP_000991832.1 | hypothetical protein | - |
| INT78_RS24765 () | 47160..47857 | - | 698 | Protein_52 | IS1 family transposase IS1R | Transposase |
| INT78_RS24770 () | 47891..49393 | - | 1503 | WP_194332810.1 | type I restriction-modification system subunit M | - |
| INT78_RS24775 () | 49576..49797 | + | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| INT78_RS24780 () | 49797..50177 | + | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| INT78_RS24785 () | 50182..50361 | + | 180 | WP_001513661.1 | hypothetical protein | - |
| INT78_RS24790 () | 50389..50748 | + | 360 | WP_001513660.1 | hypothetical protein | - |
| INT78_RS24795 () | 50672..51085 | + | 414 | Protein_58 | IS3 family transposase ISLad1 | Transposase |
| INT78_RS24800 () | 51035..51352 | - | 318 | WP_001513659.1 | hypothetical protein | - |
| INT78_RS24805 () | 51580..52596 | - | 1017 | WP_012372828.1 | IS5 family transposase IS5D | Transposase |
| INT78_RS24810 () | 52804..54207 | + | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| INT78_RS24815 () | 54194..55126 | + | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| INT78_RS24820 () | 55235..55564 | - | 330 | Protein_63 | TOBE domain-containing protein | - |
| INT78_RS24825 () | 55580..56277 | - | 698 | Protein_64 | IS1 family transposase IS1R | Transposase |
| INT78_RS24830 () | 56335..56583 | + | 249 | Protein_65 | abortive infection family protein | - |
| INT78_RS24835 () | 56952..57683 | - | 732 | WP_001617898.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|