MGE detailed information
MGE type: Prophage MGE length: 30169 bp
Accession: NZ_CP063332 Location: 599329..629497 Organism: Escherichia coli strain BS74R-D Replicon: chromosome
Accession: NZ_CP063332 Location: 599329..629497 Organism: Escherichia coli strain BS74R-D Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IN878_RS02950 () | 595844..596590 | + | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| IN878_RS02955 () | 596679..597365 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IN878_RS02960 () | 597542..597745 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IN878_RS02965 () | 597780..599240 | - | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IN878_RS02970 () | 599329..600612 | - | 1284 | Protein_586 | MHS family MFS transporter YdfJ | - |
| IN878_RS02975 () | 601216..601329 | + | 114 | WP_120795384.1 | hypothetical protein | - |
| IN878_RS02980 () | 601398..601631 | + | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IN878_RS02985 () | 601948..602538 | + | 591 | WP_000086522.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IN878_RS02990 () | 602636..603211 | - | 576 | WP_000885600.1 | tail fiber assembly protein | - |
| IN878_RS02995 () | 603211..603519 | - | 309 | WP_071524888.1 | phage tail protein | - |
| IN878_RS03000 () | 603486..603812 | - | 327 | Protein_592 | phage tail protein | - |
| IN878_RS03005 () | 603770..604315 | - | 546 | WP_000453589.1 | DNA-packaging protein | - |
| IN878_RS03010 () | 604704..604937 | + | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IN878_RS03015 () | 604995..605405 | + | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IN878_RS03020 () | 605557..605730 | - | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IN878_RS03025 () | 605902..606057 | - | 156 | WP_001309517.1 | hypothetical protein | - |
| IN878_RS03030 () | 606143..606839 | + | 697 | Protein_598 | IS1 family transposase IS1A | Transposase |
| IN878_RS03035 () | 606913..606978 | - | 66 | WP_120795388.1 | hypothetical protein | - |
| IN878_RS03040 () | 606981..607169 | - | 189 | WP_071524604.1 | cold-shock protein | - |
| IN878_RS03045 () | 607180..607392 | - | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IN878_RS03050 () | 607755..608252 | - | 498 | WP_203037271.1 | DUF2514 domain-containing protein | - |
| IN878_RS03055 () | 608249..608782 | - | 534 | WP_001092971.1 | lysozyme | - |
| IN878_RS03060 () | 608779..609090 | - | 312 | WP_203037270.1 | DUF1327 domain-containing protein | - |
| IN878_RS03065 () | 609095..609310 | - | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IN878_RS03070 () | 610064..610279 | - | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IN878_RS03075 () | 610580..610792 | + | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IN878_RS03080 () | 610847..610936 | + | 90 | WP_120795389.1 | hypothetical protein | - |
| IN878_RS03085 () | 611214..611966 | - | 753 | WP_001047135.1 | antitermination protein | - |
| IN878_RS03090 () | 611980..613029 | - | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IN878_RS03095 () | 613031..613309 | - | 279 | WP_012304870.1 | hypothetical protein | - |
| IN878_RS03100 () | 613376..613627 | - | 252 | WP_000980994.1 | hypothetical protein | - |
| IN878_RS03105 () | 613844..613999 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IN878_RS03110 () | 614071..614358 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IN878_RS03115 () | 614358..614597 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IN878_RS03120 () | 614622..614927 | + | 306 | WP_001326990.1 | hypothetical protein | - |
| IN878_RS03125 () | 615130..615462 | + | 333 | WP_001301033.1 | protein FlxA | - |
| IN878_RS03130 () | 615899..617212 | - | 1314 | WP_000589005.1 | ISNCY family transposase ISCARN112 | Transposase |
| IN878_RS03135 () | 617981..618268 | - | 288 | Protein_619 | hypothetical protein | - |
| IN878_RS03140 () | 618879..619235 | - | 357 | WP_001310834.1 | class I SAM-dependent methyltransferase | - |
| IN878_RS03145 () | 619232..619483 | - | 252 | Protein_621 | DUF977 family protein | - |
| IN878_RS03150 () | 619473..619853 | + | 381 | Protein_622 | hypothetical protein | - |
| IN878_RS03155 () | 619896..620792 | - | 897 | Protein_623 | IS3 family transposase ISSd1 | Transposase |
| IN878_RS03160 () | 620799..621950 | - | 1152 | WP_001254876.1 | IS30 family transposase IS30D | Transposase |
| IN878_RS03165 () | 622014..622274 | - | 261 | Protein_625 | IS3 family transposase ISSfl10 | Transposase |
| IN878_RS03170 () | 622337..623944 | + | 1608 | Protein_626 | 3'-5' exoribonuclease | - |
| IN878_RS03175 () | 624052..624729 | + | 678 | WP_001682408.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS03180 () | 624729..625076 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS03185 () | 625096..626667 | + | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| IN878_RS03190 () | 626724..626975 | + | 252 | WP_000005552.1 | excisionase family protein | - |
| IN878_RS03195 () | 627010..628290 | + | 1281 | WP_000876958.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IN878_RS03200 () | 628310..628420 | - | 111 | WP_001360138.1 | hypothetical protein | - |
| IN878_RS03205 () | 628478..629497 | - | 1020 | WP_001487242.1 | Zn-dependent oxidoreductase | - |
| IN878_RS03210 () | 629509..630723 | - | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| IN878_RS03215 () | 630934..631260 | - | 327 | WP_000598292.1 | YnfA family protein | - |
| IN878_RS03220 () | 631395..631736 | + | 342 | WP_000705211.1 | DUF1283 family protein | - |
| IN878_RS03225 () | 631771..632331 | + | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IN878_RS03230 () | 632334..633044 | - | 711 | WP_077758216.1 | YnfC family lipoprotein | - |
| IN878_RS03235 () | 633152..633457 | + | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|