MGE detailed information
MGE type: Prophage MGE length: 32594 bp
Accession: NZ_CP063056 Location: 541023..573616 Organism: Rodentibacter sp. DSM 111151 Replicon: chromosome
Accession: NZ_CP063056 Location: 541023..573616 Organism: Rodentibacter sp. DSM 111151 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHV77_RS02620 () | 536597..537118 | - | 522 | WP_194812607.1 | Fe-S protein assembly co-chaperone HscB | - |
| IHV77_RS02625 () | 537130..537453 | - | 324 | WP_194812608.1 | iron-sulfur cluster assembly protein IscA | - |
| IHV77_RS02630 () | 537508..537891 | - | 384 | WP_194812609.1 | Fe-S cluster assembly scaffold IscU | - |
| IHV77_RS02635 () | 537964..539178 | - | 1215 | WP_194812610.1 | IscS subfamily cysteine desulfurase | - |
| IHV77_RS02640 () | 539243..539692 | - | 450 | WP_194812611.1 | Fe-S cluster assembly transcriptional regulator IscR | - |
| IHV77_RS02645 () | 539744..540487 | - | 744 | WP_194813205.1 | tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ | - |
| IHV77_RS02655 () | 541023..542036 | - | 1014 | WP_194812612.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IHV77_RS02660 () | 542023..542718 | - | 696 | WP_194812613.1 | hypothetical protein | - |
| IHV77_RS02665 () | 542719..542922 | - | 204 | WP_194812614.1 | membrane protein insertion efficiency factor YidD | - |
| IHV77_RS02670 () | 542922..543164 | - | 243 | WP_194812615.1 | DUF4177 domain-containing protein | - |
| IHV77_RS02675 () | 543176..543736 | - | 561 | WP_194812616.1 | hypothetical protein | - |
| IHV77_RS02680 () | 543743..543925 | - | 183 | WP_194812617.1 | hypothetical protein | - |
| IHV77_RS02685 () | 543925..544521 | - | 597 | WP_194812618.1 | phage repressor protein CI | - |
| IHV77_RS02690 () | 544534..544935 | - | 402 | WP_194812619.1 | helix-turn-helix domain-containing protein | - |
| IHV77_RS02695 () | 545056..545223 | + | 168 | WP_194812620.1 | hypothetical protein | - |
| IHV77_RS02700 () | 545220..545513 | + | 294 | WP_194812621.1 | DNA-binding protein | - |
| IHV77_RS02705 () | 545544..546002 | - | 459 | WP_194812622.1 | hypothetical protein | - |
| IHV77_RS02710 () | 546172..546420 | - | 249 | WP_194812623.1 | hypothetical protein | - |
| IHV77_RS02715 () | 546510..546881 | + | 372 | WP_194812624.1 | hypothetical protein | - |
| IHV77_RS02720 () | 546878..547075 | + | 198 | WP_194812625.1 | hypothetical protein | - |
| IHV77_RS02725 () | 547086..547283 | + | 198 | WP_194812626.1 | hypothetical protein | - |
| IHV77_RS02730 () | 547295..547567 | + | 273 | WP_194812627.1 | hypothetical protein | - |
| IHV77_RS02735 () | 547619..547882 | + | 264 | WP_194812628.1 | hypothetical protein | - |
| IHV77_RS02740 () | 547886..550210 | + | 2325 | WP_194812629.1 | replication endonuclease | - |
| IHV77_RS02745 () | 550223..550546 | + | 324 | WP_194812630.1 | hypothetical protein | - |
| IHV77_RS02750 () | 550556..551071 | + | 516 | WP_194812631.1 | phage N-6-adenine-methyltransferase | - |
| IHV77_RS02755 () | 551138..551356 | + | 219 | WP_194812632.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| IHV77_RS02760 () | 551389..551790 | + | 402 | WP_194812633.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| IHV77_RS02765 () | 551802..552077 | - | 276 | WP_194812634.1 | ogr/Delta-like zinc finger family protein | - |
| IHV77_RS02770 () | 552157..553194 | - | 1038 | WP_194812635.1 | phage portal protein | - |
| IHV77_RS02775 () | 553184..555004 | - | 1821 | WP_194812636.1 | terminase ATPase subunit family protein | - |
| IHV77_RS02780 () | 555207..556064 | + | 858 | WP_194812637.1 | GPO family capsid scaffolding protein | - |
| IHV77_RS02785 () | 556068..557084 | + | 1017 | WP_194812638.1 | phage major capsid protein, P2 family | - |
| IHV77_RS02790 () | 557097..557945 | + | 849 | WP_194812639.1 | terminase endonuclease subunit | - |
| IHV77_RS02795 () | 557938..558390 | + | 453 | WP_194812640.1 | head completion/stabilization protein | - |
| IHV77_RS02800 () | 558378..558860 | + | 483 | WP_194812641.1 | phage tail protein | - |
| IHV77_RS02805 () | 558857..559582 | + | 726 | WP_194812642.1 | phage virion morphogenesis protein | - |
| IHV77_RS02810 () | 559834..560964 | + | 1131 | WP_194812643.1 | DUF2586 domain-containing protein | - |
| IHV77_RS02815 () | 560968..561420 | + | 453 | WP_194812644.1 | DUF2597 family protein | - |
| IHV77_RS02820 () | 561511..561744 | + | 234 | WP_194812645.1 | phage holin family protein | - |
| IHV77_RS02825 () | 561737..562297 | + | 561 | WP_194812646.1 | lysozyme | - |
| IHV77_RS02830 () | 562298..562627 | + | 330 | Protein_554 | hypothetical protein | - |
| IHV77_RS02835 () | 562820..563128 | + | 309 | WP_194812647.1 | putative phage tail assembly chaperone | - |
| IHV77_RS02840 () | 563137..563307 | + | 171 | WP_194813304.1 | hypothetical protein | - |
| IHV77_RS02845 () | 563317..565431 | + | 2115 | WP_194812648.1 | phage tail tape measure protein | - |
| IHV77_RS02850 () | 565435..565770 | + | 336 | WP_194812649.1 | DUF2590 family protein | - |
| IHV77_RS02855 () | 565763..566932 | + | 1170 | WP_194812650.1 | baseplate J/gp47 family protein | - |
| IHV77_RS02860 () | 566942..567466 | + | 525 | WP_194812651.1 | phage tail protein | - |
| IHV77_RS02865 () | 567495..568760 | + | 1266 | Protein_561 | phage tail protein | - |
| IHV77_RS02870 () | 569760..570353 | + | 594 | WP_194812652.1 | phage tail protein | - |
| IHV77_RS02875 () | 570338..570613 | + | 276 | WP_194812653.1 | hypothetical protein | - |
| IHV77_RS02880 () | 570629..571390 | + | 762 | WP_194812654.1 | hypothetical protein | - |
| IHV77_RS02885 () | 571383..572018 | + | 636 | WP_194812655.1 | hypothetical protein | - |
| IHV77_RS02890 () | 572015..573616 | + | 1602 | WP_194812656.1 | hypothetical protein | - |
| IHV77_RS02895 () | 573706..573966 | + | 261 | WP_194812657.1 | DinI-like family protein | - |
| IHV77_RS02915 () | 575300..576187 | - | 888 | WP_194812658.1 | protease modulator HflC | - |
| IHV77_RS02920 () | 576187..577401 | - | 1215 | WP_194812659.1 | FtsH protease activity modulator HflK | - |
| IHV77_RS02925 () | 577497..578204 | - | 708 | WP_194812660.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|