MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93051 bp
Accession: NZ_CP063426 Location: 1..93051 Organism: Kosakonia pseudosacchari strain BDA62-3 Replicon: plasmid pBDA62-3
Accession: NZ_CP063426 Location: 1..93051 Organism: Kosakonia pseudosacchari strain BDA62-3 Replicon: plasmid pBDA62-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IP581_RS23325 () | 126..341 | - | 216 | WP_193822768.1 | hypothetical protein | - |
| IP581_RS23330 () | 338..916 | - | 579 | WP_193822769.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IP581_RS23335 () | 1045..1794 | - | 750 | WP_193822770.1 | hypothetical protein | - |
| IP581_RS23340 () | 1791..2528 | - | 738 | WP_193822771.1 | hypothetical protein | - |
| IP581_RS23345 () | 2525..3016 | - | 492 | WP_193822772.1 | hypothetical protein | - |
| IP581_RS23350 () | 3027..4442 | - | 1416 | WP_193822773.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| IP581_RS23355 () | 4439..5179 | - | 741 | WP_193822774.1 | type-F conjugative transfer system secretin TraK | - |
| IP581_RS23360 () | 5193..5771 | - | 579 | WP_175274445.1 | conjugal transfer protein TraE | - |
| IP581_RS23365 () | 5776..6078 | - | 303 | WP_035890047.1 | type IV conjugative transfer system protein TraL | - |
| IP581_RS23370 () | 6081..6434 | - | 354 | WP_193822775.1 | conjugal transfer protein TraA | - |
| IP581_RS23375 () | 6632..7267 | + | 636 | WP_193822776.1 | Arc family DNA-binding protein | - |
| IP581_RS23380 () | 7308..7703 | - | 396 | WP_016495608.1 | relaxosome protein TraM | - |
| IP581_RS23385 () | 8279..8806 | + | 528 | WP_193822806.1 | hypothetical protein | VF |
| IP581_RS23390 () | 8837..9657 | - | 821 | Protein_14 | DUF945 domain-containing protein | - |
| IP581_RS23395 () | 9668..9919 | - | 252 | WP_193822807.1 | hypothetical protein | - |
| IP581_RS23400 () | 10700..11110 | - | 411 | WP_193822777.1 | DUF1380 family protein | - |
| IP581_RS23405 () | 11156..11593 | - | 438 | WP_193822778.1 | antirestriction protein | - |
| IP581_RS23410 () | 12050..12286 | - | 237 | WP_193822779.1 | hypothetical protein | - |
| IP581_RS23415 () | 12304..12714 | - | 411 | WP_193822780.1 | DUF1380 family protein | - |
| IP581_RS23420 () | 12795..13448 | - | 654 | WP_193822781.1 | DNA methylase | - |
| IP581_RS23425 () | 13934..14398 | - | 465 | WP_193822782.1 | hypothetical protein | - |
| IP581_RS23430 () | 14922..16376 | + | 1455 | WP_193822783.1 | hypothetical protein | - |
| IP581_RS23435 () | 16520..16876 | - | 357 | WP_193822784.1 | hypothetical protein | - |
| IP581_RS23440 () | 17155..17856 | - | 702 | WP_193822808.1 | SAM-dependent DNA methyltransferase | - |
| IP581_RS23445 () | 18388..18648 | - | 261 | WP_193822785.1 | hypothetical protein | - |
| IP581_RS23450 () | 18663..19331 | - | 669 | WP_193822786.1 | plasmid partitioning/stability family protein | - |
| IP581_RS23455 () | 19334..20305 | - | 972 | WP_193822809.1 | StbA family protein | - |
| IP581_RS23460 () | 21003..21446 | + | 444 | WP_193822787.1 | selenium binding protein | - |
| IP581_RS23465 () | 21874..22317 | + | 444 | WP_016495512.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IP581_RS23470 () | 22305..23579 | + | 1275 | WP_193822788.1 | translesion error-prone DNA polymerase V subunit UmuC | - |
| IP581_RS23475 () | 24091..24852 | + | 762 | WP_193822789.1 | replication initiation protein RepE | - |
| IP581_RS23480 () | 25554..26189 | + | 636 | WP_090139061.1 | AAA family ATPase | - |
| IP581_RS23485 () | 26192..26485 | + | 294 | WP_175274485.1 | hypothetical protein | - |
| IP581_RS23490 () | 26562..27902 | - | 1341 | WP_193822790.1 | hypothetical protein | - |
| IP581_RS23495 () | 28190..28417 | + | 228 | WP_193822791.1 | hypothetical protein | - |
| IP581_RS23500 () | 28568..28780 | - | 213 | WP_193822792.1 | hypothetical protein | - |
| IP581_RS23505 () | 29377..29778 | + | 402 | WP_193822793.1 | hypothetical protein | - |
| IP581_RS23510 () | 29779..30067 | + | 289 | Protein_38 | hypothetical protein | - |
| IP581_RS23515 () | 30455..31243 | - | 789 | WP_144136437.1 | site-specific integrase | - |
| IP581_RS23520 () | 31292..31789 | - | 498 | WP_144136436.1 | site-2 protease family protein | - |
| IP581_RS23525 () | 31907..32215 | - | 309 | WP_193822794.1 | hypothetical protein | - |
| IP581_RS23530 () | 32786..33016 | + | 231 | WP_193822795.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IP581_RS23535 () | 33013..33429 | + | 417 | WP_193822796.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IP581_RS23540 () | 33459..34202 | + | 744 | WP_193822797.1 | hypothetical protein | - |
| IP581_RS23545 () | 34410..35336 | + | 927 | WP_193822798.1 | hypothetical protein | - |
| IP581_RS23550 () | 35836..36864 | + | 1029 | WP_193822799.1 | Abi family protein | - |
| IP581_RS23555 () | 36954..37427 | + | 474 | WP_193822800.1 | GNAT family N-acetyltransferase | - |
| IP581_RS23560 () | 37872..38948 | - | 1077 | WP_193822801.1 | hypothetical protein | - |
| IP581_RS23565 () | 39199..39672 | - | 474 | WP_193822802.1 | hypothetical protein | - |
| IP581_RS23570 () | 40150..40422 | + | 273 | WP_193822803.1 | hypothetical protein | - |
| IP581_RS23575 () | 40445..40720 | + | 276 | WP_193822804.1 | hypothetical protein | - |
| IP581_RS23580 () | 40859..41536 | + | 678 | WP_193822810.1 | SOS response-associated peptidase family protein | - |
| IP581_RS23585 () | 41916..42698 | + | 783 | WP_193822805.1 | conjugal transfer protein TraX | - |
| IP581_RS23590 () | 42710..42886 | - | 177 | WP_017460062.1 | hypothetical protein | - |
| IP581_RS23595 () | 43181..46165 | - | 2985 | WP_021242989.1 | Tn3 family transposase TnpA_ISSba14 | Transposase |
| IP581_RS23600 () | 46325..46909 | + | 585 | WP_012695450.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| IP581_RS23605 () | 47094..47651 | + | 558 | WP_000108589.1 | OsmC family protein | - |
| IP581_RS23610 () | 47793..48374 | + | 582 | WP_000210409.1 | HTH-type transcriptional repressor NemR | VF |
| IP581_RS23615 () | 48379..48717 | + | 339 | WP_000888080.1 | carboxymuconolactone decarboxylase family protein | - |
| IP581_RS23620 () | 48747..49076 | - | 330 | WP_002431133.1 | thioredoxin family protein | - |
| IP581_RS23625 () | 49290..50396 | + | 1107 | WP_006687059.1 | alkene reductase | - |
| IP581_RS23630 () | 50462..51163 | + | 702 | WP_001194072.1 | DsbA family oxidoreductase | - |
| IP581_RS23635 () | 51229..52002 | + | 774 | WP_004729618.1 | SDR family oxidoreductase | - |
| IP581_RS23640 () | 52188..53411 | - | 1224 | WP_023287190.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| IP581_RS23645 () | 53545..54414 | - | 870 | WP_001567390.1 | DMT family transporter | - |
| IP581_RS23650 () | 54655..55407 | + | 753 | WP_004729622.1 | alpha/beta hydrolase | - |
| IP581_RS23655 () | 55458..55747 | + | 290 | Protein_67 | Tn3 family transposase | - |
| IP581_RS23660 () | 55947..57335 | - | 1389 | WP_097402180.1 | Multidrug resistance protein Stp | VF |
| IP581_RS23665 () | 57574..57975 | + | 402 | WP_064564031.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| IP581_RS23670 () | 58086..59096 | + | 1011 | WP_193822743.1 | aldo/keto reductase | - |
| IP581_RS23675 () | 59195..59782 | - | 588 | WP_144136423.1 | cysteine/O-acetylserine transporter | - |
| IP581_RS23680 () | 59863..60765 | + | 903 | WP_193822744.1 | LysR family transcriptional regulator | - |
| IP581_RS23685 () | 61063..61392 | + | 330 | WP_193822745.1 | hypothetical protein | - |
| IP581_RS23690 () | 61370..62173 | - | 804 | WP_193822746.1 | DUF4225 domain-containing protein | - |
| IP581_RS23695 () | 62221..62460 | + | 240 | WP_193822747.1 | hypothetical protein | - |
| IP581_RS23700 () | 63098..64006 | - | 909 | WP_016495573.1 | replication initiation protein | - |
| IP581_RS23705 () | 64540..64740 | - | 201 | WP_189660123.1 | hypothetical protein | - |
| IP581_RS23710 () | 64691..64828 | + | 138 | WP_193822811.1 | hypothetical protein | - |
| IP581_RS23715 () | 65986..66768 | - | 783 | WP_016495574.1 | DsbA family protein | - |
| IP581_RS23720 () | 66784..72522 | - | 5739 | WP_193822748.1 | Multifunctional conjugation protein TraI | Relaxase |
| IP581_RS23725 () | 72519..75086 | - | 2568 | WP_193822749.1 | type IV conjugative transfer system coupling protein TraD | - |
| IP581_RS23730 () | 75365..75730 | - | 366 | WP_193822750.1 | hypothetical protein | - |
| IP581_RS23735 () | 75760..76491 | - | 732 | WP_193822751.1 | complement resistance protein TraT | - |
| IP581_RS23740 () | 76602..77093 | - | 492 | WP_193822752.1 | hypothetical protein | - |
| IP581_RS23745 () | 77095..80136 | - | 3042 | WP_193822753.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IP581_RS23750 () | 80136..81500 | - | 1365 | WP_193822754.1 | conjugal transfer protein TraH | - |
| IP581_RS23755 () | 81493..81747 | - | 255 | WP_193822812.1 | hypothetical protein | - |
| IP581_RS23760 () | 81777..82379 | - | 603 | WP_193822755.1 | F-type conjugal transfer protein TrbB | - |
| IP581_RS23765 () | 82369..82587 | - | 219 | WP_193822813.1 | hypothetical protein | - |
| IP581_RS23770 () | 82592..83071 | - | 480 | WP_193822756.1 | hypothetical protein | - |
| IP581_RS23775 () | 83080..83868 | - | 789 | WP_193822757.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IP581_RS23780 () | 83865..85709 | - | 1845 | WP_193822758.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IP581_RS23785 () | 85706..86314 | - | 609 | WP_193822759.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IP581_RS23790 () | 86323..87327 | - | 1005 | WP_193822760.1 | conjugal transfer pilus assembly protein TraU | - |
| IP581_RS23795 () | 87312..87659 | - | 348 | WP_193822761.1 | hypothetical protein | - |
| IP581_RS23800 () | 87726..87929 | - | 204 | WP_016495590.1 | hypothetical protein | - |
| IP581_RS23805 () | 87957..89015 | - | 1059 | WP_193822762.1 | hypothetical protein | - |
| IP581_RS23810 () | 89012..89260 | - | 249 | WP_193822763.1 | hypothetical protein | - |
| IP581_RS23815 () | 89257..89892 | - | 636 | WP_193822764.1 | type-F conjugative transfer system protein TraW | - |
| IP581_RS23820 () | 89889..90320 | - | 432 | WP_193822765.1 | type-F conjugative transfer system protein TrbI | - |
| IP581_RS23825 () | 90302..92941 | - | 2640 | WP_193822766.1 | type IV secretion system protein TraC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|