MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 149086 bp
Accession: NZ_CP062952 Location: 536132..685217 Organism: Bifidobacterium longum subsp. infantis strain JCM 11660 Replicon: chromosome
Accession: NZ_CP062952 Location: 536132..685217 Organism: Bifidobacterium longum subsp. infantis strain JCM 11660 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1660_RS02330 () | 532064..532405 | - | 342 | WP_117701166.1 | hypothetical protein | - |
| BL1660_RS02335 () | 532510..532806 | - | 297 | WP_117701164.1 | hypothetical protein | - |
| BL1660_RS02340 () | 533356..533532 | + | 177 | WP_161972092.1 | hypothetical protein | - |
| BL1660_RS02345 () | 533522..533731 | + | 210 | WP_032683779.1 | hypothetical protein | - |
| BL1660_RS02350 () | 533721..534230 | + | 510 | WP_117701162.1 | hypothetical protein | - |
| BL1660_RS02355 () | 534189..534398 | - | 210 | WP_131187342.1 | hypothetical protein | - |
| BL1660_RS02370 () | 534788..535081 | - | 294 | WP_193641218.1 | hypothetical protein | - |
| BL1660_RS02375 () | 535670..535858 | - | 189 | WP_193641151.1 | hypothetical protein | - |
| BL1660_RS02380 () | 535855..536067 | - | 213 | WP_193641152.1 | hypothetical protein | - |
| BL1660_RS02385 () | 536064..536342 | - | 279 | WP_023658290.1 | hypothetical protein | - |
| BL1660_RS02390 () | 536339..536581 | - | 243 | WP_193641153.1 | hypothetical protein | - |
| BL1660_RS02395 () | 536844..537089 | - | 246 | WP_193641154.1 | hypothetical protein | - |
| BL1660_RS02400 () | 537086..537445 | - | 360 | WP_193641155.1 | hypothetical protein | - |
| BL1660_RS02405 () | 537442..537735 | - | 294 | WP_193641156.1 | hypothetical protein | - |
| BL1660_RS02410 () | 537732..538016 | - | 285 | WP_131234433.1 | hypothetical protein | - |
| BL1660_RS02415 () | 538013..538180 | - | 168 | WP_131234434.1 | zinc ribbon domain-containing protein | - |
| BL1660_RS02420 () | 538177..538602 | - | 426 | WP_193641157.1 | hypothetical protein | - |
| BL1660_RS02425 () | 538599..539198 | - | 600 | WP_131234436.1 | hypothetical protein | - |
| BL1660_RS02430 () | 539191..539400 | - | 210 | WP_193641158.1 | hypothetical protein | - |
| BL1660_RS02435 () | 539384..539575 | - | 192 | WP_193641159.1 | hypothetical protein | - |
| BL1660_RS02440 () | 539575..540054 | - | 480 | WP_049136630.1 | hypothetical protein | - |
| BL1660_RS02445 () | 540048..540971 | - | 924 | WP_193641160.1 | hypothetical protein | - |
| BL1660_RS02450 () | 540971..541156 | - | 186 | WP_049136634.1 | hypothetical protein | - |
| BL1660_RS02455 () | 541143..541679 | - | 537 | WP_131217179.1 | hypothetical protein | - |
| BL1660_RS02460 () | 541831..542280 | - | 450 | WP_193641161.1 | hypothetical protein | - |
| BL1660_RS02465 () | 542285..543298 | - | 1014 | WP_193641162.1 | recombinase RecT | - |
| BL1660_RS02470 () | 543311..544300 | - | 990 | WP_100984975.1 | YqaJ viral recombinase family protein | - |
| BL1660_RS02475 () | 544281..544484 | - | 204 | WP_181895497.1 | hypothetical protein | - |
| BL1660_RS02480 () | 544685..544900 | - | 216 | WP_007051883.1 | hypothetical protein | - |
| BL1660_RS02485 () | 545219..545464 | - | 246 | WP_131220681.1 | hypothetical protein | - |
| BL1660_RS02490 () | 545646..545921 | - | 276 | WP_193641163.1 | hypothetical protein | - |
| BL1660_RS02495 () | 546008..546409 | + | 402 | WP_152596673.1 | hypothetical protein | - |
| BL1660_RS02500 () | 546409..546822 | + | 414 | WP_193641164.1 | ImmA/IrrE family metallo-endopeptidase | - |
| BL1660_RS02505 () | 546838..547080 | + | 243 | WP_131220680.1 | hypothetical protein | - |
| BL1660_RS02510 () | 547113..547781 | + | 669 | WP_131220679.1 | hypothetical protein | - |
| BL1660_RS02515 () | 548047..549207 | + | 1161 | WP_077384243.1 | IS256 family transposase ISBlo16 | Transposase |
| BL1660_RS02520 () | 549204..550364 | + | 1161 | WP_193641219.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| BL1660_RS02525 () | 550646..551749 | + | 1104 | WP_193641165.1 | macro domain-containing protein | - |
| BL1660_RS02530 () | 551893..552579 | + | 687 | WP_007052555.1 | VWA domain-containing protein | - |
| BL1660_RS02535 () | 552669..553157 | + | 489 | WP_008783436.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
| BL1660_RS02540 () | 553318..556437 | + | 3120 | WP_193641166.1 | alpha-mannosidase | - |
| BL1660_RS02545 () | 556568..559720 | + | 3153 | WP_058060978.1 | alpha-mannosidase | - |
| BL1660_RS02550 () | 560108..561400 | + | 1293 | WP_007054407.1 | sugar ABC transporter substrate-binding protein | - |
| BL1660_RS02555 () | 561397..562368 | + | 972 | WP_007054408.1 | sugar ABC transporter permease | - |
| BL1660_RS02560 () | 562368..563207 | + | 840 | WP_118088472.1 | carbohydrate ABC transporter permease | - |
| BL1660_RS02565 () | 563235..564515 | + | 1281 | WP_007057344.1 | hypothetical protein | - |
| BL1660_RS02570 () | 564674..566953 | + | 2280 | WP_193641167.1 | glycoside hydrolase family 3 C-terminal domain-containing protein | - |
| BL1660_RS02575 () | 567281..570571 | + | 3291 | WP_007054413.1 | hypothetical protein | VF |
| BL1660_RS02580 () | 570813..571922 | + | 1110 | WP_016462844.1 | LacI family transcriptional regulator | - |
| BL1660_RS02585 () | 572034..573269 | - | 1236 | WP_007057382.1 | AGE family epimerase/isomerase | - |
| BL1660_RS02590 () | 573336..574634 | - | 1299 | WP_007057383.1 | glycoside hydrolase family 125 protein | - |
| BL1660_RS02595 () | 574909..575211 | - | 303 | WP_007054417.1 | hypothetical protein | - |
| BL1660_RS02600 () | 575278..575388 | - | 111 | WP_007054418.1 | hypothetical protein | - |
| BL1660_RS02605 () | 575496..575885 | - | 390 | WP_007054419.1 | VOC family protein | - |
| BL1660_RS02610 () | 575962..576858 | - | 897 | WP_007054420.1 | carbohydrate kinase | - |
| BL1660_RS02615 () | 576931..578145 | - | 1215 | WP_007052560.1 | ROK family transcriptional regulator | - |
| BL1660_RS02620 () | 578372..579286 | + | 915 | WP_007055889.1 | ROK family protein | - |
| BL1660_RS02625 () | 579436..580560 | - | 1125 | WP_007054423.1 | ROK family transcriptional regulator | - |
| BL1660_RS02630 () | 580898..581710 | + | 813 | WP_007057381.1 | glucosamine-6-phosphate deaminase | - |
| BL1660_RS02635 () | 581766..583049 | + | 1284 | WP_012471799.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BL1660_RS02640 () | 583329..584963 | + | 1635 | WP_117701271.1 | ABC transporter substrate-binding protein | - |
| BL1660_RS02645 () | 585129..586220 | + | 1092 | WP_007052566.1 | ABC transporter permease | - |
| BL1660_RS02650 () | 586222..587391 | + | 1170 | WP_193641168.1 | ABC transporter permease | - |
| BL1660_RS02655 () | 587395..589104 | + | 1710 | WP_193641169.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL1660_RS02660 () | 589154..589675 | - | 522 | WP_007054427.1 | NUDIX domain-containing protein | - |
| BL1660_RS02665 () | 589724..591319 | - | 1596 | WP_010080884.1 | aminopeptidase P family protein | - |
| BL1660_RS02670 () | 591623..592474 | - | 852 | WP_049751097.1 | hypothetical protein | - |
| BL1660_RS02675 () | 593729..595351 | + | 1623 | WP_015713722.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BL1660_RS02680 () | 595412..599089 | + | 3678 | WP_193641170.1 | chromosome segregation protein SMC | - |
| BL1660_RS02685 () | 599208..600203 | - | 996 | WP_007052578.1 | GNAT family N-acetyltransferase | - |
| BL1660_RS02690 () | 600325..601878 | - | 1554 | WP_007054433.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| BL1660_RS02695 () | 602017..602805 | + | 789 | WP_007054434.1 | sigma-70 family RNA polymerase sigma factor | - |
| BL1660_RS02700 () | 602805..603125 | + | 321 | WP_007052582.1 | hypothetical protein | - |
| BL1660_RS02705 () | 603391..604335 | - | 945 | WP_007052584.1 | aldose 1-epimerase family protein | - |
| BL1660_RS02710 () | 604461..605417 | - | 957 | WP_007052585.1 | aldose 1-epimerase family protein | - |
| BL1660_RS02715 () | 605642..606700 | + | 1059 | WP_011068010.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BL1660_RS02720 () | 606740..607249 | - | 510 | WP_007054439.1 | Cys-tRNA(Pro) deacylase | - |
| BL1660_RS02725 () | 607344..608402 | - | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BL1660_RS02730 () | 608643..609368 | - | 726 | WP_007054441.1 | thiamine diphosphokinase | - |
| BL1660_RS02735 () | 609470..609685 | + | 216 | WP_131223952.1 | hypothetical protein | - |
| BL1660_RS02740 () | 609600..610604 | + | 1005 | WP_007054442.1 | fused MFS/spermidine synthase | - |
| BL1660_RS02745 () | 610889..611611 | + | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
| BL1660_RS02750 () | 611592..611786 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| BL1660_RS02755 () | 611839..612222 | + | 384 | WP_007052594.1 | 50S ribosomal protein L20 | - |
| BL1660_RS02760 () | 612292..613218 | + | 927 | WP_012471804.1 | Tyrosine recombinase XerD | VF |
| BL1660_RS02765 () | 613346..616192 | + | 2847 | WP_193641171.1 | putative ABC transporter ATP-binding protein YknY | VF |
| BL1660_RS02770 () | 616454..617293 | + | 840 | WP_007052597.1 | hypothetical protein | VF |
| BL1660_RS02775 () | 617312..618226 | + | 915 | WP_007052598.1 | segregation/condensation protein A | - |
| BL1660_RS02780 () | 618239..618955 | + | 717 | WP_007055260.1 | SMC-Scp complex subunit ScpB | - |
| BL1660_RS02785 () | 619087..619914 | + | 828 | WP_007054449.1 | NUDIX hydrolase | - |
| BL1660_RS02790 () | 619974..621254 | + | 1281 | WP_065453018.1 | quinolinate synthase NadA | - |
| BL1660_RS02795 () | 621346..622977 | + | 1632 | WP_007054450.1 | L-aspartate oxidase | - |
| BL1660_RS02800 () | 622981..623874 | + | 894 | WP_007052603.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BL1660_RS02805 () | 623877..625124 | + | 1248 | WP_007054451.1 | cysteine desulfurase | - |
| BL1660_RS02810 () | 625156..626505 | + | 1350 | WP_007052605.1 | MFS transporter | - |
| BL1660_RS02815 () | 626820..628751 | + | 1932 | WP_193641172.1 | GTP-binding protein TypA/BipA | VF |
| BL1660_RS02820 () | 628851..629297 | + | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| BL1660_RS02825 () | 629377..630354 | + | 978 | WP_008783121.1 | chorismate mutase | - |
| BL1660_RS02830 () | 630312..631415 | + | 1104 | WP_193641220.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BL1660_RS02835 () | 631627..631884 | + | 258 | WP_007052610.1 | hypothetical protein | - |
| BL1660_RS02840 () | 631919..632992 | + | 1074 | WP_007058617.1 | Tyrosine recombinase XerC | VF |
| BL1660_RS02845 () | 633244..634884 | + | 1641 | WP_007054457.1 | ABC transporter substrate-binding protein | - |
| BL1660_RS02850 () | 635185..636111 | + | 927 | WP_003832137.1 | ABC transporter permease | - |
| BL1660_RS02855 () | 636130..637134 | + | 1005 | WP_193641173.1 | ABC transporter permease | - |
| BL1660_RS02860 () | 637157..639166 | + | 2010 | WP_038426458.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL1660_RS02865 () | 639474..640334 | - | 861 | WP_007052617.1 | exodeoxyribonuclease III | - |
| BL1660_RS02870 () | 640459..641313 | + | 855 | WP_065443990.1 | DUF3710 domain-containing protein | - |
| BL1660_RS02875 () | 641329..642087 | + | 759 | WP_007054462.1 | DUF3159 domain-containing protein | - |
| BL1660_RS02880 () | 642077..643345 | + | 1269 | WP_007055251.1 | class I SAM-dependent RNA methyltransferase | - |
| BL1660_RS02885 () | 643357..644052 | + | 696 | WP_193641174.1 | hypothetical protein | - |
| BL1660_RS02890 () | 644143..646656 | + | 2514 | WP_193641175.1 | HAD-IC family P-type ATPase | - |
| BL1660_RS02895 () | 646777..649476 | + | 2700 | WP_010080853.1 | aconitate hydratase AcnA | - |
| BL1660_RS02900 () | 649621..650013 | + | 393 | WP_013410773.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL1660_RS02905 () | 650010..650501 | + | 492 | WP_007052625.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BL1660_RS02910 () | 650551..652656 | - | 2106 | WP_007052626.1 | DUF262 domain-containing protein | - |
| BL1660_RS02915 () | 652746..653387 | - | 642 | WP_193641176.1 | GNAT family N-acetyltransferase | - |
| BL1660_RS02920 () | 653427..654152 | - | 726 | WP_032738970.1 | response regulator transcription factor | - |
| BL1660_RS02925 () | 654187..655419 | - | 1233 | WP_193641221.1 | sensor histidine kinase | - |
| BL1660_RS02930 () | 655754..656599 | + | 846 | WP_007057205.1 | DUF5067 domain-containing protein | - |
| BL1660_RS02935 () | 656780..657679 | + | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BL1660_RS02940 () | 657819..658835 | + | 1017 | WP_013410776.1 | DMT family transporter | - |
| BL1660_RS02945 () | 658868..659608 | - | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
| BL1660_RS02950 () | 659740..661194 | + | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL1660_RS02955 () | 661205..662191 | + | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL1660_RS02960 () | 662225..662974 | - | 750 | WP_032684924.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BL1660_RS02965 () | 663186..666095 | + | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| BL1660_RS02970 () | 666272..666907 | + | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL1660_RS02975 () | 666919..667452 | + | 534 | WP_007052640.1 | CinA family protein | - |
| BL1660_RS02980 () | 667512..668027 | + | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BL1660_RS02985 () | 668139..668372 | + | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BL1660_RS02990 () | 668673..669866 | + | 1194 | WP_013140879.1 | recombinase RecA | - |
| BL1660_RS02995 () | 669869..670462 | + | 594 | WP_013140878.1 | RecX family transcriptional regulator | - |
| BL1660_RS03005 () | 671340..672002 | + | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BL1660_RS03010 () | 672164..675058 | + | 2895 | WP_007055154.1 | preprotein translocase subunit SecA | - |
| BL1660_RS03015 () | 675369..675722 | - | 354 | WP_065437220.1 | ISL3 family transposase ISTesp2 | Transposase |
| BL1660_RS03020 () | 676312..677358 | + | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
| BL1660_RS03025 () | 677599..678294 | - | 696 | WP_007058765.1 | hypothetical protein | - |
| BL1660_RS03030 () | 678355..679059 | + | 705 | WP_007058769.1 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| BL1660_RS03035 () | 679111..681384 | - | 2274 | WP_011068042.1 | Serine/threonine-protein kinase PK-1 | VF |
| BL1660_RS03040 () | 681528..682610 | - | 1083 | WP_007058720.1 | polyprenyl synthetase family protein | - |
| BL1660_RS03045 () | 682817..683479 | + | 663 | WP_007052659.1 | DUF4192 family protein | - |
| BL1660_RS03050 () | 683682..685106 | + | 1425 | WP_007055162.1 | RNA polymerase principal sigma factor HrdB | VF |
| BL1660_RS03055 () | 685164..687440 | + | 2277 | WP_053495563.1 | type IIA DNA topoisomerase subunit B | - |
| BL1660_RS03060 () | 687800..689026 | + | 1227 | WP_007052662.1 | MFS transporter | - |
| BL1660_RS03065 () | 689070..690062 | + | 993 | WP_007054492.1 | ribokinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|