MGE detailed information
MGE type: Genomic_island MGE length: 47112 bp
Accession: NZ_CP063773 Location: 4390040..4437151 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Accession: NZ_CP063773 Location: 4390040..4437151 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQ281_RS19640 () | 4385070..4385489 | - | 420 | WP_194430406.1 | flagellar protein FlhE | - |
| IQ281_RS19645 () | 4385486..4387570 | - | 2085 | WP_180777790.1 | flagellar biosynthesis protein FlhA | - |
| IQ281_RS19650 () | 4387563..4388714 | - | 1152 | WP_180777788.1 | flagellar type III secretion system protein FlhB | - |
| IQ281_RS19655 () | 4388958..4389602 | - | 645 | WP_015840808.1 | protein phosphatase CheZ | - |
| IQ281_RS19660 () | 4389612..4390001 | - | 390 | WP_015840809.1 | chemotaxis response regulator CheY | - |
| IQ281_RS19665 () | 4390040..4391092 | - | 1053 | WP_015840810.1 | Chemotaxis response regulator protein-glutamate methylesterase | VF |
| IQ281_RS19670 () | 4391092..4391964 | - | 873 | WP_014915918.1 | hypothetical protein | VF |
| IQ281_RS19675 () | 4392481..4394166 | - | 1686 | WP_194430407.1 | hypothetical protein | VF |
| IQ281_RS19680 () | 4394302..4394799 | - | 498 | WP_010279509.1 | hypothetical protein | VF |
| IQ281_RS19685 () | 4394831..4396840 | - | 2010 | WP_194431800.1 | hypothetical protein | VF |
| IQ281_RS19690 () | 4396880..4397932 | - | 1053 | WP_180777781.1 | hypothetical protein | VF |
| IQ281_RS19695 () | 4397929..4398816 | - | 888 | WP_015840814.1 | hypothetical protein | VF |
| IQ281_RS19700 () | 4398951..4399529 | - | 579 | WP_015840815.1 | Flagellar transcriptional regulator FlhC | VF |
| IQ281_RS19705 () | 4399533..4399883 | - | 351 | WP_015840816.1 | Flagellar transcriptional regulator FlhD | VF |
| IQ281_RS19710 () | 4400693..4401655 | - | 963 | WP_181828894.1 | DMT family transporter | - |
| IQ281_RS19715 () | 4401936..4403657 | + | 1722 | WP_015840818.1 | hypothetical protein | VF |
| IQ281_RS19720 () | 4403719..4403922 | - | 204 | WP_015840819.1 | protein DsrB | - |
| IQ281_RS19725 () | 4404133..4405548 | + | 1416 | WP_194430408.1 | diguanylate cyclase | - |
| IQ281_RS19730 () | 4405821..4406039 | + | 219 | WP_181848682.1 | KTSC domain-containing protein | - |
| IQ281_RS19735 () | 4406267..4406623 | + | 357 | WP_194430409.1 | hypothetical protein | - |
| IQ281_RS19740 () | 4407161..4407565 | - | 405 | WP_194430410.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IQ281_RS19745 () | 4407565..4407795 | - | 231 | WP_005974492.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IQ281_RS19750 () | 4407889..4408722 | - | 834 | WP_194430411.1 | DUF4942 domain-containing protein | - |
| IQ281_RS19755 () | 4408840..4409160 | - | 321 | WP_194430412.1 | TA system toxin CbtA family protein | Toxin Detail |
| IQ281_RS19760 () | 4409229..4409564 | - | 336 | WP_194430413.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IQ281_RS19765 () | 4409604..4410077 | - | 474 | WP_194430414.1 | DNA repair protein RadC | - |
| IQ281_RS19770 () | 4410200..4410550 | - | 351 | WP_194430415.1 | hypothetical protein | - |
| IQ281_RS19775 () | 4410608..4411441 | - | 834 | WP_194430416.1 | hypothetical protein | - |
| IQ281_RS19780 () | 4411588..4411746 | - | 159 | WP_155242703.1 | hypothetical protein | - |
| IQ281_RS19785 () | 4411930..4412817 | - | 888 | WP_194430417.1 | 50S ribosome-binding GTPase | - |
| IQ281_RS19790 () | 4412913..4413944 | - | 1032 | WP_194430418.1 | hypothetical protein | - |
| IQ281_RS19795 () | 4414715..4415305 | + | 591 | WP_194430419.1 | inovirus-type Gp2 protein | - |
| IQ281_RS19800 () | 4415410..4415622 | + | 213 | WP_044205785.1 | AlpA family transcriptional regulator | - |
| IQ281_RS19805 () | 4415713..4416138 | + | 426 | WP_072101173.1 | hypothetical protein | - |
| IQ281_RS19810 () | 4416292..4416873 | + | 582 | WP_194430420.1 | hypothetical protein | - |
| IQ281_RS19815 () | 4417137..4418591 | + | 1455 | WP_194430421.1 | hypothetical protein | VF |
| IQ281_RS19820 () | 4418632..4419165 | + | 534 | WP_194430422.1 | transcriptional regulator | - |
| IQ281_RS19825 () | 4419265..4419959 | + | 695 | Protein_3867 | IS1 family transposase | - |
| IQ281_RS19830 () | 4420513..4421499 | + | 987 | WP_107170909.1 | DNA (cytosine-5-)-methyltransferase | - |
| IQ281_RS19835 () | 4421496..4423859 | + | 2364 | WP_194430423.1 | ATP-binding protein | - |
| IQ281_RS19840 () | 4423888..4425543 | + | 1656 | WP_194430424.1 | DEAD/DEAH box helicase family protein | - |
| IQ281_RS19845 () | 4425540..4426118 | + | 579 | WP_107170907.1 | hypothetical protein | - |
| IQ281_RS19850 () | 4426121..4426582 | + | 462 | WP_194430425.1 | DNA mismatch endonuclease Vsr | - |
| IQ281_RS19855 () | 4426820..4427440 | + | 621 | Protein_3873 | transposase family protein | - |
| IQ281_RS19860 () | 4427501..4428757 | - | 1257 | WP_194430426.1 | hypothetical protein ; Integrase | Integrase |
| IQ281_RS19880 () | 4429394..4429942 | - | 549 | WP_010279374.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| IQ281_RS19885 () | 4430001..4431833 | - | 1833 | WP_194430427.1 | excinuclease ABC subunit UvrC | - |
| IQ281_RS19890 () | 4431826..4432482 | - | 657 | WP_010279369.1 | Transcriptional regulatory protein RcsB | VF |
| IQ281_RS19895 () | 4433126..4433350 | + | 225 | WP_015840869.1 | DUF2594 family protein | - |
| IQ281_RS19900 () | 4433443..4433730 | - | 288 | WP_015840870.1 | hypothetical protein | - |
| IQ281_RS19910 () | 4434635..4436047 | + | 1413 | WP_181828957.1 | D-serine/D-alanine/glycine transporter | - |
| IQ281_RS19915 () | 4436219..4436485 | - | 267 | WP_015840872.1 | anti-adapter protein IraP | - |
| IQ281_RS19920 () | 4436882..4437151 | - | 270 | Protein_3882 | HTH-type transcriptional regulator ArgP | VF |
| IQ281_RS19930 () | 4437976..4439148 | + | 1173 | WP_194430428.1 | dienelactone hydrolase family protein | - |
| IQ281_RS19935 () | 4439273..4439734 | - | 462 | Protein_3884 | Bcr/CflA family drug resistance efflux transporter | - |
| IQ281_RS19940 () | 4439941..4440567 | - | 627 | Protein_3885 | efflux RND transporter permease subunit | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|