MGE detailed information
MGE type: Genomic_island MGE length: 35592 bp
Accession: NZ_CP062940 Location: 2450293..2485884 Organism: Bifidobacterium longum subsp. longum strain JCM 11343 Replicon: chromosome
Accession: NZ_CP062940 Location: 2450293..2485884 Organism: Bifidobacterium longum subsp. longum strain JCM 11343 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BL1343_RS10415 () | 2445467..2445886 | + | 420 | WP_007052224.1 | aspartate carbamoyltransferase regulatory subunit | - |
| BL1343_RS10420 () | 2445883..2447379 | + | 1497 | WP_007054219.1 | amidohydrolase family protein | - |
| BL1343_RS10425 () | 2447397..2448350 | + | 954 | WP_007052226.1 | orotidine-5'-phosphate decarboxylase | - |
| BL1343_RS10430 () | 2448486..2449310 | + | 825 | WP_007052227.1 | dihydroorotate dehydrogenase electron transfer subunit | - |
| BL1343_RS10435 () | 2449313..2450284 | + | 972 | WP_007052228.1 | dihydroorotate dehydrogenase | - |
| BL1343_RS10440 () | 2450293..2450988 | + | 696 | WP_007052229.1 | orotate phosphoribosyltransferase | - |
| BL1343_RS10445 () | 2451097..2451249 | + | 153 | WP_007054223.1 | hypothetical protein | - |
| BL1343_RS10450 () | 2451464..2452585 | + | 1122 | WP_061870141.1 | DUF2974 domain-containing protein | - |
| BL1343_RS10455 () | 2452740..2453663 | - | 924 | WP_007052232.1 | HTH-type transcriptional regulator CysB | VF |
| BL1343_RS10460 () | 2453765..2454394 | - | 630 | WP_007056272.1 | HAD family phosphatase | - |
| BL1343_RS10465 () | 2454496..2456259 | - | 1764 | WP_007052234.1 | bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase | - |
| BL1343_RS10470 () | 2456299..2457489 | - | 1191 | WP_007052235.1 | pyridoxal phosphate-dependent aminotransferase | - |
| BL1343_RS10475 () | 2457861..2458550 | - | 690 | WP_007056254.1 | virulence RhuM family protein | - |
| BL1343_RS10480 () | 2458606..2459562 | - | 957 | WP_007056248.1 | hypothetical protein | - |
| BL1343_RS10485 () | 2459883..2460311 | + | 429 | WP_007052245.1 | hypothetical protein | - |
| BL1343_RS10490 () | 2460389..2461039 | + | 651 | WP_007056268.1 | signal peptidase I | - |
| BL1343_RS10495 () | 2461537..2461875 | + | 339 | Protein_2025 | hypothetical protein | - |
| BL1343_RS10500 () | 2462036..2463610 | - | 1575 | WP_007056992.1 | amino acid permease | - |
| BL1343_RS10505 () | 2463930..2464562 | - | 633 | WP_007054235.1 | MFS transporter | - |
| BL1343_RS10510 () | 2464594..2464749 | - | 156 | WP_007056283.1 | hypothetical protein | - |
| BL1343_RS10515 () | 2464757..2464978 | + | 222 | WP_007054237.1 | YidC/Oxa1 family membrane protein insertase | - |
| BL1343_RS10520 () | 2464978..2465652 | + | 675 | WP_077322431.1 | YidC/Oxa1 family membrane protein insertase | - |
| BL1343_RS10525 () | 2465754..2466374 | + | 621 | WP_131269761.1 | NUDIX hydrolase | - |
| BL1343_RS10530 () | 2466403..2466726 | + | 324 | WP_074709766.1 | amidohydrolase | - |
| BL1343_RS10535 () | 2466890..2467351 | - | 462 | WP_019727563.1 | HipA N-terminal domain-containing protein | - |
| BL1343_RS10540 () | 2467375..2467668 | - | 294 | WP_012471870.1 | hypothetical protein | - |
| BL1343_RS10545 () | 2467761..2468402 | - | 642 | WP_007056262.1 | hypothetical protein | - |
| BL1343_RS10550 () | 2468616..2468795 | + | 180 | WP_007056286.1 | antitoxin VbhA family protein | - |
| BL1343_RS10555 () | 2468792..2469376 | + | 585 | WP_007056278.1 | putative adenosine monophosphate-protein transferase fic | VF |
| BL1343_RS10560 () | 2469579..2469863 | - | 285 | WP_007056282.1 | hypothetical protein | - |
| BL1343_RS10565 () | 2469880..2470215 | - | 336 | WP_007056255.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| BL1343_RS10570 () | 2470219..2470488 | - | 270 | WP_007056990.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BL1343_RS10575 () | 2470673..2471841 | - | 1169 | Protein_2041 | ABC transporter permease | - |
| BL1343_RS10580 () | 2471838..2472516 | - | 679 | Protein_2042 | ABC transporter ATP-binding protein | - |
| BL1343_RS10585 () | 2472513..2473401 | - | 889 | Protein_2043 | hypothetical protein | - |
| BL1343_RS10590 () | 2473398..2473912 | - | 515 | Protein_2044 | hypothetical protein | - |
| BL1343_RS10595 () | 2474038..2474733 | + | 696 | WP_003829410.1 | response regulator transcription factor | - |
| BL1343_RS10600 () | 2474799..2475868 | + | 1070 | Protein_2046 | histidine kinase | - |
| BL1343_RS10605 () | 2475837..2476340 | - | 504 | WP_193107976.1 | hypothetical protein | - |
| BL1343_RS10610 () | 2476808..2478060 | - | 1253 | Protein_2048 | IS256 family transposase | - |
| BL1343_RS10615 () | 2478759..2479017 | + | 259 | Protein_2049 | hypothetical protein | - |
| BL1343_RS10620 () | 2479171..2479972 | + | 802 | Protein_2050 | Abi family protein | - |
| BL1343_RS10625 () | 2480380..2480697 | + | 318 | Protein_2051 | hypothetical protein | - |
| BL1343_RS10630 () | 2481722..2482223 | - | 502 | Protein_2052 | GNAT family N-acetyltransferase | - |
| BL1343_RS10635 () | 2482409..2482859 | + | 451 | Protein_2053 | ASCH domain-containing protein | - |
| BL1343_RS10640 () | 2482965..2483539 | + | 575 | Protein_2054 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | - |
| BL1343_RS10645 () | 2483928..2484886 | + | 959 | Protein_2055 | VanZ family protein | - |
| BL1343_RS10650 () | 2485143..2485884 | - | 742 | Protein_2056 | hypothetical protein | - |
| BL1343_RS10655 () | 2486066..2486914 | + | 849 | Protein_2057 | deoxyribonuclease IV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|