MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 90363 bp
Accession: NZ_CP062946 Location: 2593163..2683525 Organism: Thalassotalea sp. LPB0316 Replicon: chromosome
Accession: NZ_CP062946 Location: 2593163..2683525 Organism: Thalassotalea sp. LPB0316 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP316_RS11565 () | 2588386..2589276 | - | 891 | WP_193021315.1 | dienelactone hydrolase family protein | - |
| LP316_RS11570 () | 2589500..2589799 | - | 300 | WP_193021316.1 | PilZ domain-containing protein | - |
| LP316_RS11575 () | 2589895..2593785 | - | 3891 | WP_193021317.1 | ATP-dependent RNA helicase HrpA | - |
| LP316_RS11580 () | 2593905..2594324 | - | 420 | WP_193021318.1 | CBS domain-containing protein | - |
| LP316_RS11585 () | 2594740..2595774 | - | 1035 | WP_193021319.1 | isoaspartyl peptidase/L-asparaginase | - |
| LP316_RS11590 () | 2595878..2596390 | - | 513 | WP_193021320.1 | DUF3087 family protein | - |
| LP316_RS11595 () | 2596420..2598294 | - | 1875 | WP_193021321.1 | exodeoxyribonuclease V subunit alpha | - |
| LP316_RS11600 () | 2598287..2601796 | - | 3510 | WP_193021322.1 | exodeoxyribonuclease V subunit beta | - |
| LP316_RS11605 () | 2601796..2605137 | - | 3342 | WP_193021323.1 | exodeoxyribonuclease V subunit gamma | - |
| LP316_RS11610 () | 2605291..2605623 | - | 333 | WP_193021324.1 | hypothetical protein | - |
| LP316_RS11615 () | 2605744..2606409 | + | 666 | WP_193021325.1 | DUF2982 domain-containing protein | - |
| LP316_RS11620 () | 2606406..2607707 | - | 1302 | WP_193021326.1 | hypothetical protein | - |
| LP316_RS11625 () | 2607738..2608310 | - | 573 | WP_193021327.1 | tRNA-(ms[2]io[6]A)-hydroxylase | - |
| LP316_RS11630 () | 2608392..2609456 | - | 1065 | WP_193021328.1 | efflux RND transporter periplasmic adaptor subunit | - |
| LP316_RS11635 () | 2609466..2612837 | - | 3372 | WP_193021329.1 | efflux RND transporter permease subunit | - |
| LP316_RS11640 () | 2612840..2613154 | - | 315 | WP_193021330.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| LP316_RS11645 () | 2613288..2613479 | + | 192 | WP_193021331.1 | DUF2892 domain-containing protein | - |
| LP316_RS11650 () | 2613485..2613835 | + | 351 | WP_193021332.1 | rhodanese-like domain-containing protein | - |
| LP316_RS11655 () | 2613880..2614188 | - | 309 | WP_193021333.1 | DUF4282 domain-containing protein | - |
| LP316_RS11660 () | 2614286..2614948 | - | 663 | WP_193021334.1 | outer membrane beta-barrel protein | - |
| LP316_RS11665 () | 2615049..2616158 | - | 1110 | WP_193021335.1 | Outer membrane porin F | VF |
| LP316_RS11670 () | 2616312..2619092 | + | 2781 | WP_193021336.1 | insulinase family protein | - |
| LP316_RS11675 () | 2619139..2620155 | - | 1017 | WP_193021337.1 | Tyrosine recombinase XerD | VF |
| LP316_RS11680 () | 2620496..2620807 | + | 312 | WP_193021338.1 | hypothetical protein | - |
| LP316_RS11685 () | 2620913..2621227 | + | 315 | WP_193021339.1 | hypothetical protein | - |
| LP316_RS11690 () | 2621358..2621798 | + | 441 | WP_193021340.1 | energy transducer TonB | - |
| LP316_RS11695 () | 2621906..2622289 | + | 384 | WP_193021341.1 | hypothetical protein | - |
| LP316_RS11700 () | 2622423..2622725 | + | 303 | WP_193021342.1 | hypothetical protein | - |
| LP316_RS11705 () | 2622868..2623107 | + | 240 | WP_193021343.1 | zinc ribbon domain-containing protein | - |
| LP316_RS11710 () | 2623254..2623556 | + | 303 | WP_193021342.1 | hypothetical protein | - |
| LP316_RS11715 () | 2623662..2624045 | + | 384 | WP_193021341.1 | hypothetical protein | - |
| LP316_RS11720 () | 2624159..2624671 | + | 513 | WP_193021344.1 | hypothetical protein | - |
| LP316_RS11725 () | 2624791..2625000 | + | 210 | WP_193021345.1 | hypothetical protein | - |
| LP316_RS11730 () | 2625117..2625479 | + | 363 | WP_193021346.1 | hypothetical protein | - |
| LP316_RS11735 () | 2625596..2625814 | + | 219 | WP_193021347.1 | hypothetical protein | - |
| LP316_RS11740 () | 2625962..2626264 | + | 303 | WP_193021348.1 | hypothetical protein | - |
| LP316_RS11745 () | 2626383..2626712 | + | 330 | WP_193021349.1 | hypothetical protein | - |
| LP316_RS11750 () | 2626906..2627094 | + | 189 | WP_193021350.1 | hypothetical protein | - |
| LP316_RS11755 () | 2628189..2628476 | - | 288 | WP_193021351.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LP316_RS11760 () | 2628466..2628714 | - | 249 | WP_193021352.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| LP316_RS11765 () | 2628883..2629119 | + | 237 | WP_193021353.1 | hypothetical protein | - |
| LP316_RS11770 () | 2629248..2629664 | + | 417 | WP_193023891.1 | hypothetical protein | - |
| LP316_RS11775 () | 2629778..2630494 | + | 717 | WP_193021354.1 | subclass B1 metallo-beta-lactamase | - |
| LP316_RS11780 () | 2630676..2630927 | + | 252 | WP_193021355.1 | TIGR03643 family protein | - |
| LP316_RS11785 () | 2631065..2631472 | + | 408 | WP_193021356.1 | PH domain-containing protein | - |
| LP316_RS11790 () | 2631582..2632298 | + | 717 | WP_193021357.1 | CPBP family intramembrane metalloprotease | - |
| LP316_RS11795 () | 2632552..2633166 | + | 615 | WP_193021358.1 | hypothetical protein | - |
| LP316_RS11800 () | 2633340..2633711 | + | 372 | WP_193021359.1 | hypothetical protein | - |
| LP316_RS11805 () | 2633974..2634261 | + | 288 | WP_193021360.1 | hypothetical protein | - |
| LP316_RS11810 () | 2634392..2635228 | - | 837 | WP_193021361.1 | S-formylglutathione hydrolase | - |
| LP316_RS11815 () | 2635235..2636383 | - | 1149 | WP_193021362.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| LP316_RS11820 () | 2636597..2637604 | - | 1008 | WP_193021363.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| LP316_RS11825 () | 2637694..2642538 | - | 4845 | WP_193021364.1 | NAD-glutamate dehydrogenase | - |
| LP316_RS11830 () | 2642801..2645122 | - | 2322 | WP_193021365.1 | MMPL family transporter | - |
| LP316_RS11835 () | 2645127..2646134 | - | 1008 | WP_193021366.1 | hypothetical protein | - |
| LP316_RS11840 () | 2646208..2647572 | - | 1365 | WP_193021367.1 | DUF1329 domain-containing protein | - |
| LP316_RS11845 () | 2647583..2649631 | - | 2049 | WP_193021368.1 | DUF1302 domain-containing protein | - |
| LP316_RS11850 () | 2649955..2650176 | - | 222 | WP_193021369.1 | DUF2835 domain-containing protein | - |
| LP316_RS11855 () | 2650196..2652754 | - | 2559 | WP_193021370.1 | aminopeptidase N | - |
| LP316_RS11860 () | 2652859..2654310 | - | 1452 | WP_193021371.1 | Na+/H+ antiporter NhaC | - |
| LP316_RS11865 () | 2654798..2656831 | - | 2034 | WP_193021372.1 | carboxy terminal-processing peptidase | - |
| LP316_RS11870 () | 2656849..2657496 | - | 648 | WP_193021373.1 | RNA chaperone ProQ | - |
| LP316_RS11875 () | 2657516..2657803 | - | 288 | WP_193021374.1 | hypothetical protein | - |
| LP316_RS11880 () | 2657803..2658264 | - | 462 | WP_193021375.1 | GAF domain-containing protein | - |
| LP316_RS11885 () | 2658344..2659099 | - | 756 | WP_193021376.1 | SIMPL domain-containing protein | - |
| LP316_RS11890 () | 2659111..2659728 | - | 618 | WP_193021377.1 | DUF2057 domain-containing protein | - |
| LP316_RS11895 () | 2659853..2660461 | + | 609 | WP_193021378.1 | DNA-3-methyladenine glycosylase I | - |
| LP316_RS11900 () | 2660589..2661248 | + | 660 | WP_193021379.1 | Bax inhibitor-1/YccA family protein | - |
| LP316_RS11905 () | 2661316..2661687 | + | 372 | WP_193021380.1 | sulfurtransferase complex subunit TusD | - |
| LP316_RS11910 () | 2661693..2662052 | + | 360 | WP_193021381.1 | sulfurtransferase complex subunit TusC | - |
| LP316_RS11915 () | 2662062..2662346 | + | 285 | WP_193021382.1 | sulfurtransferase complex subunit TusB | - |
| LP316_RS11920 () | 2662343..2662672 | + | 330 | WP_193023892.1 | TusE/DsrC/DsvC family sulfur relay protein | - |
| LP316_RS11925 () | 2662682..2662885 | - | 204 | WP_193021383.1 | hypothetical protein | - |
| LP316_RS11930 () | 2663012..2664460 | - | 1449 | WP_193021384.1 | glyceraldehyde-3-phosphate dehydrogenase | - |
| LP316_RS11935 () | 2664627..2665427 | + | 801 | WP_193021385.1 | DUF2989 domain-containing protein | - |
| LP316_RS11940 () | 2665482..2665850 | - | 369 | WP_193021386.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| LP316_RS11945 () | 2665881..2667407 | - | 1527 | WP_193021387.1 | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | VF |
| LP316_RS11950 () | 2667704..2668699 | + | 996 | WP_193021388.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| LP316_RS11955 () | 2669088..2669543 | + | 456 | WP_193021389.1 | hypothetical protein | - |
| LP316_RS11960 () | 2669691..2672468 | - | 2778 | WP_193021390.1 | DUF349 domain-containing protein | - |
| LP316_RS11965 () | 2672465..2672740 | - | 276 | WP_193021391.1 | DUF1315 family protein | - |
| LP316_RS11970 () | 2672737..2673072 | - | 336 | WP_193021392.1 | hypothetical protein | - |
| LP316_RS11975 () | 2673155..2674636 | - | 1482 | WP_193021393.1 | alanine:cation symporter family protein | - |
| LP316_RS11980 () | 2674658..2675785 | - | 1128 | WP_193021394.1 | hypothetical protein | - |
| LP316_RS11985 () | 2675869..2676276 | - | 408 | WP_193023893.1 | TlpA family protein disulfide reductase | - |
| LP316_RS11990 () | 2676759..2678039 | - | 1281 | WP_193021395.1 | serine--tRNA ligase | - |
| LP316_RS11995 () | 2678057..2678458 | - | 402 | WP_193021396.1 | fluoride efflux transporter CrcB | - |
| LP316_RS12000 () | 2678439..2679794 | - | 1356 | WP_193021397.1 | replication-associated recombination protein A | - |
| LP316_RS12005 () | 2679778..2680437 | - | 660 | WP_193021398.1 | outer membrane lipoprotein chaperone LolA | - |
| LP316_RS12010 () | 2680457..2682952 | - | 2496 | WP_193021399.1 | DNA translocase FtsK | - |
| LP316_RS12015 () | 2683013..2683498 | - | 486 | WP_193021400.1 | leucine-responsive transcriptional regulator Lrp | - |
| LP316_RS12020 () | 2683622..2684743 | + | 1122 | WP_193021401.1 | alanine dehydrogenase | - |
| LP316_RS12025 () | 2684884..2685834 | + | 951 | WP_193021402.1 | thioredoxin-disulfide reductase | - |
| LP316_RS12030 () | 2685852..2686565 | + | 714 | WP_193021403.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
| LP316_RS12035 () | 2686562..2687263 | + | 702 | WP_193021404.1 | arginyltransferase | - |
| LP316_RS12040 () | 2687351..2687569 | + | 219 | WP_011043571.1 | translation initiation factor IF-1 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|