MGE detailed information
MGE type: Genomic_island MGE length: 18911 bp
Accession: NZ_CP063773 Location: 2355567..2374477 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Accession: NZ_CP063773 Location: 2355567..2374477 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQ281_RS10545 () | 2350886..2351635 | - | 750 | WP_012773517.1 | molecular chaperone | - |
| IQ281_RS10550 () | 2351673..2354168 | - | 2496 | WP_194431672.1 | fimbria/pilus outer membrane usher protein | - |
| IQ281_RS10555 () | 2354319..2354867 | - | 549 | WP_194431673.1 | type 1 fimbrial protein | - |
| IQ281_RS10560 () | 2355567..2356352 | + | 786 | WP_194431674.1 | winged helix-turn-helix domain-containing protein | - |
| IQ281_RS10565 () | 2356339..2356809 | + | 471 | WP_181829803.1 | FidL | - |
| IQ281_RS10570 () | 2356887..2357459 | - | 573 | WP_194431675.1 | HTH-type transcriptional regulator BetI | VF |
| IQ281_RS10575 () | 2357552..2358445 | + | 894 | WP_194431676.1 | ABC transporter six-transmembrane domain-containing protein | - |
| IQ281_RS10580 () | 2358545..2359099 | - | 555 | WP_181848215.1 | copper-binding periplasmic metallochaperone CueP | - |
| IQ281_RS10585 () | 2359321..2360085 | - | 765 | WP_180778156.1 | sulfite exporter TauE/SafE family protein | - |
| IQ281_RS10590 () | 2360218..2361102 | + | 885 | WP_194431677.1 | LysR family transcriptional regulator | - |
| IQ281_RS10595 () | 2361182..2362171 | + | 990 | WP_194431678.1 | Gfo/Idh/MocA family oxidoreductase | - |
| IQ281_RS10600 () | 2362307..2362879 | - | 573 | WP_194431679.1 | hypothetical protein | - |
| IQ281_RS10605 () | 2363152..2363751 | - | 600 | WP_182099238.1 | TetR/AcrR family transcriptional regulator | - |
| IQ281_RS10610 () | 2363868..2364467 | + | 600 | WP_194431680.1 | NAD(P)H-dependent oxidoreductase | - |
| IQ281_RS10615 () | 2364689..2365726 | + | 1038 | WP_194431763.1 | methyltransferase | - |
| IQ281_RS10620 () | 2366425..2367444 | - | 1020 | WP_194431681.1 | alpha/beta hydrolase | - |
| IQ281_RS10625 () | 2367605..2368027 | + | 423 | WP_039283843.1 | MarR family transcriptional regulator | - |
| IQ281_RS10630 () | 2368152..2369339 | - | 1188 | WP_194431682.1 | MFS transporter | - |
| IQ281_RS10635 () | 2369455..2370411 | + | 957 | WP_194431683.1 | AraC family transcriptional regulator | - |
| IQ281_RS10640 () | 2370620..2370913 | + | 294 | WP_194431684.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| IQ281_RS10645 () | 2370910..2371404 | + | 495 | WP_194431685.1 | GNAT family N-acetyltransferase | Toxin Detail |
| IQ281_RS10650 () | 2371630..2372628 | - | 999 | WP_194431686.1 | hypothetical protein | - |
| IQ281_RS10655 () | 2372796..2373107 | + | 312 | WP_194431807.1 | IS3 family transposase ISKpn34 | Transposase |
| IQ281_RS10660 () | 2373003..2373262 | - | 260 | Protein_2062 | type II toxin-antitoxin system toxin CcdB | - |
| IQ281_RS10665 () | 2373310..2373528 | - | 219 | WP_194431687.1 | type II toxin-antitoxin system antitoxin CcdA | - |
| IQ281_RS10670 () | 2373543..2373791 | - | 249 | WP_194431688.1 | helix-turn-helix domain-containing protein | - |
| IQ281_RS10675 () | 2373877..2374131 | - | 255 | WP_039285388.1 | helix-turn-helix domain-containing protein | - |
| IQ281_RS10680 () | 2374235..2374477 | + | 243 | WP_194431689.1 | helix-turn-helix domain-containing protein | - |
| IQ281_RS10690 () | 2375321..2377474 | + | 2154 | WP_194431690.1 | ornithine decarboxylase | - |
| IQ281_RS10695 () | 2377535..2378986 | - | 1452 | WP_180778174.1 | L-asparagine permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|