MGE detailed information
MGE type: Genomic_island MGE length: 10876 bp
Accession: NZ_CP063773 Location: 1854312..1865187 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Accession: NZ_CP063773 Location: 1854312..1865187 Organism: Pectobacterium carotovorum subsp. carotovorum PCCS1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQ281_RS08405 () | 1849844..1850959 | + | 1116 | WP_181829932.1 | LPS export ABC transporter permease LptF | - |
| IQ281_RS08410 () | 1850959..1852035 | + | 1077 | WP_181829931.1 | LPS export ABC transporter permease LptG | - |
| IQ281_RS08420 () | 1852569..1853825 | + | 1257 | WP_194431750.1 | tyrosine-type recombinase/integrase | - |
| IQ281_RS08425 () | 1853844..1854005 | + | 162 | WP_194431489.1 | CopG family transcriptional regulator | - |
| IQ281_RS08430 () | 1854312..1854617 | + | 306 | WP_194431490.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| IQ281_RS08435 () | 1854622..1855956 | + | 1335 | WP_194431491.1 | type II toxin-antitoxin system HipA family toxin | Toxin Detail |
| IQ281_RS08440 () | 1856231..1858267 | - | 2037 | WP_194431492.1 | AAA family ATPase | - |
| IQ281_RS08445 () | 1858260..1858793 | - | 534 | WP_194431751.1 | ash family protein | - |
| IQ281_RS08450 () | 1858793..1858993 | - | 201 | WP_005971237.1 | AlpA family transcriptional regulator | - |
| IQ281_RS08455 () | 1858996..1859874 | - | 879 | WP_194431493.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IQ281_RS08460 () | 1860419..1860670 | - | 252 | WP_180778919.1 | hypothetical protein | - |
| IQ281_RS08465 () | 1860887..1861246 | + | 360 | WP_194431494.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IQ281_RS08470 () | 1861230..1861553 | + | 324 | WP_194431495.1 | DNA-binding transcriptional regulator | - |
| IQ281_RS08475 () | 1861724..1862710 | + | 987 | WP_194431496.1 | ATP-binding protein | - |
| IQ281_RS08480 () | 1862731..1865187 | + | 2457 | WP_194431497.1 | S8 family peptidase | - |
| IQ281_RS08485 () | 1865595..1866023 | + | 429 | WP_181847116.1 | GNAT family N-acetyltransferase | - |
| IQ281_RS08490 () | 1866114..1867235 | + | 1122 | WP_194431498.1 | cupin domain-containing protein | - |
| IQ281_RS08495 () | 1867412..1868572 | + | 1161 | WP_194431499.1 | alpha/beta hydrolase | - |
| IQ281_RS08500 () | 1868649..1869842 | - | 1194 | WP_194431500.1 | ABC transporter permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|