MGE detailed information
MGE type: Conjugative plasmid MGE length: 159093 bp
Accession: NZ_CP063148 Location: 1..159093 Organism: Klebsiella pneumoniae strain KP19-3088 Replicon: plasmid pKP19-3088-159k
Accession: NZ_CP063148 Location: 1..159093 Organism: Klebsiella pneumoniae strain KP19-3088 Replicon: plasmid pKP19-3088-159k
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMY63_RS26120 () | 1..1020 | + | 1020 | WP_009652816.1 | replication initiation protein | - |
| IMY63_RS26125 () | 2005..2184 | + | 180 | Protein_2 | SOS response-associated peptidase | - |
| IMY63_RS26130 () | 2514..5321 | - | 2808 | WP_040228250.1 | DEAD/DEAH box helicase family protein | - |
| IMY63_RS26135 () | 5331..5831 | - | 501 | WP_040228248.1 | hypothetical protein | - |
| IMY63_RS26140 () | 5831..9046 | - | 3216 | WP_040228246.1 | DUF1156 domain-containing protein | - |
| IMY63_RS26145 () | 9057..10850 | - | 1794 | WP_064176592.1 | ATP-binding protein | - |
| IMY63_RS26150 () | 10858..11934 | - | 1077 | WP_040228241.1 | SIR2 family protein | - |
| IMY63_RS26155 () | 11941..12960 | - | 1020 | WP_040227127.1 | hypothetical protein | - |
| IMY63_RS26160 () | 12960..15077 | - | 2118 | WP_088903447.1 | DUF499 domain-containing protein | - |
| IMY63_RS26165 () | 15456..16073 | + | 618 | Protein_10 | replication protein | - |
| IMY63_RS26170 () | 16607..16885 | + | 279 | WP_013213990.1 | hypothetical protein | - |
| IMY63_RS26175 () | 16996..17421 | + | 426 | WP_013213989.1 | antirestriction protein | - |
| IMY63_RS26180 () | 17549..17704 | + | 156 | WP_013213988.1 | hypothetical protein | - |
| IMY63_RS26185 () | 17750..18046 | + | 297 | WP_013213987.1 | transcriptional regulator | - |
| IMY63_RS26190 () | 18150..19031 | + | 882 | Protein_15 | IS1182 family transposase ISKpn6 | Transposase |
| IMY63_RS26195 () | 19281..20162 | - | 882 | WP_004199234.1 | Carbapenem-hydrolyzing beta-lactamase KPC | ARG |
| IMY63_RS26200 () | 20438..21418 | - | 981 | WP_013213985.1 | IS481 family transposase ISKpn27 | Transposase |
| IMY63_RS26205 () | 21541..22098 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| IMY63_RS26210 () | 22261..25266 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IMY63_RS26215 () | 25313..25654 | + | 342 | WP_088903446.1 | HNH endonuclease | - |
| IMY63_RS26220 () | 25692..25970 | + | 279 | WP_020314648.1 | hypothetical protein | - |
| IMY63_RS26225 () | 26288..26899 | + | 612 | WP_020804876.1 | DUF2913 family protein | - |
| IMY63_RS26230 () | 26896..27849 | - | 954 | WP_020314639.1 | Recombination-promoting nuclease RpnA | VF |
| IMY63_RS26235 () | 27974..28237 | - | 264 | WP_088903441.1 | hypothetical protein | - |
| IMY63_RS26240 () | 28257..28877 | - | 621 | WP_020314642.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IMY63_RS26245 () | 29286..30689 | + | 1404 | WP_164722696.1 | DNA cytosine methyltransferase | - |
| IMY63_RS26250 () | 30724..31938 | - | 1215 | WP_148237948.1 | type II restriction endonuclease | - |
| IMY63_RS26255 () | 32246..34999 | + | 2754 | WP_075606932.1 | ABC transporter | - |
| IMY63_RS26260 () | 35105..35701 | - | 597 | WP_032635043.1 | Tn3 family transposase TnpR_ISYps3 | Transposase |
| IMY63_RS26265 () | 35954..36472 | - | 519 | WP_088903439.1 | hypothetical protein | - |
| IMY63_RS26270 () | 37377..38003 | + | 627 | WP_022644718.1 | ParA family protein | - |
| IMY63_RS26275 () | 38048..38275 | + | 228 | WP_020314634.1 | hypothetical protein | - |
| IMY63_RS26280 () | 38450..39724 | - | 1275 | WP_020314652.1 | Y-family DNA polymerase | - |
| IMY63_RS26285 () | 39736..40185 | - | 450 | WP_046960466.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMY63_RS26290 () | 40182..40427 | - | 246 | WP_020314635.1 | DinI-like family protein | - |
| IMY63_RS26295 () | 40631..40861 | + | 231 | WP_020314631.1 | hypothetical protein | - |
| IMY63_RS26300 () | 41031..41224 | + | 194 | Protein_37 | hypothetical protein | - |
| IMY63_RS26305 () | 41296..41886 | + | 591 | Protein_38 | DNA methylase | - |
| IMY63_RS26310 () | 41916..44813 | - | 2898 | WP_023307208.1 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| IMY63_RS26315 () | 44908..45513 | + | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| IMY63_RS26320 () | 46173..47354 | + | 1182 | WP_004194048.1 | Na+/H+ antiporter NhaA | - |
| IMY63_RS26325 () | 47781..48095 | - | 315 | WP_000091613.1 | hypothetical protein | - |
| IMY63_RS26330 () | 48350..48706 | - | 357 | WP_000215515.1 | cupin domain-containing protein | - |
| IMY63_RS26335 () | 48696..49097 | - | 402 | WP_001293886.1 | DUF86 domain-containing protein | - |
| IMY63_RS26340 () | 49094..49384 | - | 291 | WP_001247892.1 | nucleotidyltransferase | - |
| IMY63_RS26345 () | 49459..52425 | + | 2967 | WP_003100881.1 | Tn3 family transposase TnpA_ISPa38 | Transposase |
| IMY63_RS26350 () | 52504..53508 | + | 1005 | WP_000427623.1 | IS110 family transposase IS4321R | Transposase |
| IMY63_RS26355 () | 53690..53893 | - | 204 | WP_004197809.1 | hypothetical protein | - |
| IMY63_RS26360 () | 53907..54110 | - | 204 | WP_004197808.1 | hemolysin expression modulator Hha | - |
| IMY63_RS26365 () | 54144..54512 | - | 369 | WP_004197807.1 | hypothetical protein | - |
| IMY63_RS26370 () | 54556..55050 | - | 495 | WP_020805591.1 | hypothetical protein | - |
| IMY63_RS26375 () | 55081..55653 | - | 573 | WP_020805590.1 | hypothetical protein | - |
| IMY63_RS26380 () | 55650..55898 | - | 249 | WP_000272716.1 | hypothetical protein | - |
| IMY63_RS26385 () | 56335..57024 | + | 690 | WP_020315560.1 | RES family NAD+ phosphorylase | - |
| IMY63_RS26390 () | 57056..57745 | - | 690 | WP_004193995.1 | hypothetical protein | - |
| IMY63_RS26395 () | 58012..58267 | + | 256 | Protein_56 | hypothetical protein | - |
| IMY63_RS26400 () | 58995..59243 | + | 249 | WP_053389907.1 | hypothetical protein | - |
| IMY63_RS26405 () | 59297..59911 | - | 615 | WP_053389911.1 | hypothetical protein | - |
| IMY63_RS26410 () | 60421..60675 | + | 255 | Protein_59 | hypothetical protein | - |
| IMY63_RS26415 () | 60845..61063 | + | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IMY63_RS26420 () | 61065..61370 | + | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IMY63_RS26425 () | 61539..61934 | + | 396 | WP_162269742.1 | hypothetical protein | - |
| IMY63_RS26430 () | 61961..62275 | + | 315 | WP_053389906.1 | hypothetical protein | - |
| IMY63_RS26435 () | 62286..63302 | + | 1017 | WP_017899884.1 | hypothetical protein | - |
| IMY63_RS26440 () | 63500..64294 | + | 795 | WP_053389905.1 | site-specific integrase | - |
| IMY63_RS26445 () | 64726..64905 | - | 180 | WP_006788217.1 | hypothetical protein | - |
| IMY63_RS26450 () | 65025..65651 | - | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| IMY63_RS26455 () | 66260..67135 | - | 876 | WP_004098982.1 | RepB family plasmid replication initiator protein | - |
| IMY63_RS26460 () | 67547..68524 | - | 978 | Protein_69 | translesion error-prone DNA polymerase V subunit UmuC | - |
| IMY63_RS26465 () | 68954..70372 | - | 1419 | WP_137922721.1 | Outer membrane protein OprJ | VF |
| IMY63_RS26470 () | 70392..73526 | - | 3135 | WP_027591160.1 | Multidrug resistance protein MexB | VF |
| IMY63_RS26475 () | 73542..74705 | - | 1164 | WP_088903431.1 | Multidrug efflux pump subunit AcrA | VF |
| IMY63_RS26480 () | 75019..75993 | - | 975 | WP_088903445.1 | IS5 family transposase IS881 | Transposase |
| IMY63_RS26485 () | 76039..76596 | + | 558 | WP_088903444.1 | transcriptional regulator | - |
| IMY63_RS26490 () | 77037..79727 | + | 2691 | WP_058131653.1 | AAA family ATPase | - |
| IMY63_RS26495 () | 79795..80217 | - | 423 | WP_003152689.1 | hypothetical protein | - |
| IMY63_RS26500 () | 80240..82279 | - | 2040 | WP_034039551.1 | hypothetical protein | - |
| IMY63_RS26505 () | 82276..84006 | - | 1731 | WP_034039553.1 | site-specific integrase | - |
| IMY63_RS26510 () | 83999..85288 | - | 1290 | WP_034039555.1 | site-specific integrase | - |
| IMY63_RS26515 () | 85365..85667 | - | 303 | Protein_80 | DNA polymerase V subunit UmuC | - |
| IMY63_RS26520 () | 85667..86098 | - | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| IMY63_RS26525 () | 86504..87991 | + | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| IMY63_RS26530 () | 88240..89211 | + | 972 | WP_004152353.1 | mediator of plasmid stability | - |
| IMY63_RS26535 () | 89214..89885 | + | 672 | WP_053390142.1 | plasmid partitioning/stability family protein | - |
| IMY63_RS26540 () | 89949..90179 | + | 231 | WP_023329036.1 | hypothetical protein | - |
| IMY63_RS26545 () | 90616..91317 | + | 702 | WP_004152355.1 | DNA methylase | - |
| IMY63_RS26550 () | 91317..91538 | + | 222 | WP_001568042.1 | hypothetical protein | - |
| IMY63_RS26555 () | 91548..91967 | + | 420 | WP_053390283.1 | DUF1380 domain-containing protein | - |
| IMY63_RS26560 () | 92021..92788 | + | 768 | WP_110522032.1 | hypothetical protein | - |
| IMY63_RS26565 () | 93469..93897 | + | 429 | WP_001568045.1 | antirestriction protein | - |
| IMY63_RS26570 () | 93940..94446 | + | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| IMY63_RS26575 () | 94489..94680 | + | 192 | WP_001568047.1 | hypothetical protein | - |
| IMY63_RS26580 () | 94868..95122 | + | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| IMY63_RS26585 () | 95157..95477 | + | 321 | WP_001568049.1 | hypothetical protein | - |
| IMY63_RS26590 () | 96157..96384 | + | 228 | WP_001568050.1 | hypothetical protein | - |
| IMY63_RS26595 () | 96476..96706 | + | 231 | WP_001568051.1 | hypothetical protein | - |
| IMY63_RS26600 () | 96758..98113 | + | 1356 | WP_053390261.1 | DUF3560 domain-containing protein | - |
| IMY63_RS26605 () | 98161..98724 | + | 564 | WP_004152756.1 | methyltransferase | - |
| IMY63_RS26610 () | 99555..100097 | + | 543 | WP_014343512.1 | single-stranded DNA-binding protein | - |
| IMY63_RS26615 () | 100146..100394 | + | 249 | WP_009310026.1 | DUF905 domain-containing protein | - |
| IMY63_RS26620 () | 100464..102521 | + | 2058 | WP_009310025.1 | ParB/RepB/Spo0J family partition protein | - |
| IMY63_RS26625 () | 102566..102997 | + | 432 | WP_020804497.1 | conjugation system SOS inhibitor PsiB | - |
| IMY63_RS26630 () | 102994..103722 | + | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| IMY63_RS26635 () | 103719..104045 | + | 327 | WP_001568059.1 | hypothetical protein | - |
| IMY63_RS26640 () | 104101..104475 | + | 375 | WP_023280872.1 | hypothetical protein | - |
| IMY63_RS26645 () | 104676..106051 | + | 1376 | WP_100250078.1 | IS3 family transposase ISKpn8 | Transposase |
| IMY63_RS26650 () | 106221..107261 | + | 1041 | WP_009310020.1 | ATP-binding protein | - |
| IMY63_RS26655 () | 107467..109749 | + | 2283 | WP_162859354.1 | S8 family peptidase | - |
| IMY63_RS26660 () | 110125..110283 | + | 159 | WP_014343509.1 | type I toxin-antitoxin system Hok family toxin | - |
| IMY63_RS26665 () | 110649..111053 | + | 405 | WP_053390087.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY63_RS26670 () | 111050..111397 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY63_RS26675 () | 111446..112984 | + | 1539 | WP_048213845.1 | IS66 family transposase ISKpn24 | Transposase |
| IMY63_RS26680 () | 113443..113715 | + | 273 | WP_023287105.1 | hypothetical protein | - |
| IMY63_RS26685 () | 113712..114062 | + | 351 | WP_023287104.1 | hypothetical protein | - |
| IMY63_RS26690 () | 114694..115050 | + | 357 | WP_019706019.1 | hypothetical protein | - |
| IMY63_RS26695 () | 115111..115323 | + | 213 | WP_019706020.1 | hypothetical protein | - |
| IMY63_RS26700 () | 115334..115558 | + | 225 | WP_014343499.1 | hypothetical protein | - |
| IMY63_RS26705 () | 115639..115959 | + | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IMY63_RS26710 () | 115949..116227 | + | 279 | WP_004152721.1 | helix-turn-helix domain-containing protein | - |
| IMY63_RS26715 () | 116228..116641 | + | 414 | WP_023287139.1 | helix-turn-helix domain-containing protein | - |
| IMY63_RS26720 () | 117471..118292 | + | 822 | WP_004152492.1 | DUF945 domain-containing protein | - |
| IMY63_RS26725 () | 118325..118654 | + | 330 | WP_053390269.1 | hypothetical protein | - |
| IMY63_RS26730 () | 118687..119172 | - | 486 | WP_001568108.1 | hypothetical protein | VF |
| IMY63_RS26735 () | 119606..119998 | + | 393 | WP_053390193.1 | relaxosome protein TraM | - |
| IMY63_RS26740 () | 120236..120937 | + | 702 | WP_094898581.1 | hypothetical protein | - |
| IMY63_RS26745 () | 121098..121259 | + | 162 | WP_172686697.1 | TraY domain-containing protein | - |
| IMY63_RS26750 () | 121324..121692 | + | 369 | WP_064386081.1 | type IV conjugative transfer system pilin TraA | - |
| IMY63_RS26755 () | 121706..122011 | + | 306 | WP_064343526.1 | type IV conjugative transfer system protein TraL | - |
| IMY63_RS26760 () | 122027..122593 | + | 567 | WP_064359954.1 | type IV conjugative transfer system protein TraE | - |
| IMY63_RS26765 () | 122580..123314 | + | 735 | WP_064343528.1 | type-F conjugative transfer system secretin TraK | - |
| IMY63_RS26770 () | 123314..124735 | + | 1422 | WP_053390199.1 | conjugal transfer protein TraB | - |
| IMY63_RS26775 () | 124728..125162 | + | 435 | WP_020322358.1 | TraP protein | - |
| IMY63_RS26780 () | 125196..125780 | + | 585 | WP_064343530.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IMY63_RS26785 () | 126393..126581 | + | 189 | WP_053390286.1 | hypothetical protein | - |
| IMY63_RS26790 () | 126848..127066 | + | 219 | WP_087498964.1 | hypothetical protein | - |
| IMY63_RS26795 () | 127063..127362 | + | 300 | WP_181726264.1 | hypothetical protein | - |
| IMY63_RS26800 () | 127450..127833 | + | 384 | WP_042946290.1 | hypothetical protein | - |
| IMY63_RS26805 () | 127926..130565 | + | 2640 | WP_064343533.1 | type IV secretion system protein TraC | - |
| IMY63_RS26810 () | 130565..130957 | + | 393 | WP_064343534.1 | type-F conjugative transfer system protein TrbI | - |
| IMY63_RS26815 () | 130954..131580 | + | 627 | WP_064343535.1 | type-F conjugative transfer system protein TraW | - |
| IMY63_RS26820 () | 131591..132583 | + | 993 | WP_053390276.1 | conjugal transfer pilus assembly protein TraU | - |
| IMY63_RS26825 () | 132596..133243 | + | 648 | WP_064343536.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| IMY63_RS26830 () | 133240..133623 | + | 384 | WP_053390297.1 | hypothetical protein | - |
| IMY63_RS26835 () | 133620..135575 | + | 1956 | WP_064343537.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| IMY63_RS26840 () | 135607..135867 | + | 261 | WP_053390216.1 | hypothetical protein | - |
| IMY63_RS26845 () | 135860..136471 | + | 612 | WP_053390217.1 | hypothetical protein | - |
| IMY63_RS26850 () | 136461..136703 | + | 243 | WP_053390218.1 | conjugal transfer protein TrbE | - |
| IMY63_RS26855 () | 136749..137075 | + | 327 | WP_053390219.1 | hypothetical protein | - |
| IMY63_RS26860 () | 137096..137848 | + | 753 | WP_053390220.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| IMY63_RS26865 () | 137859..138095 | + | 237 | WP_053390221.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IMY63_RS26870 () | 138070..138630 | + | 561 | WP_039698500.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| IMY63_RS26875 () | 138617..139987 | + | 1371 | WP_075606918.1 | conjugal transfer protein TraH | - |
| IMY63_RS26880 () | 139987..142866 | + | 2880 | WP_064386194.1 | conjugal transfer mating pair stabilization protein TraG | - |
| IMY63_RS26885 () | 142883..143551 | + | 669 | WP_128317877.1 | hypothetical protein | - |
| IMY63_RS26890 () | 143910..144641 | + | 732 | WP_064386198.1 | complement resistance protein TraT | - |
| IMY63_RS26895 () | 145139..145525 | + | 387 | WP_053390238.1 | hypothetical protein | - |
| IMY63_RS26900 () | 145644..147962 | + | 2319 | WP_075606915.1 | type IV conjugative transfer system coupling protein TraD | - |
| IMY63_RS26905 () | 147962..153220 | + | 5259 | WP_075606914.1 | Multifunctional conjugation protein TraI | Relaxase |
| IMY63_RS26910 () | 153303..154028 | + | 726 | WP_064386205.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| IMY63_RS26915 () | 154185..154775 | + | 591 | WP_009651737.1 | fertility inhibition protein FinO | - |
| IMY63_RS26920 () | 154925..155716 | + | 792 | WP_075606913.1 | DsbA family protein | - |
| IMY63_RS26925 () | 155846..156442 | + | 597 | WP_042927543.1 | hypothetical protein | - |
| IMY63_RS26930 () | 156512..157156 | + | 645 | WP_042927545.1 | hypothetical protein | - |
| IMY63_RS26935 () | 157212..157838 | + | 627 | WP_009652809.1 | DUF2726 domain-containing protein | - |
| IMY63_RS26940 () | 157835..158401 | + | 567 | WP_052544827.1 | Phospholipase D | VF |
| IMY63_RS26945 () | 158534..158800 | + | 267 | WP_042927547.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|