MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 47868 bp
Accession: NZ_CP063475 Location: 1..47868 Organism: Escherichia coli strain EM18-18-42 Replicon: plasmid pEM18-18-42_2
Accession: NZ_CP063475 Location: 1..47868 Organism: Escherichia coli strain EM18-18-42 Replicon: plasmid pEM18-18-42_2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS24_RS23855 () | 50..379 | - | 330 | WP_000866648.1 | hypothetical protein | - |
| IQS24_RS23860 () | 472..687 | - | 216 | WP_001180116.1 | hypothetical protein | - |
| IQS24_RS23865 () | 677..922 | - | 246 | WP_000356546.1 | hypothetical protein | - |
| IQS24_RS23870 () | 967..1290 | - | 324 | WP_001181903.1 | hypothetical protein | - |
| IQS24_RS23875 () | 1436..1717 | - | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IQS24_RS23880 () | 1707..1958 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| IQS24_RS23885 () | 3214..4050 | + | 837 | WP_001050931.1 | replication initiation protein | - |
| IQS24_RS23890 () | 4090..4536 | + | 447 | WP_001074386.1 | hypothetical protein | - |
| IQS24_RS23895 () | 4604..5026 | + | 423 | WP_031942371.1 | DNA distortion polypeptide 3 | - |
| IQS24_RS23900 () | 5086..6054 | - | 969 | WP_166501310.1 | IS5 family transposase IS903B | Transposase |
| IQS24_RS23905 () | 6056..6349 | - | 294 | WP_015060510.1 | hypothetical protein | - |
| IQS24_RS23910 () | 6365..6595 | - | 231 | WP_000051064.1 | partitioning protein | - |
| IQS24_RS23915 () | 6647..7267 | - | 621 | WP_000864791.1 | ParA family protein | - |
| IQS24_RS23920 () | 7553..8191 | + | 639 | WP_038976852.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IQS24_RS23925 () | 8359..9063 | + | 705 | WP_069219382.1 | IS6 family transposase IS26 | Transposase |
| IQS24_RS23930 () | 9185..10090 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| IQS24_RS23935 () | 10087..11325 | + | 1239 | WP_000004159.1 | MFS transporter | - |
| IQS24_RS23940 () | 11325..11909 | + | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| IQS24_RS23945 () | 12402..13166 | - | 765 | WP_001389365.1 | Tn3 family transposase TnpA_ISShes11 | Transposase |
| IQS24_RS23950 () | 13230..13484 | + | 255 | Protein_19 | Tn3 family transposase TnpA_ISShes11 | Transposase |
| IQS24_RS23955 () | 13623..14258 | - | 636 | WP_039045916.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| IQS24_RS23960 () | 14364..15563 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| IQS24_RS23965 () | 15595..16479 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| IQS24_RS23970 () | 16617..17024 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| IQS24_RS23975 () | 17013..18764 | + | 1752 | Protein_24 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| IQS24_RS23980 () | 19042..19698 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| IQS24_RS23985 () | 20093..21108 | + | 1016 | Protein_26 | IS3 family transposase ISEc36 | Transposase |
| IQS24_RS23990 () | 21151..24156 | - | 3006 | WP_114265587.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IQS24_RS23995 () | 24320..24877 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IQS24_RS24000 () | 25060..25920 | + | 861 | WP_015058868.1 | Beta-lactamase TEM | ARG |
| IQS24_RS24005 () | 26058..26516 | + | 459 | Protein_30 | IS1 family transposase IS1A | Transposase |
| IQS24_RS24010 () | 27146..27550 | - | 405 | WP_000059893.1 | hypothetical protein | - |
| IQS24_RS24015 () | 27613..28062 | - | 450 | WP_001282381.1 | H-NS histone family protein | - |
| IQS24_RS24020 () | 28074..30398 | - | 2325 | WP_175154172.1 | type IA DNA topoisomerase | - |
| IQS24_RS24025 () | 30418..30663 | - | 246 | Protein_34 | hypothetical protein | - |
| IQS24_RS24030 () | 31078..31548 | - | 471 | WP_000689410.1 | thermonuclease family protein | - |
| IQS24_RS24035 () | 31631..31840 | - | 210 | WP_024256774.1 | hypothetical protein | - |
| IQS24_RS24040 () | 31966..32361 | - | 396 | WP_000733627.1 | cag pathogenicity island Cag12 family protein | - |
| IQS24_RS24045 () | 32358..34193 | - | 1836 | WP_000053826.1 | type IV secretory system conjugative DNA transfer family protein | - |
| IQS24_RS24050 () | 34198..35235 | - | 1038 | WP_000217791.1 | Type IV secretion system protein PtlH | VF |
| IQS24_RS24055 () | 35253..36467 | - | 1215 | WP_088491833.1 | Type IV secretion system protein virB10 | VF |
| IQS24_RS24060 () | 36464..37393 | - | 930 | WP_089569829.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| IQS24_RS24065 () | 37399..38121 | - | 723 | WP_000394570.1 | Type IV secretion system protein PtlE | VF |
| IQS24_RS24070 () | 38311..39366 | - | 1056 | WP_000235774.1 | type IV secretion system protein | - |
| IQS24_RS24075 () | 39378..39638 | - | 261 | WP_001228869.1 | EexN family lipoprotein | - |
| IQS24_RS24080 () | 39648..40385 | - | 738 | WP_089569828.1 | pilus assembly protein | - |
| IQS24_RS24085 () | 40387..43146 | - | 2760 | WP_205595710.1 | Type IV secretion system protein virB4 | VF |
| IQS24_RS24090 () | 43170..43460 | - | 291 | WP_000921916.1 | TrbC/VirB2 family protein | - |
| IQS24_RS24095 () | 43444..44088 | - | 645 | WP_089569826.1 | Type IV secretion system protein virB1 | VF |
| IQS24_RS24100 () | 44313..44804 | - | 492 | WP_000872475.1 | transcription termination factor NusG | - |
| IQS24_RS24105 () | 45165..46322 | - | 1158 | WP_000538023.1 | hypothetical protein | - |
| IQS24_RS24110 () | 46325..46870 | - | 546 | WP_038976855.1 | hypothetical protein | - |
| IQS24_RS24115 () | 47197..47469 | - | 273 | WP_000160399.1 | hypothetical protein | - |
| IQS24_RS24120 () | 47482..47631 | - | 150 | WP_000003880.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|