MGE detailed information
MGE type: Mobilizable plasmid MGE length: 113297 bp
Accession: NZ_CP063477 Location: 1..113297 Organism: Escherichia coli strain EM10-18-28 Replicon: plasmid pEM10-18-28_1
Accession: NZ_CP063477 Location: 1..113297 Organism: Escherichia coli strain EM10-18-28 Replicon: plasmid pEM10-18-28_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS23_RS23560 () | 274..846 | + | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| IQS23_RS23565 () | 883..2274 | + | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| IQS23_RS23570 () | 2307..2735 | + | 429 | Protein_3 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| IQS23_RS23575 () | 3054..3710 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IQS23_RS23580 () | 4105..4721 | + | 617 | Protein_5 | transposase | - |
| IQS23_RS23585 () | 4788..5492 | + | 705 | WP_086525284.1 | IS6 family transposase IS26 | Transposase |
| IQS23_RS23590 () | 5546..6550 | - | 1005 | Protein_7 | IS91 family transposase ISAzo26 | Transposase |
| IQS23_RS23595 () | 6706..7179 | + | 474 | WP_004201280.1 | Dihydrofolate reductase type 1 | ARG |
| IQS23_RS23600 () | 7426..8130 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS23_RS23605 () | 8660..9520 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| IQS23_RS23610 () | 9725..10429 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS23_RS23615 () | 10435..10575 | + | 141 | WP_001044210.1 | hypothetical protein | - |
| IQS23_RS23620 () | 11061..11798 | + | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IQS23_RS23625 () | 11795..12019 | + | 225 | WP_000743213.1 | hypothetical protein | - |
| IQS23_RS23630 () | 12230..13723 | + | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| IQS23_RS23635 () | 14192..14638 | + | 447 | Protein_16 | DUF3363 domain-containing protein | - |
| IQS23_RS23640 () | 14855..16069 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| IQS23_RS23645 () | 16097..16402 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator CynR | VF |
| IQS23_RS23650 () | 16514..16702 | + | 189 | Protein_19 | IS91 family transposase | - |
| IQS23_RS23655 () | 16669..17868 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| IQS23_RS23660 () | 17974..18624 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS23_RS23665 () | 18689..20932 | - | 2244 | Protein_22 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IQS23_RS23670 () | 20984..21688 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| IQS23_RS23675 () | 21752..22480 | + | 729 | Protein_24 | hypothetical protein | ARG |
| IQS23_RS23680 () | 22696..23322 | - | 627 | WP_000434930.1 | hypothetical protein | - |
| IQS23_RS23685 () | 23322..25403 | - | 2082 | Protein_26 | AAA family ATPase | - |
| IQS23_RS23690 () | 25448..26152 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IQS23_RS23695 () | 26209..26286 | + | 78 | Protein_28 | helix-turn-helix domain-containing protein | - |
| IQS23_RS23700 () | 26290..28026 | + | 1737 | Protein_29 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IQS23_RS23705 () | 28091..28795 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IQS23_RS23710 () | 28848..29345 | - | 498 | Protein_31 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| IQS23_RS23715 () | 29655..31232 | + | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| IQS23_RS23720 () | 31422..31673 | - | 252 | Protein_33 | IS1 family transposase IS1A | Transposase |
| IQS23_RS23725 () | 31775..32098 | - | 324 | WP_001175593.1 | helix-turn-helix domain-containing protein | - |
| IQS23_RS23730 () | 32204..33337 | + | 1134 | WP_001089730.1 | permease | - |
| IQS23_RS23735 () | 33465..33869 | - | 405 | Protein_36 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IQS23_RS23740 () | 34037..37024 | + | 2988 | WP_000124023.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| IQS23_RS23745 () | 37561..38824 | + | 1264 | Protein_38 | hypothetical protein | - |
| IQS23_RS23750 () | 38897..39403 | + | 507 | WP_032203676.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| IQS23_RS23755 () | 39670..40860 | - | 1191 | Protein_40 | type I restriction endonuclease subunit R | - |
| IQS23_RS23760 () | 40918..41886 | - | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| IQS23_RS23765 () | 42055..42174 | + | 120 | WP_071527722.1 | ash family protein | - |
| IQS23_RS23770 () | 42193..42414 | + | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| IQS23_RS23775 () | 42411..43526 | + | 1116 | WP_032203728.1 | phage antirepressor KilAC domain-containing protein | - |
| IQS23_RS23780 () | 43559..44410 | - | 852 | WP_000611664.1 | hypothetical protein | - |
| IQS23_RS23785 () | 44521..44730 | - | 210 | WP_000874156.1 | hypothetical protein | - |
| IQS23_RS23790 () | 44901..45598 | + | 698 | Protein_47 | IS1 family transposase IS1S | Transposase |
| IQS23_RS23795 () | 45896..48322 | + | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| IQS23_RS23800 () | 48336..48962 | + | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| IQS23_RS23805 () | 48955..49731 | + | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| IQS23_RS23810 () | 49786..50382 | + | 597 | WP_032203482.1 | molecular chaperone | - |
| IQS23_RS23815 () | 50379..50909 | + | 531 | WP_001327048.1 | 4Fe-4S binding protein | - |
| IQS23_RS23820 () | 51367..52359 | + | 993 | WP_096983201.1 | IS5 family transposase ISKpn26 | Transposase |
| IQS23_RS23825 () | 52983..53204 | + | 222 | WP_000542385.1 | hypothetical protein | - |
| IQS23_RS23830 () | 53212..54243 | + | 1032 | WP_000067534.1 | site-specific integrase | - |
| IQS23_RS23835 () | 54294..54605 | + | 312 | WP_016246567.1 | hypothetical protein | - |
| IQS23_RS23840 () | 54798..54905 | - | 108 | WP_071595431.1 | Tn3 family transposase | - |
| IQS23_RS23845 () | 54954..55593 | + | 640 | Protein_58 | recombinase family protein | - |
| IQS23_RS23850 () | 55700..56101 | - | 402 | Protein_59 | ester cyclase | - |
| IQS23_RS23855 () | 56110..57099 | - | 990 | WP_000104482.1 | HTH-type transcriptional regulator CdhR | VF |
| IQS23_RS23860 () | 57115..57891 | - | 777 | WP_000691857.1 | MBL fold metallo-hydrolase | - |
| IQS23_RS23865 () | 58110..58496 | + | 387 | WP_001276786.1 | Ref family protein | - |
| IQS23_RS23870 () | 58575..59330 | + | 756 | WP_072649769.1 | hypothetical protein | - |
| IQS23_RS23875 () | 59384..60073 | - | 690 | WP_203038317.1 | EAL domain-containing protein | - |
| IQS23_RS23880 () | 60308..61029 | + | 722 | Protein_65 | helix-turn-helix domain-containing protein | - |
| IQS23_RS23885 () | 61068..61316 | - | 249 | WP_000747846.1 | hypothetical protein | - |
| IQS23_RS23890 () | 61313..61753 | - | 441 | WP_023352064.1 | hypothetical protein | - |
| IQS23_RS23895 () | 61787..63604 | - | 1818 | Protein_68 | helicase | - |
| IQS23_RS23900 () | 64217..64468 | + | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IQS23_RS23905 () | 64465..64752 | + | 288 | WP_000222771.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS23_RS23910 () | 65042..65242 | - | 201 | WP_000896262.1 | DUF839 domain-containing protein | - |
| IQS23_RS23915 () | 65232..65437 | + | 206 | Protein_72 | transposase | - |
| IQS23_RS23920 () | 65612..69163 | - | 3552 | WP_097307726.1 | Outer membrane protein IcsA autotransporter | VF |
| IQS23_RS23925 () | 69748..69993 | - | 246 | Protein_74 | IS91 family transposase | - |
| IQS23_RS23930 () | 70055..71605 | - | 1551 | WP_038997032.1 | IS3 family transposase ISKpn38 | Transposase |
| IQS23_RS23935 () | 71671..72576 | - | 906 | Protein_76 | IS3 family transposase ISEc31 | Transposase |
| IQS23_RS23940 () | 72665..72958 | - | 294 | Protein_77 | conjugal transfer protein TraH | - |
| IQS23_RS23945 () | 72948..73994 | - | 1047 | WP_038999229.1 | thioredoxin family protein | - |
| IQS23_RS23950 () | 74608..75119 | - | 512 | Protein_79 | hypothetical protein | - |
| IQS23_RS23955 () | 75122..75920 | - | 799 | Protein_80 | trhR | - |
| IQS23_RS23960 () | 76678..77163 | + | 486 | WP_000071636.1 | hypothetical protein | - |
| IQS23_RS23965 () | 77160..77882 | + | 723 | WP_203038322.1 | hypothetical protein | - |
| IQS23_RS23970 () | 77893..79509 | + | 1617 | Protein_83 | hypothetical protein | Relaxase |
| IQS23_RS23975 () | 79518..80215 | - | 698 | Protein_84 | IS1 family transposase IS1G | Transposase |
| IQS23_RS23980 () | 80294..80991 | - | 698 | Protein_85 | IS1 family transposase IS1X4 | Transposase |
| IQS23_RS23985 () | 81082..82317 | - | 1236 | WP_032177316.1 | MFS transporter | - |
| IQS23_RS23990 () | 82330..83154 | - | 825 | WP_032203560.1 | carbon-phosphorus lyase | - |
| IQS23_RS23995 () | 83488..85662 | + | 2175 | WP_032176963.1 | Catabolite control protein A | VF |
| IQS23_RS24000 () | 85710..86726 | - | 1017 | Protein_89 | IS256 family transposase IS1414 | Transposase |
| IQS23_RS24005 () | 86747..87965 | - | 1219 | Protein_90 | IS3 family transposase | - |
| IQS23_RS24010 () | 88363..88518 | + | 156 | WP_203038313.1 | type I toxin-antitoxin system Hok family toxin | - |
| IQS23_RS24015 () | 88712..89824 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| IQS23_RS24020 () | 89984..90493 | - | 510 | WP_000509940.1 | hypothetical protein | - |
| IQS23_RS24025 () | 90505..91086 | - | 582 | WP_203038314.1 | hypothetical protein | - |
| IQS23_RS24030 () | 91122..91937 | - | 816 | WP_001514461.1 | hypothetical protein | - |
| IQS23_RS24035 () | 91947..93536 | - | 1590 | WP_032203566.1 | hypothetical protein | - |
| IQS23_RS24040 () | 93596..95302 | - | 1707 | WP_203038315.1 | hypothetical protein | - |
| IQS23_RS24045 () | 95528..96529 | - | 1002 | WP_203038316.1 | ParB/RepB/Spo0J family partition protein | - |
| IQS23_RS24050 () | 96546..97742 | - | 1197 | WP_001285362.1 | AAA family ATPase | - |
| IQS23_RS24055 () | 97911..98720 | - | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| IQS23_RS24060 () | 99013..99897 | - | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| IQS23_RS24065 () | 100233..100625 | - | 393 | WP_001281115.1 | hypothetical protein | - |
| IQS23_RS24070 () | 100635..100775 | - | 141 | WP_000336812.1 | hypothetical protein | - |
| IQS23_RS24075 () | 100801..101223 | - | 423 | WP_000007763.1 | hypothetical protein | - |
| IQS23_RS24080 () | 101263..102051 | - | 789 | WP_000890209.1 | hypothetical protein | - |
| IQS23_RS24085 () | 102241..102824 | + | 584 | Protein_106 | IS1 family transposase IS1S | Transposase |
| IQS23_RS24090 () | 102916..104143 | + | 1228 | Protein_107 | IS3 family transposase IS2 | Transposase |
| IQS23_RS24095 () | 104151..104291 | + | 141 | Protein_108 | L-threonine dehydrogenase | - |
| IQS23_RS24100 () | 104446..105180 | - | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| IQS23_RS24105 () | 105322..106549 | - | 1228 | Protein_110 | IS3 family transposase IS2 | Transposase |
| IQS23_RS24110 () | 106608..106796 | + | 189 | Protein_111 | PerC family transcriptional regulator | - |
| IQS23_RS24115 () | 106812..107261 | - | 450 | Protein_112 | IS1 family transposase IS1R | Transposase |
| IQS23_RS24120 () | 107296..109047 | - | 1752 | Protein_113 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IQS23_RS24125 () | 109036..109443 | + | 408 | WP_001214976.1 | cysteine hydrolase | - |
| IQS23_RS24130 () | 109581..110465 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| IQS23_RS24135 () | 110497..111696 | - | 1200 | WP_001493765.1 | Tetracycline resistance protein, class C | ARG |
| IQS23_RS24140 () | 111802..112452 | + | 651 | WP_001493764.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS23_RS24145 () | 112484..112726 | - | 243 | WP_000844627.1 | transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|