MGE detailed information
MGE type: Prophage MGE length: 30788 bp
Accession: NZ_CP063483 Location: 4343584..4374371 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Accession: NZ_CP063483 Location: 4343584..4374371 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS21_RS20795 () | 4338860..4339198 | + | 339 | Protein_4048 | LysR family transcriptional regulator | - |
| IQS21_RS20800 () | 4339542..4339901 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| IQS21_RS20805 () | 4339894..4340436 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| IQS21_RS20810 () | 4341040..4341321 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| IQS21_RS20815 () | 4341996..4342181 | + | 186 | WP_001236873.1 | AlpA family phage regulatory protein | - |
| IQS21_RS20820 () | 4343176..4343565 | + | 390 | WP_000560496.1 | hypothetical protein | - |
| IQS21_RS20825 () | 4343584..4345689 | - | 2106 | WP_001585370.1 | hypothetical protein | - |
| IQS21_RS20830 () | 4345689..4347110 | - | 1422 | WP_001585369.1 | phage DNA ejection protein | - |
| IQS21_RS20835 () | 4347110..4347787 | - | 678 | WP_000909175.1 | hypothetical protein | - |
| IQS21_RS20840 () | 4347781..4348242 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| IQS21_RS20845 () | 4348259..4348420 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| IQS21_RS20850 () | 4349005..4351761 | - | 2757 | WP_001585368.1 | TOPRIM and DUF927 domain-containing protein | - |
| IQS21_RS20855 () | 4351748..4352119 | - | 372 | WP_001580247.1 | hypothetical protein | - |
| IQS21_RS20860 () | 4352112..4352453 | - | 342 | WP_000628967.1 | hypothetical protein | - |
| IQS21_RS20865 () | 4352464..4353066 | - | 603 | WP_001058748.1 | hypothetical protein | - |
| IQS21_RS20870 () | 4353059..4353280 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| IQS21_RS20875 () | 4353277..4353540 | - | 264 | WP_001024675.1 | hypothetical protein | - |
| IQS21_RS20880 () | 4353537..4353731 | - | 195 | WP_001065741.1 | hypothetical protein | - |
| IQS21_RS20885 () | 4353724..4354791 | - | 1068 | WP_000958750.1 | ash family protein | - |
| IQS21_RS20890 () | 4354785..4354967 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| IQS21_RS20895 () | 4354960..4355793 | - | 834 | WP_001019376.1 | antA/AntB antirepressor family protein | - |
| IQS21_RS20900 () | 4355806..4356237 | - | 432 | WP_001035842.1 | hypothetical protein | - |
| IQS21_RS20905 () | 4356237..4356434 | - | 198 | WP_000083330.1 | AlpA family transcriptional regulator | - |
| IQS21_RS20910 () | 4356632..4357513 | - | 882 | WP_000251023.1 | hypothetical protein | - |
| IQS21_RS20915 () | 4357656..4358870 | - | 1215 | WP_000772642.1 | hypothetical protein ; Integrase | Integrase |
| IQS21_RS20925 () | 4359226..4360479 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IQS21_RS20930 () | 4360491..4361594 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IQS21_RS20935 () | 4361882..4362937 | + | 1056 | WP_000749867.1 | phosphoporin PhoE | - |
| IQS21_RS20940 () | 4362976..4363377 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| IQS21_RS20945 () | 4363435..4364679 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 4364095..4364175 | - | 81 | NuclAT_11 | - | - |
| - () | 4364095..4364175 | - | 81 | NuclAT_11 | - | - |
| - () | 4364095..4364175 | - | 81 | NuclAT_11 | - | - |
| - () | 4364095..4364175 | - | 81 | NuclAT_11 | - | - |
| IQS21_RS20950 () | 4364771..4365229 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IQS21_RS20955 () | 4365490..4366947 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| IQS21_RS20960 () | 4367004..4367525 | - | 522 | Protein_4080 | peptide chain release factor H | - |
| IQS21_RS20965 () | 4367521..4367727 | - | 207 | Protein_4081 | RtcB family protein | - |
| IQS21_RS20970 () | 4368045..4368497 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| IQS21_RS20975 () | 4368507..4368905 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IQS21_RS20980 () | 4368908..4369201 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IQS21_RS20985 () | 4369253..4370308 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IQS21_RS20990 () | 4370379..4371164 | - | 786 | WP_000207552.1 | hypothetical protein | VF |
| IQS21_RS20995 () | 4371136..4372848 | + | 1713 | Protein_4087 | hypothetical protein | VF |
| IQS21_RS21000 () | 4373072..4373569 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| IQS21_RS21005 () | 4373745..4374494 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| IQS21_RS21010 () | 4374704..4374964 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| IQS21_RS21015 () | 4374967..4375245 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | - |
| IQS21_RS21020 () | 4375401..4376141 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IQS21_RS21025 () | 4376112..4376879 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IQS21_RS21030 () | 4377085..4377663 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|