MGE detailed information
MGE type: Prophage MGE length: 46806 bp
Accession: NZ_CP063046 Location: 1813753..1860558 Organism: Escherichia coli strain KC-Dl-1 Replicon: chromosome
Accession: NZ_CP063046 Location: 1813753..1860558 Organism: Escherichia coli strain KC-Dl-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IL980_RS08700 () | 1808949..1810997 | + | 2049 | WP_000149529.1 | FAD-binding protein | - |
| IL980_RS08705 () | 1811103..1812086 | + | 984 | WP_000235524.1 | quinone oxidoreductase | - |
| IL980_RS08710 () | 1812251..1812493 | - | 243 | WP_000891396.1 | envelope stress response protein PspG | - |
| IL980_RS08715 () | 1812627..1813664 | - | 1038 | WP_001514813.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| IL980_RS08720 () | 1813753..1814850 | + | 1098 | WP_000332271.1 | dCTP deaminase ; Integrase | Integrase |
| IL980_RS08725 () | 1814912..1815160 | + | 249 | WP_021549952.1 | DinI-like family protein | - |
| IL980_RS08730 () | 1815297..1815626 | + | 330 | WP_071839816.1 | YkgJ family cysteine cluster protein | - |
| IL980_RS08735 () | 1815601..1816194 | - | 594 | WP_021549951.1 | DUF4376 domain-containing protein | - |
| IL980_RS08740 () | 1816202..1817359 | - | 1158 | WP_077768464.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IL980_RS08745 () | 1817360..1817472 | - | 113 | Protein_1712 | tail fiber assembly protein | - |
| IL980_RS08750 () | 1817492..1817785 | - | 294 | WP_059322008.1 | hypothetical protein | - |
| IL980_RS08755 () | 1817828..1817941 | - | 114 | Protein_1714 | tail fiber domain-containing protein | - |
| IL980_RS08760 () | 1817948..1818217 | - | 270 | WP_021549949.1 | hypothetical protein | - |
| IL980_RS08765 () | 1818217..1820571 | - | 2355 | WP_042013872.1 | prophage tail fiber N-terminal domain-containing protein | - |
| IL980_RS08770 () | 1820631..1821230 | - | 600 | WP_021549947.1 | Putative tyrosine-protein kinase in cps region | VF |
| IL980_RS08775 () | 1821298..1824777 | - | 3480 | WP_197613145.1 | host specificity protein J | - |
| IL980_RS08780 () | 1824838..1825473 | - | 636 | WP_063267675.1 | tail assembly protein | - |
| IL980_RS08785 () | 1825371..1826114 | - | 744 | WP_032157839.1 | C40 family peptidase | - |
| IL980_RS08790 () | 1826120..1826818 | - | 699 | WP_021549942.1 | phage minor tail protein L | - |
| IL980_RS08795 () | 1826818..1827147 | - | 330 | WP_021549941.1 | phage tail protein | - |
| IL980_RS08800 () | 1827144..1829706 | - | 2563 | Protein_1723 | phage tail tape measure protein | - |
| IL980_RS08805 () | 1829699..1830133 | - | 435 | WP_042013708.1 | phage tail assembly protein T | - |
| IL980_RS08810 () | 1830115..1830537 | - | 423 | WP_000479154.1 | phage minor tail protein G | - |
| IL980_RS08815 () | 1830553..1831293 | - | 741 | WP_001345558.1 | phage tail protein | - |
| IL980_RS08820 () | 1831301..1831696 | - | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| IL980_RS08825 () | 1831693..1832271 | - | 579 | WP_105272539.1 | phage tail protein | - |
| IL980_RS08830 () | 1832283..1832636 | - | 354 | WP_000753019.1 | head-tail joining protein | - |
| IL980_RS08835 () | 1832648..1833043 | - | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| IL980_RS08840 () | 1833085..1834110 | - | 1026 | WP_000063218.1 | major capsid protein | - |
| IL980_RS08845 () | 1834165..1834497 | - | 333 | WP_001338090.1 | head decoration protein | - |
| IL980_RS08850 () | 1834507..1835826 | - | 1320 | WP_000123331.1 | S49 family peptidase | - |
| IL980_RS08855 () | 1835807..1837408 | - | 1602 | WP_001552789.1 | phage portal protein | - |
| IL980_RS08860 () | 1837405..1837611 | - | 207 | WP_000198149.1 | gpW family protein | - |
| IL980_RS08865 () | 1837608..1839533 | - | 1926 | WP_197613146.1 | phage terminase large subunit family protein | - |
| IL980_RS08870 () | 1839508..1840053 | - | 546 | WP_000453587.1 | DNA-packaging protein | - |
| IL980_RS08875 () | 1840617..1840799 | - | 183 | WP_000881610.1 | hypothetical protein | - |
| IL980_RS08880 () | 1841006..1841332 | - | 327 | WP_000830178.1 | TonB family protein | - |
| IL980_RS08885 () | 1841821..1842105 | + | 285 | WP_016239223.1 | increased serum survival lipoprotein Iss | - |
| IL980_RS08890 () | 1842196..1842378 | - | 183 | WP_001228695.1 | prophage lysis lipoprotein RzoD | - |
| IL980_RS08895 () | 1842595..1843128 | - | 534 | WP_021549927.1 | lysozyme | - |
| IL980_RS08900 () | 1843263..1843502 | + | 240 | WP_021549926.1 | hypothetical protein | - |
| IL980_RS08905 () | 1843499..1843813 | - | 315 | WP_021549925.1 | DUF1327 domain-containing protein | - |
| IL980_RS08910 () | 1843818..1844033 | - | 216 | WP_024191044.1 | class II holin family protein | - |
| IL980_RS08920 () | 1845551..1845922 | - | 372 | WP_097293391.1 | antitermination protein Q | - |
| IL980_RS08925 () | 1845937..1846926 | - | 990 | WP_016241035.1 | DUF968 domain-containing protein | - |
| IL980_RS08930 () | 1846934..1847731 | - | 798 | WP_001061403.1 | KilA-N domain-containing protein | - |
| IL980_RS08935 () | 1847751..1848140 | - | 390 | WP_000767103.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IL980_RS08940 () | 1848137..1848463 | - | 327 | WP_021549921.1 | LexA repressor | - |
| IL980_RS08945 () | 1848463..1848957 | - | 495 | WP_072252362.1 | PerC family transcriptional regulator | - |
| IL980_RS08950 () | 1848954..1849895 | - | 942 | WP_021549919.1 | helix-turn-helix domain-containing protein | - |
| IL980_RS08955 () | 1849885..1850064 | - | 180 | WP_001188051.1 | DUF4222 domain-containing protein | - |
| IL980_RS08960 () | 1850240..1850824 | - | 585 | WP_000514174.1 | hypothetical protein | - |
| IL980_RS08965 () | 1850862..1851062 | - | 201 | WP_000205494.1 | cell division protein | - |
| IL980_RS08970 () | 1851160..1851786 | + | 627 | WP_000450740.1 | LexA family transcriptional regulator | - |
| IL980_RS08975 () | 1852002..1852515 | - | 514 | Protein_1757 | hypothetical protein | - |
| IL980_RS08980 () | 1852659..1852972 | + | 314 | Protein_1758 | hypothetical protein | - |
| IL980_RS08985 () | 1852987..1853349 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| IL980_RS08990 () | 1853415..1854239 | + | 825 | WP_000081295.1 | YfdQ family protein | - |
| IL980_RS08995 () | 1854368..1854904 | + | 537 | WP_000008178.1 | 5'-deoxynucleotidase | - |
| IL980_RS09000 () | 1854895..1855314 | + | 420 | WP_021549915.1 | hypothetical protein | - |
| IL980_RS09005 () | 1855311..1855610 | + | 300 | WP_021549914.1 | hypothetical protein | - |
| IL980_RS09010 () | 1855612..1856292 | + | 681 | WP_021549913.1 | ead/Ea22-like family protein | - |
| IL980_RS09015 () | 1856294..1856581 | + | 288 | WP_021549912.1 | hypothetical protein | - |
| IL980_RS09020 () | 1856585..1857181 | + | 597 | WP_021549911.1 | DUF551 domain-containing protein | - |
| IL980_RS09025 () | 1857181..1857753 | + | 573 | WP_021549910.1 | 3'-5' exoribonuclease | - |
| IL980_RS09030 () | 1857790..1858071 | + | 282 | WP_001093919.1 | pyocin activator PrtN family protein | - |
| IL980_RS09035 () | 1858119..1858292 | - | 174 | WP_021549909.1 | hypothetical protein | - |
| IL980_RS09040 () | 1858332..1858718 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| IL980_RS09045 () | 1858748..1859320 | - | 573 | WP_000458584.1 | SocA family protein | Antitoxin Detail |
| IL980_RS09050 () | 1859792..1860307 | + | 516 | WP_000416264.1 | zinc uptake transcriptional repressor Zur | - |
| IL980_RS09055 () | 1860349..1860558 | - | 210 | WP_001296638.1 | CsbD family protein | - |
| IL980_RS09060 () | 1860674..1861999 | - | 1326 | WP_001296637.1 | MATE family efflux transporter DinF | - |
| IL980_RS09065 () | 1862072..1862680 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| IL980_RS09070 () | 1862790..1863158 | - | 369 | WP_000002899.1 | diacylglycerol kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|