MGE detailed information
MGE type: Genomic_island MGE length: 39294 bp
Accession: NZ_CP063473 Location: 2231275..2270568 Organism: Escherichia coli strain EM18-18-42 Replicon: chromosome
Accession: NZ_CP063473 Location: 2231275..2270568 Organism: Escherichia coli strain EM18-18-42 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IQS24_RS10880 () | 2228090..2229775 | - | 1686 | WP_000628585.1 | ABC transporter ATP-binding protein/permease | - |
| IQS24_RS10885 () | 2229978..2230100 | + | 123 | WP_120795387.1 | protein YneP | - |
| IQS24_RS10890 () | 2230066..2231223 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| IQS24_RS10895 () | 2231275..2232957 | - | 1683 | WP_089623052.1 | sulfatase | - |
| IQS24_RS10900 () | 2233360..2234121 | - | 762 | WP_000060493.1 | acid stress response transcriptional regulator YdeO | - |
| IQS24_RS10905 () | 2234196..2234393 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| IQS24_RS10910 () | 2234641..2236920 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| IQS24_RS10915 () | 2237254..2238168 | - | 915 | WP_000520676.1 | hypothetical protein | VF |
| IQS24_RS10920 () | 2238227..2238730 | - | 504 | WP_000825452.1 | hypothetical protein | VF |
| IQS24_RS10925 () | 2238743..2239273 | - | 531 | WP_089623053.1 | hypothetical protein | VF |
| IQS24_RS10930 () | 2239287..2240513 | - | 1227 | Protein_2122 | hypothetical protein | VF |
| IQS24_RS10935 () | 2240768..2240976 | - | 209 | Protein_2123 | helix-turn-helix transcriptional regulator | - |
| IQS24_RS10940 () | 2241650..2243173 | + | 1524 | WP_097509507.1 | type I restriction-modification system subunit M | - |
| IQS24_RS10945 () | 2243163..2244350 | + | 1188 | WP_201477614.1 | restriction endonuclease subunit S | - |
| IQS24_RS10950 () | 2244347..2245030 | + | 684 | WP_001752616.1 | YecA family protein | - |
| IQS24_RS10955 () | 2245083..2248367 | + | 3285 | WP_001741679.1 | type I restriction endonuclease subunit R | - |
| IQS24_RS10960 () | 2248364..2249119 | + | 756 | WP_085438504.1 | M48 family metallopeptidase | - |
| IQS24_RS10965 () | 2249365..2249523 | - | 159 | Protein_2129 | helix-turn-helix transcriptional regulator | - |
| IQS24_RS10970 () | 2249831..2250391 | - | 561 | WP_205595689.1 | hypothetical protein | - |
| IQS24_RS10975 () | 2250489..2250821 | + | 333 | WP_001300511.1 | helix-turn-helix domain-containing protein | - |
| IQS24_RS10980 () | 2250805..2250977 | + | 173 | Protein_2132 | DUF2384 domain-containing protein | - |
| IQS24_RS10985 () | 2251038..2251472 | - | 435 | WP_001463403.1 | hypothetical protein | - |
| IQS24_RS10990 () | 2251472..2251720 | - | 249 | WP_201477613.1 | hypothetical protein | - |
| IQS24_RS10995 () | 2252051..2253262 | + | 1212 | WP_105315945.1 | hypothetical protein | - |
| IQS24_RS11000 () | 2253398..2254540 | + | 1143 | WP_001459743.1 | ATP-binding protein | - |
| IQS24_RS11005 () | 2254824..2257622 | - | 2799 | WP_201477612.1 | SEC-C domain-containing protein | - |
| IQS24_RS11010 () | 2257968..2259705 | + | 1738 | Protein_2138 | AAA family ATPase | - |
| IQS24_RS11015 () | 2259695..2261113 | + | 1419 | WP_001134628.1 | UvrD-helicase domain-containing protein | - |
| IQS24_RS11020 () | 2261202..2261498 | - | 297 | WP_000379666.1 | helix-turn-helix domain-containing protein | - |
| IQS24_RS11025 () | 2261806..2262367 | - | 562 | Protein_2141 | hypothetical protein | - |
| IQS24_RS11030 () | 2262465..2262797 | + | 333 | WP_024189840.1 | helix-turn-helix domain-containing protein | - |
| IQS24_RS11035 () | 2263002..2263436 | - | 435 | WP_001214175.1 | hypothetical protein | - |
| IQS24_RS11040 () | 2263436..2265802 | - | 2367 | WP_000788503.1 | hypothetical protein ; Integrase | Integrase |
| IQS24_RS11045 () | 2265786..2267351 | - | 1566 | WP_006810651.1 | hypothetical protein ; Integrase | Integrase |
| IQS24_RS11050 () | 2267338..2268732 | - | 1395 | WP_001543774.1 | hypothetical protein ; Integrase | Integrase |
| IQS24_RS11055 () | 2268980..2270302 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| IQS24_RS11060 () | 2270302..2270568 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| IQS24_RS11065 () | 2270791..2272191 | - | 1401 | WP_205595690.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|