MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89201 bp
Accession: NZ_CP063394 Location: 5318685..5407885 Organism: Pseudomonas aeruginosa strain ST167_d67burn1 Replicon: chromosome
Accession: NZ_CP063394 Location: 5318685..5407885 Organism: Pseudomonas aeruginosa strain ST167_d67burn1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IPV40_RS24570 (IPV40_24570) | 5314257..5318456 | + | 4200 | WP_003455748.1 | two-partner secretion system exoprotein TpsA4 | - |
| IPV40_RS24580 (IPV40_24580) | 5318822..5319688 | + | 867 | WP_003111785.1 | ParA family protein | - |
| IPV40_RS24585 (IPV40_24585) | 5319690..5320427 | + | 738 | WP_004347984.1 | hypothetical protein | - |
| IPV40_RS24590 (IPV40_24590) | 5320424..5320921 | + | 498 | WP_003111783.1 | hypothetical protein | - |
| IPV40_RS24595 (IPV40_24595) | 5320918..5321748 | + | 831 | WP_004352853.1 | hypothetical protein | - |
| IPV40_RS24600 (IPV40_24600) | 5321745..5322431 | + | 687 | WP_003122071.1 | hypothetical protein | - |
| IPV40_RS24605 (IPV40_24605) | 5322431..5323132 | + | 702 | WP_004347982.1 | DUF2786 domain-containing protein | - |
| IPV40_RS24610 (IPV40_24610) | 5323129..5323836 | + | 708 | WP_004352852.1 | HNH endonuclease signature motif containing protein | - |
| IPV40_RS24615 (IPV40_24615) | 5323820..5324038 | + | 219 | WP_003122068.1 | hypothetical protein | - |
| IPV40_RS24620 (IPV40_24620) | 5324035..5325378 | + | 1344 | WP_019486079.1 | replicative DNA helicase | - |
| IPV40_RS24625 (IPV40_24625) | 5325817..5326263 | - | 447 | WP_031631896.1 | hypothetical protein | - |
| IPV40_RS24630 (IPV40_24630) | 5326441..5326626 | + | 186 | WP_023083214.1 | hypothetical protein | - |
| IPV40_RS24635 (IPV40_24635) | 5326616..5327143 | + | 528 | WP_004352849.1 | hypothetical protein | - |
| IPV40_RS24640 (IPV40_24640) | 5327140..5327397 | + | 258 | WP_004352848.1 | hypothetical protein | - |
| IPV40_RS24645 (IPV40_24645) | 5327390..5327632 | + | 243 | WP_023083215.1 | hypothetical protein | - |
| IPV40_RS24650 (IPV40_24650) | 5327625..5327858 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| IPV40_RS24655 (IPV40_24655) | 5327858..5328874 | + | 1017 | WP_004352847.1 | nucleoid-associated protein YejK | - |
| IPV40_RS24660 (IPV40_24660) | 5328877..5329131 | + | 255 | WP_009316384.1 | Arc family DNA-binding protein | - |
| IPV40_RS24665 (IPV40_24665) | 5329128..5330864 | + | 1737 | WP_004352845.1 | ParB family protein | - |
| IPV40_RS24670 (IPV40_24670) | 5330892..5331659 | + | 768 | WP_004352844.1 | DUF2857 domain-containing protein | - |
| IPV40_RS24675 (IPV40_24675) | 5331656..5332927 | + | 1272 | WP_023083217.1 | STY4528 family pathogenicity island replication protein | - |
| IPV40_RS24680 | 5332924..5333721 | + | 798 | WP_235597565.1 | hypothetical protein | - |
| IPV40_RS24685 (IPV40_24685) | 5333878..5334606 | + | 729 | WP_004352842.1 | TIGR03761 family integrating conjugative element protein | - |
| IPV40_RS24690 (IPV40_24690) | 5334612..5335160 | + | 549 | WP_004352841.1 | DUF3158 family protein | - |
| IPV40_RS24695 (IPV40_24695) | 5335207..5336046 | + | 840 | WP_003105750.1 | Rha family transcriptional regulator | - |
| IPV40_RS24700 (IPV40_24700) | 5336076..5336564 | + | 489 | WP_004352840.1 | single-stranded DNA-binding protein | - |
| IPV40_RS24705 (IPV40_24705) | 5336720..5336887 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| IPV40_RS24710 (IPV40_24710) | 5336953..5337171 | - | 219 | WP_023083218.1 | hypothetical protein | - |
| IPV40_RS24715 (IPV40_24715) | 5337185..5337382 | - | 198 | WP_023083219.1 | hypothetical protein | - |
| IPV40_RS24720 (IPV40_24720) | 5337398..5337808 | - | 411 | WP_003134109.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IPV40_RS24725 (IPV40_24725) | 5337808..5338038 | - | 231 | WP_031634724.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| IPV40_RS24730 (IPV40_24730) | 5338294..5340213 | + | 1920 | WP_004352838.1 | type I DNA topoisomerase | - |
| IPV40_RS24735 (IPV40_24735) | 5340521..5340730 | + | 210 | WP_003105733.1 | cold-shock protein | - |
| IPV40_RS24740 (IPV40_24740) | 5340951..5342840 | + | 1890 | WP_003105732.1 | hypothetical protein | - |
| IPV40_RS24745 (IPV40_24745) | 5342837..5344810 | + | 1974 | WP_003105731.1 | DEAD/DEAH box helicase | - |
| IPV40_RS24750 (IPV40_24750) | 5344932..5345714 | + | 783 | WP_004352836.1 | phage Gp37/Gp68 family protein | - |
| IPV40_RS24755 (IPV40_24755) | 5345747..5347000 | + | 1254 | WP_004352835.1 | three-Cys-motif partner protein TcmP | - |
| IPV40_RS24760 (IPV40_24760) | 5347174..5348298 | + | 1125 | WP_003099755.1 | hypothetical protein | VF |
| IPV40_RS24765 (IPV40_24765) | 5348298..5350007 | + | 1710 | WP_004352834.1 | hypothetical protein | VF |
| IPV40_RS24770 (IPV40_24770) | 5350011..5351336 | + | 1326 | WP_004352832.1 | type 4b pilus protein PilO2 | - |
| IPV40_RS24775 (IPV40_24775) | 5351326..5351859 | + | 534 | WP_004352829.1 | type IV pilus biogenesis protein PilP | - |
| IPV40_RS24780 (IPV40_24780) | 5351868..5353448 | + | 1581 | WP_003123334.1 | hypothetical protein | VF |
| IPV40_RS24785 (IPV40_24785) | 5353448..5354527 | + | 1080 | WP_003123335.1 | hypothetical protein | VF |
| IPV40_RS24790 (IPV40_24790) | 5354549..5355079 | + | 531 | WP_004352827.1 | hypothetical protein | VF |
| IPV40_RS24795 (IPV40_24795) | 5355076..5356017 | + | 942 | WP_004352826.1 | ATPase, T2SS/T4P/T4SS family | - |
| IPV40_RS24800 (IPV40_24800) | 5356022..5357350 | + | 1329 | WP_004352824.1 | hypothetical protein | VF |
| IPV40_RS24805 (IPV40_24805) | 5357379..5357816 | + | 438 | WP_004352822.1 | hypothetical protein | VF |
| IPV40_RS24810 | 5358738..5359127 | + | 390 | WP_004352820.1 | hypothetical protein | - |
| IPV40_RS24815 (IPV40_24815) | 5359202..5359378 | + | 177 | WP_015503587.1 | hypothetical protein | - |
| IPV40_RS30755 | 5359380..5359514 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| IPV40_RS24820 (IPV40_24820) | 5359839..5360318 | + | 480 | WP_003117056.1 | STY4534 family ICE replication protein | - |
| IPV40_RS24825 (IPV40_24825) | 5360456..5360614 | + | 159 | WP_003109368.1 | hypothetical protein | - |
| IPV40_RS24830 (IPV40_24830) | 5360688..5360885 | + | 198 | WP_015503588.1 | hypothetical protein | - |
| IPV40_RS24835 (IPV40_24835) | 5361370..5362077 | + | 708 | WP_004352808.1 | hypothetical protein | - |
| IPV40_RS24840 (IPV40_24840) | 5362313..5362663 | + | 351 | WP_004347949.1 | hypothetical protein | - |
| IPV40_RS24845 (IPV40_24845) | 5362720..5363331 | + | 612 | Protein_4922 | DUF3275 family protein | - |
| IPV40_RS24850 (IPV40_24850) | 5363614..5363976 | + | 363 | WP_003117061.1 | hypothetical protein | - |
| IPV40_RS24855 (IPV40_24855) | 5364044..5364298 | + | 255 | WP_003117062.1 | hypothetical protein | - |
| IPV40_RS24860 (IPV40_24860) | 5364391..5364996 | + | 606 | WP_003125296.1 | hypothetical protein | - |
| IPV40_RS24865 (IPV40_24865) | 5365026..5366471 | + | 1446 | WP_003125297.1 | DUF6094 domain-containing protein | - |
| IPV40_RS24870 (IPV40_24870) | 5366576..5368825 | + | 2250 | WP_023083221.1 | DEAD/DEAH box helicase | - |
| IPV40_RS24875 (IPV40_24875) | 5368850..5369233 | - | 384 | WP_123789178.1 | hypothetical protein | - |
| IPV40_RS24880 (IPV40_24880) | 5369439..5369732 | + | 294 | WP_021264362.1 | IS3 family transposase ISCARN64 | Transposase |
| IPV40_RS24885 (IPV40_24885) | 5369729..5370595 | + | 867 | WP_004352797.1 | IS3 family transposase ISPosp5 | Transposase |
| IPV40_RS24890 (IPV40_24890) | 5370855..5371547 | + | 693 | WP_004352794.1 | hypothetical protein | - |
| IPV40_RS24895 (IPV40_24895) | 5371558..5372313 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| IPV40_RS24900 (IPV40_24900) | 5372298..5372879 | + | 582 | WP_003123352.1 | hypothetical protein | VF |
| IPV40_RS24905 (IPV40_24905) | 5372876..5373376 | + | 501 | WP_004352788.1 | integrating conjugative element protein | - |
| IPV40_RS24910 (IPV40_24910) | 5373385..5373654 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| IPV40_RS24915 (IPV40_24915) | 5373658..5375889 | + | 2232 | WP_003159694.1 | type IV conjugative transfer system coupling protein TraD | - |
| IPV40_RS24920 (IPV40_24920) | 5375889..5376635 | + | 747 | WP_023083223.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| IPV40_RS24925 (IPV40_24925) | 5376653..5377144 | + | 492 | WP_031631905.1 | hypothetical protein | - |
| IPV40_RS24930 (IPV40_24930) | 5377385..5378866 | + | 1482 | WP_003109390.1 | UvrD-helicase domain-containing protein | - |
| IPV40_RS24935 (IPV40_24935) | 5378998..5380107 | + | 1110 | WP_003125327.1 | hypothetical protein | - |
| IPV40_RS24940 (IPV40_24940) | 5380152..5380418 | - | 267 | WP_223703940.1 | DUF2845 domain-containing protein | - |
| IPV40_RS24945 (IPV40_24945) | 5380636..5380935 | + | 300 | WP_003125328.1 | hypothetical protein | - |
| IPV40_RS24950 (IPV40_24950) | 5381029..5381367 | + | 339 | WP_016561610.1 | RAQPRD family integrative conjugative element protein | - |
| IPV40_RS24955 (IPV40_24955) | 5381364..5381603 | + | 240 | WP_003125330.1 | TIGR03758 family integrating conjugative element protein | - |
| IPV40_RS24960 (IPV40_24960) | 5381621..5381977 | + | 357 | WP_003159691.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| IPV40_RS24965 (IPV40_24965) | 5381988..5382374 | + | 387 | WP_003125333.1 | TIGR03750 family conjugal transfer protein | - |
| IPV40_RS24970 (IPV40_24970) | 5382371..5383030 | + | 660 | WP_003158155.1 | TIGR03746 family integrating conjugative element protein | - |
| IPV40_RS24975 (IPV40_24975) | 5383027..5383911 | + | 885 | WP_003125336.1 | TIGR03749 family integrating conjugative element protein | - |
| IPV40_RS24980 (IPV40_24980) | 5383895..5385400 | + | 1506 | WP_243496775.1 | TIGR03752 family integrating conjugative element protein | - |
| IPV40_RS24985 (IPV40_24985) | 5385378..5385821 | + | 444 | WP_023083781.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| IPV40_RS24990 (IPV40_24990) | 5385821..5388763 | + | 2943 | WP_023083782.1 | conjugative transfer ATPase | - |
| IPV40_RS24995 (IPV40_24995) | 5388760..5389044 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| IPV40_RS25000 (IPV40_25000) | 5389041..5389700 | + | 660 | WP_019484424.1 | DsbA family protein | - |
| IPV40_RS25005 (IPV40_25005) | 5389697..5389915 | - | 219 | WP_019484423.1 | hypothetical protein | - |
| IPV40_RS25010 (IPV40_25010) | 5392056..5392487 | + | 432 | WP_023083783.1 | TIGR03757 family integrating conjugative element protein | - |
| IPV40_RS25015 (IPV40_25015) | 5392487..5393425 | + | 939 | WP_019484421.1 | TIGR03756 family integrating conjugative element protein | - |
| IPV40_RS25020 (IPV40_25020) | 5393443..5394825 | + | 1383 | WP_023083784.1 | integrating conjugative element protein | - |
| IPV40_RS25025 (IPV40_25025) | 5394825..5395172 | + | 348 | WP_016851629.1 | hypothetical protein | - |
| IPV40_RS25030 (IPV40_25030) | 5395169..5396683 | + | 1515 | WP_023083785.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| IPV40_RS25035 (IPV40_25035) | 5396740..5397078 | - | 339 | WP_023083786.1 | hypothetical protein | - |
| IPV40_RS25040 (IPV40_25040) | 5397197..5397469 | + | 273 | WP_023083787.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| IPV40_RS25045 (IPV40_25045) | 5397473..5397823 | + | 351 | WP_023083788.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IPV40_RS25050 (IPV40_25050) | 5398234..5400693 | - | 2460 | WP_023083789.1 | ATP-binding protein | - |
| IPV40_RS25055 (IPV40_25055) | 5400981..5402708 | - | 1728 | WP_023083790.1 | ATP-binding protein | - |
| IPV40_RS25060 (IPV40_25060) | 5402719..5403732 | - | 1014 | WP_023083791.1 | SIR2 family protein | - |
| IPV40_RS25065 (IPV40_25065) | 5404274..5406193 | + | 1920 | WP_023083792.1 | MobH family relaxase | - |
| IPV40_RS25070 (IPV40_25070) | 5406190..5407470 | + | 1281 | WP_023083793.1 | hypothetical protein ; Integrase | Integrase |
| IPV40_RS25090 (IPV40_25090) | 5408323..5410887 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| IPV40_RS25095 (IPV40_25095) | 5411043..5411771 | - | 729 | WP_023086644.1 | peptidoglycan editing factor PgeF | - |
| IPV40_RS25100 (IPV40_25100) | 5411768..5412730 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|