MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89201 bp
Accession: NZ_CP063395 Location: 5318208..5407408 Organism: Pseudomonas aeruginosa strain ST167_d57blood Replicon: chromosome
Accession: NZ_CP063395 Location: 5318208..5407408 Organism: Pseudomonas aeruginosa strain ST167_d57blood Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IPV39_RS24565 (IPV39_24570) | 5313780..5317979 | + | 4200 | WP_003455748.1 | two-partner secretion system exoprotein TpsA4 | - |
| IPV39_RS24575 (IPV39_24580) | 5318345..5319211 | + | 867 | WP_003111785.1 | ParA family protein | - |
| IPV39_RS24580 (IPV39_24585) | 5319213..5319950 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| IPV39_RS24585 (IPV39_24590) | 5319947..5320444 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| IPV39_RS24590 (IPV39_24595) | 5320441..5321271 | + | 831 | WP_004352853.1 | hypothetical protein | - |
| IPV39_RS24595 (IPV39_24600) | 5321268..5321954 | + | 687 | WP_003122071.1 | hypothetical protein | - |
| IPV39_RS24600 (IPV39_24605) | 5321954..5322655 | + | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| IPV39_RS24605 (IPV39_24610) | 5322652..5323359 | + | 708 | WP_004352852.1 | HNH endonuclease signature motif containing protein | - |
| IPV39_RS24610 (IPV39_24615) | 5323343..5323561 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| IPV39_RS24615 (IPV39_24620) | 5323558..5324901 | + | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| IPV39_RS24620 (IPV39_24625) | 5325340..5325786 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| IPV39_RS24625 (IPV39_24630) | 5325964..5326149 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| IPV39_RS24630 (IPV39_24635) | 5326139..5326666 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| IPV39_RS24635 (IPV39_24640) | 5326663..5326920 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| IPV39_RS24640 (IPV39_24645) | 5326913..5327155 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| IPV39_RS24645 (IPV39_24650) | 5327148..5327381 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| IPV39_RS24650 (IPV39_24655) | 5327381..5328397 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| IPV39_RS24655 (IPV39_24660) | 5328400..5328654 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| IPV39_RS24660 (IPV39_24665) | 5328651..5330387 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| IPV39_RS24665 (IPV39_24670) | 5330415..5331182 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| IPV39_RS24670 (IPV39_24675) | 5331179..5332450 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| IPV39_RS24675 | 5332447..5333244 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| IPV39_RS24680 (IPV39_24685) | 5333401..5334129 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| IPV39_RS24685 (IPV39_24690) | 5334135..5334683 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| IPV39_RS24690 (IPV39_24695) | 5334730..5335569 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| IPV39_RS24695 (IPV39_24700) | 5335599..5336087 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| IPV39_RS24700 (IPV39_24705) | 5336243..5336410 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| IPV39_RS24705 (IPV39_24710) | 5336476..5336694 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| IPV39_RS24710 (IPV39_24715) | 5336708..5336905 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| IPV39_RS24715 (IPV39_24720) | 5336921..5337331 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IPV39_RS24720 (IPV39_24725) | 5337331..5337561 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IPV39_RS24725 (IPV39_24730) | 5337817..5339736 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| IPV39_RS24730 (IPV39_24735) | 5340044..5340253 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| IPV39_RS24735 (IPV39_24740) | 5340474..5342363 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| IPV39_RS24740 (IPV39_24745) | 5342360..5344333 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| IPV39_RS24745 (IPV39_24750) | 5344455..5345237 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| IPV39_RS24750 (IPV39_24755) | 5345270..5346523 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| IPV39_RS24755 (IPV39_24760) | 5346697..5347821 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| IPV39_RS24760 (IPV39_24765) | 5347821..5349530 | + | 1710 | WP_004352834.1 | Outer membrane lipoprotein BfpB | VF |
| IPV39_RS24765 (IPV39_24770) | 5349534..5350859 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| IPV39_RS24770 (IPV39_24775) | 5350849..5351382 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| IPV39_RS24775 (IPV39_24780) | 5351391..5352971 | + | 1581 | WP_003123334.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| IPV39_RS24780 (IPV39_24785) | 5352971..5354050 | + | 1080 | WP_003123335.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| IPV39_RS24785 (IPV39_24790) | 5354072..5354602 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| IPV39_RS24790 (IPV39_24795) | 5354599..5355540 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| IPV39_RS24795 (IPV39_24800) | 5355545..5356873 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| IPV39_RS24800 (IPV39_24805) | 5356902..5357339 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| IPV39_RS24805 | 5358261..5358650 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| IPV39_RS24810 (IPV39_24815) | 5358725..5358901 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| IPV39_RS30750 | 5358903..5359037 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| IPV39_RS24815 (IPV39_24820) | 5359362..5359841 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| IPV39_RS24820 (IPV39_24825) | 5359979..5360137 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| IPV39_RS24825 (IPV39_24830) | 5360211..5360408 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| IPV39_RS24830 (IPV39_24835) | 5360893..5361600 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| IPV39_RS24835 (IPV39_24840) | 5361836..5362186 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| IPV39_RS24840 (IPV39_24845) | 5362243..5362854 | + | 612 | Protein_4921 | DUF3275 family protein | - |
| IPV39_RS24845 (IPV39_24850) | 5363137..5363499 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| IPV39_RS24850 (IPV39_24855) | 5363567..5363821 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| IPV39_RS24855 (IPV39_24860) | 5363914..5364519 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| IPV39_RS24860 (IPV39_24865) | 5364549..5365994 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| IPV39_RS24865 (IPV39_24870) | 5366099..5368348 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| IPV39_RS24870 (IPV39_24875) | 5368373..5368756 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| IPV39_RS24875 (IPV39_24880) | 5368962..5369255 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| IPV39_RS24880 (IPV39_24885) | 5369252..5370118 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| IPV39_RS24885 (IPV39_24890) | 5370378..5371070 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| IPV39_RS24890 (IPV39_24895) | 5371081..5371836 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| IPV39_RS24895 (IPV39_24900) | 5371821..5372402 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| IPV39_RS24900 (IPV39_24905) | 5372399..5372899 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| IPV39_RS24905 (IPV39_24910) | 5372908..5373177 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| IPV39_RS24910 (IPV39_24915) | 5373181..5375412 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| IPV39_RS24915 (IPV39_24920) | 5375412..5376158 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| IPV39_RS24920 (IPV39_24925) | 5376176..5376667 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| IPV39_RS24925 (IPV39_24930) | 5376908..5378389 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| IPV39_RS24930 (IPV39_24935) | 5378521..5379630 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| IPV39_RS24935 (IPV39_24940) | 5379675..5379941 | - | 267 | WP_223703940.1 | DUF2845 domain-containing protein | - |
| IPV39_RS24940 (IPV39_24945) | 5380159..5380458 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| IPV39_RS24945 (IPV39_24950) | 5380552..5380890 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| IPV39_RS24950 (IPV39_24955) | 5380887..5381126 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| IPV39_RS24955 (IPV39_24960) | 5381144..5381500 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| IPV39_RS24960 (IPV39_24965) | 5381511..5381897 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| IPV39_RS24965 (IPV39_24970) | 5381894..5382553 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| IPV39_RS24970 (IPV39_24975) | 5382550..5383434 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| IPV39_RS24975 (IPV39_24980) | 5383418..5384923 | + | 1506 | WP_243496775.1 | TIGR03752 family integrating conjugative element protein | - |
| IPV39_RS24980 (IPV39_24985) | 5384901..5385344 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| IPV39_RS24985 (IPV39_24990) | 5385344..5388286 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| IPV39_RS24990 (IPV39_24995) | 5388283..5388567 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| IPV39_RS24995 (IPV39_25000) | 5388564..5389223 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| IPV39_RS25000 (IPV39_25005) | 5389220..5389438 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| IPV39_RS25005 (IPV39_25010) | 5391579..5392010 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| IPV39_RS25010 (IPV39_25015) | 5392010..5392948 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| IPV39_RS25015 (IPV39_25020) | 5392966..5394348 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| IPV39_RS25020 (IPV39_25025) | 5394348..5394695 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| IPV39_RS25025 (IPV39_25030) | 5394692..5396206 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| IPV39_RS25030 (IPV39_25035) | 5396263..5396601 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| IPV39_RS25035 (IPV39_25040) | 5396720..5396992 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| IPV39_RS25040 (IPV39_25045) | 5396996..5397346 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IPV39_RS25045 (IPV39_25050) | 5397757..5400216 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| IPV39_RS25050 (IPV39_25055) | 5400504..5402231 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| IPV39_RS25055 (IPV39_25060) | 5402242..5403255 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| IPV39_RS25060 (IPV39_25065) | 5403797..5405716 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| IPV39_RS25065 (IPV39_25070) | 5405713..5406993 | + | 1281 | WP_023083793.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IPV39_RS25085 (IPV39_25090) | 5407846..5410410 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| IPV39_RS25090 (IPV39_25095) | 5410566..5411294 | - | 729 | WP_023086644.1 | peptidoglycan editing factor PgeF | - |
| IPV39_RS25095 (IPV39_25100) | 5411291..5412253 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|