MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 96153 bp
Accession: NZ_CP062947 Location: 728750..824902 Organism: Bifidobacterium longum subsp. longum strain KCTC 5914 Replicon: chromosome
Accession: NZ_CP062947 Location: 728750..824902 Organism: Bifidobacterium longum subsp. longum strain KCTC 5914 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL5914_RS03040 () | 724309..724995 | + | 687 | WP_007052555.1 | VWA domain-containing protein | - |
| BL5914_RS03045 () | 725085..725573 | + | 489 | WP_007052556.1 | D-tyrosyl-tRNA(Tyr) deacylase | - |
| BL5914_RS03050 () | 725670..726914 | - | 1245 | WP_007052557.1 | MFS transporter | - |
| BL5914_RS03055 () | 727020..727409 | - | 390 | WP_013582818.1 | VOC family protein | - |
| BL5914_RS03060 () | 727484..728380 | - | 897 | WP_007055890.1 | carbohydrate kinase | - |
| BL5914_RS03065 () | 728453..729667 | - | 1215 | WP_193029196.1 | ROK family transcriptional regulator | - |
| BL5914_RS03070 () | 729894..730808 | + | 915 | WP_007055889.1 | ROK family protein | - |
| BL5914_RS03075 () | 730958..732082 | - | 1125 | WP_007054423.1 | ROK family transcriptional regulator | - |
| BL5914_RS03080 () | 732420..733232 | + | 813 | WP_007052563.1 | glucosamine-6-phosphate deaminase | - |
| BL5914_RS03085 () | 733288..734571 | + | 1284 | WP_014485530.1 | N-acetylglucosamine-6-phosphate deacetylase | - |
| BL5914_RS03090 () | 734851..736485 | + | 1635 | WP_032684937.1 | ABC transporter substrate-binding protein | - |
| BL5914_RS03095 () | 736649..737740 | + | 1092 | WP_193029198.1 | ABC transporter permease | - |
| BL5914_RS03100 () | 737742..738911 | + | 1170 | WP_007052567.1 | ABC transporter permease | - |
| BL5914_RS03105 () | 738915..740624 | + | 1710 | WP_007052568.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL5914_RS03110 () | 740674..741195 | - | 522 | WP_007057255.1 | NUDIX domain-containing protein | - |
| BL5914_RS03115 () | 741244..742839 | - | 1596 | WP_193029200.1 | aminopeptidase P family protein | - |
| BL5914_RS03120 () | 743143..743994 | - | 852 | WP_007057256.1 | hypothetical protein | - |
| BL5914_RS03125 () | 745249..746832 | + | 1584 | WP_193020044.1 | bifunctional folylpolyglutamate synthase/dihydrofolate synthase | - |
| BL5914_RS03130 () | 746893..750570 | + | 3678 | WP_193020043.1 | chromosome segregation protein SMC | - |
| BL5914_RS03135 () | 750689..751684 | - | 996 | WP_007052578.1 | GNAT family N-acetyltransferase | - |
| BL5914_RS03140 () | 751806..753359 | - | 1554 | WP_032684935.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase | - |
| BL5914_RS03145 () | 753498..754286 | + | 789 | WP_007054434.1 | sigma-70 family RNA polymerase sigma factor | - |
| BL5914_RS03150 () | 754286..754606 | + | 321 | WP_007054435.1 | hypothetical protein | - |
| BL5914_RS03155 () | 754872..755816 | - | 945 | WP_007054436.1 | aldose 1-epimerase family protein | - |
| BL5914_RS03160 () | 755941..756897 | - | 957 | WP_060662243.1 | aldose 1-epimerase family protein | - |
| BL5914_RS03165 () | 757123..758181 | + | 1059 | WP_117772903.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| BL5914_RS03170 () | 758221..758730 | - | 510 | WP_007054439.1 | Cys-tRNA(Pro) deacylase | - |
| BL5914_RS03175 () | 758824..759882 | - | 1059 | WP_007052589.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| BL5914_RS03180 () | 760122..760847 | - | 726 | WP_007052590.1 | thiamine diphosphokinase | - |
| BL5914_RS03185 () | 760948..761163 | + | 216 | WP_161519595.1 | hypothetical protein | - |
| BL5914_RS03190 () | 761078..762082 | + | 1005 | WP_117772905.1 | fused MFS/spermidine synthase | - |
| BL5914_RS03195 () | 762367..763089 | + | 723 | WP_032682519.1 | translation initiation factor IF-3 | - |
| BL5914_RS03200 () | 763070..763264 | + | 195 | WP_007052593.1 | 50S ribosomal protein L35 | - |
| BL5914_RS03205 () | 763317..763700 | + | 384 | WP_007054446.1 | 50S ribosomal protein L20 | - |
| BL5914_RS03210 () | 763770..764696 | + | 927 | WP_131223953.1 | Tyrosine recombinase XerD | VF |
| BL5914_RS03215 () | 764824..767679 | + | 2856 | WP_193020042.1 | putative ABC transporter ATP-binding protein YknY | VF |
| BL5914_RS03220 () | 767941..768780 | + | 840 | WP_010080876.1 | hypothetical protein | VF |
| BL5914_RS03225 () | 768799..769713 | + | 915 | WP_007052598.1 | segregation/condensation protein A | - |
| BL5914_RS03230 () | 769726..770442 | + | 717 | WP_007055260.1 | SMC-Scp complex subunit ScpB | - |
| BL5914_RS03235 () | 770574..771401 | + | 828 | WP_007054449.1 | NUDIX hydrolase | - |
| BL5914_RS03240 () | 771461..772741 | + | 1281 | WP_007052601.1 | quinolinate synthase NadA | - |
| BL5914_RS03245 () | 772833..774464 | + | 1632 | WP_118214213.1 | L-aspartate oxidase | - |
| BL5914_RS03250 () | 774468..775361 | + | 894 | WP_007052603.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| BL5914_RS03255 () | 775364..776611 | + | 1248 | WP_007054451.1 | cysteine desulfurase | - |
| BL5914_RS03260 () | 776643..777992 | + | 1350 | WP_007052605.1 | MFS transporter | - |
| BL5914_RS03265 () | 778307..780237 | + | 1931 | Protein_629 | translational GTPase TypA | - |
| BL5914_RS03270 () | 780337..780783 | + | 447 | WP_007052607.1 | alcohol dehydrogenase | - |
| BL5914_RS03275 () | 780863..781840 | + | 978 | WP_008783121.1 | chorismate mutase | - |
| BL5914_RS03280 () | 781798..782901 | + | 1104 | WP_077321923.1 | prephenate dehydrogenase/arogenate dehydrogenase family protein | - |
| BL5914_RS03285 () | 783113..783370 | + | 258 | WP_007052610.1 | hypothetical protein | - |
| BL5914_RS03290 () | 783405..784478 | + | 1074 | WP_007058617.1 | Tyrosine recombinase XerC | VF |
| BL5914_RS03295 () | 784730..786370 | + | 1641 | WP_193020041.1 | ABC transporter substrate-binding protein | - |
| BL5914_RS03300 () | 786671..787597 | + | 927 | WP_007052614.1 | ABC transporter permease | - |
| BL5914_RS03305 () | 787616..788620 | + | 1005 | WP_065437214.1 | ABC transporter permease | - |
| BL5914_RS03310 () | 788643..790652 | + | 2010 | WP_193020039.1 | Glutathione import ATP-binding protein GsiA | VF |
| BL5914_RS03315 () | 790757..791617 | + | 861 | WP_007058594.1 | exodeoxyribonuclease III | - |
| BL5914_RS03320 () | 791685..792539 | + | 855 | WP_011068026.1 | DUF3710 domain-containing protein | - |
| BL5914_RS03325 () | 792555..793313 | + | 759 | WP_014485550.1 | DUF3159 domain-containing protein | - |
| BL5914_RS03330 () | 793303..794571 | + | 1269 | WP_193020277.1 | RsmD family RNA methyltransferase | - |
| BL5914_RS03335 () | 794583..795278 | + | 696 | WP_007055252.1 | hypothetical protein | - |
| BL5914_RS03340 () | 795369..797957 | + | 2589 | WP_100985104.1 | cation-translocating P-type ATPase | - |
| BL5914_RS03345 () | 798075..800774 | + | 2700 | WP_114555089.1 | aconitate hydratase AcnA | - |
| BL5914_RS03350 () | 800919..801311 | + | 393 | WP_013410773.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL5914_RS03355 () | 801308..801799 | + | 492 | WP_007052625.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| BL5914_RS03360 () | 801849..803954 | - | 2106 | WP_007052626.1 | DUF262 domain-containing protein | - |
| BL5914_RS03365 () | 804044..804685 | - | 642 | WP_007052627.1 | GNAT family N-acetyltransferase | - |
| BL5914_RS03370 () | 804725..805450 | - | 726 | WP_007056206.1 | Transcriptional regulatory protein LiaR | VF |
| BL5914_RS03375 () | 805485..806717 | - | 1233 | WP_007056207.1 | sensor histidine kinase | - |
| BL5914_RS03380 () | 807052..807897 | + | 846 | WP_007052630.1 | DUF5067 domain-containing protein | - |
| BL5914_RS03385 () | 808078..808977 | + | 900 | WP_007052631.1 | Bax inhibitor-1/YccA family protein | - |
| BL5914_RS03390 () | 809117..810133 | + | 1017 | WP_007052632.1 | DMT family transporter | - |
| BL5914_RS03395 () | 810166..810906 | - | 741 | WP_007056209.1 | GTP pyrophosphokinase YwaC | VF |
| BL5914_RS03400 () | 811038..812492 | + | 1455 | WP_007052635.1 | tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB | - |
| BL5914_RS03405 () | 812503..813489 | + | 987 | WP_007052636.1 | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA | - |
| BL5914_RS03410 () | 813523..814272 | - | 750 | WP_007056215.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BL5914_RS03415 () | 814495..817404 | + | 2910 | WP_007052638.1 | DNA translocase FtsK | - |
| BL5914_RS03420 () | 817581..818216 | + | 636 | WP_007052639.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| BL5914_RS03425 () | 818228..818761 | + | 534 | WP_007052640.1 | CinA family protein | - |
| BL5914_RS03430 () | 818821..819336 | + | 516 | WP_007052641.1 | helix-turn-helix transcriptional regulator | - |
| BL5914_RS03435 () | 819448..819681 | + | 234 | WP_007052642.1 | DUF3046 domain-containing protein | - |
| BL5914_RS03440 () | 819982..821175 | + | 1194 | WP_013140879.1 | recombinase RecA | - |
| BL5914_RS03445 () | 821178..821771 | + | 594 | WP_118294149.1 | RecX family transcriptional regulator | - |
| BL5914_RS03455 () | 822648..823310 | + | 663 | WP_007052648.1 | ribosome-associated translation inhibitor RaiA | - |
| BL5914_RS03460 () | 823472..826366 | + | 2895 | WP_007052649.1 | preprotein translocase subunit SecA | - |
| BL5914_RS03465 () | 826776..827913 | - | 1138 | Protein_668 | transposase | - |
| BL5914_RS03470 () | 828114..829160 | + | 1047 | WP_007055165.1 | anthranilate phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|