MGE detailed information
MGE type: Prophage MGE length: 51756 bp
Accession: NZ_CP063483 Location: 2998422..3050177 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Accession: NZ_CP063483 Location: 2998422..3050177 Organism: Escherichia coli strain EM03-18-08 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS21_RS14365 () | 2993693..2994403 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| IQS21_RS14370 () | 2994406..2994966 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IQS21_RS14375 () | 2995001..2995342 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IQS21_RS14380 () | 2995477..2995803 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IQS21_RS14385 () | 2996009..2997203 | + | 1195 | Protein_2793 | starvation-sensing protein RspA | - |
| IQS21_RS14390 () | 2997215..2998234 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IQS21_RS14395 () | 2998292..2998402 | + | 111 | WP_001360138.1 | hypothetical protein | - |
| IQS21_RS14400 () | 2998422..2999702 | - | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IQS21_RS14405 () | 2999737..2999988 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IQS21_RS14410 () | 3000061..3002532 | - | 2472 | Protein_2798 | 3'-5' exoribonuclease | - |
| IQS21_RS14415 () | 3002625..3002816 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| IQS21_RS14420 () | 3002813..3003001 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| IQS21_RS14425 () | 3003569..3003787 | - | 219 | WP_001171942.1 | hypothetical protein | - |
| IQS21_RS14430 () | 3003947..3004102 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| IQS21_RS14435 () | 3004269..3004676 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| IQS21_RS14440 () | 3004760..3004990 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| IQS21_RS14445 () | 3004974..3005495 | + | 522 | WP_000705358.1 | hypothetical protein | - |
| IQS21_RS14450 () | 3005476..3006441 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| IQS21_RS14455 () | 3006482..3006904 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| IQS21_RS14460 () | 3006901..3007257 | + | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| IQS21_RS14465 () | 3007777..3009312 | - | 1536 | WP_001333339.1 | IS66 family transposase ISEc22 | Transposase |
| IQS21_RS14470 () | 3009361..3009708 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IQS21_RS14475 () | 3009705..3010109 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| IQS21_RS14480 () | 3010331..3010618 | + | 288 | Protein_2812 | hypothetical protein | - |
| IQS21_RS14485 () | 3011387..3012700 | + | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| IQS21_RS14490 () | 3013137..3013469 | - | 333 | WP_001301033.1 | protein FlxA | - |
| IQS21_RS14495 () | 3013672..3013977 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IQS21_RS14500 () | 3014002..3014241 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IQS21_RS14505 () | 3014241..3014528 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IQS21_RS14510 () | 3014600..3014755 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IQS21_RS14515 () | 3014972..3015223 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IQS21_RS14520 () | 3015290..3015568 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IQS21_RS14525 () | 3015570..3016619 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| IQS21_RS14530 () | 3016633..3017124 | + | 492 | WP_052424683.1 | antitermination protein | - |
| IQS21_RS14535 () | 3017158..3017855 | + | 698 | WP_106423973.1 | IS1 family transposase | - |
| IQS21_RS14540 () | 3018193..3018408 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IQS21_RS14545 () | 3018413..3018724 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| IQS21_RS14550 () | 3018721..3019254 | + | 534 | WP_001092971.1 | lysozyme | - |
| IQS21_RS14555 () | 3019251..3019748 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IQS21_RS14560 () | 3020111..3020323 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IQS21_RS14565 () | 3020334..3020522 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IQS21_RS14570 () | 3020525..3020590 | + | 66 | WP_120795388.1 | hypothetical protein | - |
| IQS21_RS14575 () | 3020670..3020825 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IQS21_RS14580 () | 3020997..3021170 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IQS21_RS14585 () | 3021322..3021732 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IQS21_RS14590 () | 3021790..3022023 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IQS21_RS14595 () | 3022412..3022957 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| IQS21_RS14600 () | 3022932..3024857 | + | 1926 | WP_001027259.1 | phage terminase large subunit family protein | - |
| IQS21_RS14605 () | 3024854..3025060 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IQS21_RS14610 () | 3025057..3026658 | + | 1602 | WP_001349919.1 | phage portal protein | - |
| IQS21_RS14615 () | 3026639..3027958 | + | 1320 | WP_072775492.1 | S49 family peptidase | - |
| IQS21_RS14620 () | 3027968..3028300 | + | 333 | WP_001295978.1 | head decoration protein | - |
| IQS21_RS14625 () | 3028357..3029382 | + | 1026 | WP_000063277.1 | major capsid protein | - |
| IQS21_RS14630 () | 3029424..3029822 | + | 399 | WP_000158905.1 | DNA-packaging protein FI | - |
| IQS21_RS14635 () | 3029834..3030187 | + | 354 | WP_000753007.1 | head-tail joining protein | - |
| IQS21_RS14640 () | 3030199..3030777 | + | 579 | WP_000975070.1 | phage tail protein | - |
| IQS21_RS14645 () | 3030774..3031169 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| IQS21_RS14650 () | 3031177..3031917 | + | 741 | WP_001349920.1 | phage tail protein | - |
| IQS21_RS14655 () | 3031933..3032355 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| IQS21_RS14660 () | 3032337..3032771 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| IQS21_RS14665 () | 3032764..3035325 | + | 2562 | WP_000840342.1 | phage tail tape measure protein | - |
| IQS21_RS14670 () | 3035322..3035651 | + | 330 | WP_000847379.1 | phage tail protein | - |
| IQS21_RS14675 () | 3035651..3036349 | + | 699 | WP_001152640.1 | phage minor tail protein L | - |
| IQS21_RS14680 () | 3036355..3037098 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| IQS21_RS14685 () | 3037035..3037667 | + | 633 | WP_000090895.1 | tail assembly protein | - |
| IQS21_RS14690 () | 3037728..3041225 | + | 3498 | WP_000515714.1 | host specificity protein J | - |
| IQS21_RS14695 () | 3041295..3041894 | + | 600 | WP_001230375.1 | hypothetical protein | VF |
| IQS21_RS14700 () | 3041959..3043626 | + | 1668 | Protein_2856 | prophage tail fiber N-terminal domain-containing protein | - |
| IQS21_RS14710 () | 3045392..3046294 | + | 903 | WP_044721746.1 | phage tail protein | - |
| IQS21_RS14715 () | 3046294..3046869 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| IQS21_RS14720 () | 3046967..3047557 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IQS21_RS14725 () | 3047874..3048107 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IQS21_RS14730 () | 3048176..3048289 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IQS21_RS14735 () | 3048810..3050177 | + | 1368 | Protein_2863 | MHS family MFS transporter | - |
| IQS21_RS14740 () | 3050266..3051726 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IQS21_RS14745 () | 3051761..3051964 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IQS21_RS14750 () | 3052141..3052827 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IQS21_RS14755 () | 3052916..3053662 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|