MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 89847 bp
Accession: NZ_CP062890 Location: 1..89847 Organism: Escherichia coli O100:H21 strain Res13-Lact-ER07-18 Replicon: plasmid unnamed1009
Accession: NZ_CP062890 Location: 1..89847 Organism: Escherichia coli O100:H21 strain Res13-Lact-ER07-18 Replicon: plasmid unnamed1009
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP41_RS22190 () | 1..861 | + | 861 | WP_001076427.1 | replication protein RepA | - |
| IMP41_RS22195 () | 1261..2466 | + | 1206 | WP_000817632.1 | Plasmid partition protein A | VF |
| IMP41_RS22200 () | 2463..3428 | + | 966 | WP_000725192.1 | ParB/RepB/Spo0J family partition protein | - |
| IMP41_RS22205 () | 3695..5401 | + | 1707 | WP_009446764.1 | hypothetical protein | - |
| IMP41_RS22210 () | 5462..7051 | + | 1590 | WP_000085145.1 | hypothetical protein | - |
| IMP41_RS22215 () | 7061..7876 | + | 816 | WP_000041756.1 | hypothetical protein | - |
| IMP41_RS22220 () | 7912..8493 | + | 582 | WP_000035301.1 | hypothetical protein | - |
| IMP41_RS22225 () | 8505..9014 | + | 510 | WP_000509939.1 | hypothetical protein | - |
| IMP41_RS22230 () | 9131..9286 | - | 156 | WP_001313475.1 | type I toxin-antitoxin system toxin HokD | - |
| IMP41_RS22235 () | 9468..9713 | - | 246 | WP_001702262.1 | hypothetical protein | - |
| IMP41_RS22240 () | 9764..10609 | - | 846 | WP_023154394.1 | hypothetical protein | - |
| IMP41_RS22245 () | 10639..11439 | - | 801 | WP_001187871.1 | phage antirepressor KilAC domain-containing protein | - |
| IMP41_RS22250 () | 11604..12647 | - | 1044 | WP_000743162.1 | phage antirepressor Ant | - |
| IMP41_RS22255 () | 12644..12865 | - | 222 | WP_000245708.1 | host cell division inhibitor Icd-like protein | - |
| IMP41_RS22260 () | 13485..13997 | + | 513 | WP_000039791.1 | hypothetical protein | - |
| IMP41_RS22265 () | 14001..14540 | + | 540 | WP_001033469.1 | DUF5384 family protein | - |
| IMP41_RS22270 () | 14621..15187 | + | 567 | WP_000188920.1 | hypothetical protein | - |
| IMP41_RS22275 () | 15198..15809 | + | 612 | WP_000523980.1 | hypothetical protein | - |
| IMP41_RS22280 () | 15824..16705 | + | 882 | WP_195706926.1 | morphogenetic protein | - |
| IMP41_RS22285 () | 16787..20209 | + | 3423 | WP_042102742.1 | transglycosylase SLT domain-containing protein | - |
| IMP41_RS22290 () | 20209..20565 | + | 357 | WP_000002800.1 | hypothetical protein | - |
| IMP41_RS22295 () | 20562..21995 | + | 1434 | WP_000047920.1 | bleomycin hydrolase | - |
| IMP41_RS22300 () | 21995..22831 | + | 837 | WP_001189838.1 | hypothetical protein | - |
| IMP41_RS22305 () | 22910..23344 | + | 435 | WP_001286328.1 | hypothetical protein | - |
| IMP41_RS22310 () | 23356..26769 | + | 3414 | WP_195706927.1 | tail fiber protein | - |
| IMP41_RS22315 () | 26769..27293 | + | 525 | WP_024175644.1 | tail fiber assembly protein | - |
| IMP41_RS22320 () | 27328..27873 | - | 546 | WP_023356302.1 | tail assembly chaperone | - |
| IMP41_RS22325 () | 27892..28536 | - | 645 | WP_042102737.1 | hypothetical protein | - |
| IMP41_RS22330 () | 28617..29177 | - | 561 | WP_000905118.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IMP41_RS22335 () | 29305..29586 | + | 282 | WP_000332809.1 | hypothetical protein | - |
| IMP41_RS22340 () | 29654..29983 | + | 330 | WP_195706928.1 | holin | - |
| IMP41_RS22345 () | 29980..30423 | + | 444 | WP_000580776.1 | hypothetical protein | - |
| IMP41_RS22350 () | 30410..31012 | + | 603 | WP_000164724.1 | hypothetical protein | - |
| IMP41_RS22355 () | 31014..32933 | + | 1920 | WP_042102857.1 | phage protein DarA | - |
| IMP41_RS22360 () | 32930..33295 | + | 366 | WP_000175480.1 | hypothetical protein | - |
| IMP41_RS22365 () | 33308..36295 | + | 2988 | WP_023356275.1 | hypothetical protein | - |
| IMP41_RS22370 () | 36285..36593 | + | 309 | WP_023356276.1 | hypothetical protein | - |
| IMP41_RS22375 () | 36625..37719 | - | 1095 | WP_000610386.1 | hypothetical protein | - |
| IMP41_RS22380 () | 37712..38506 | - | 795 | WP_023356277.1 | hypothetical protein | - |
| IMP41_RS22385 () | 38704..39192 | - | 489 | WP_000068865.1 | single-stranded DNA-binding protein | - |
| IMP41_RS22390 () | 39362..39919 | + | 558 | WP_001345478.1 | lysozyme | - |
| IMP41_RS22395 () | 40211..41230 | - | 1020 | WP_000132938.1 | head processing protein | - |
| IMP41_RS22400 () | 41223..42932 | - | 1710 | WP_024200402.1 | hypothetical protein | - |
| IMP41_RS22405 () | 43008..49775 | + | 6768 | WP_089563718.1 | N-6 DNA methylase | - |
| IMP41_RS22410 () | 49809..50249 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| IMP41_RS22415 () | 50246..50494 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| IMP41_RS22420 () | 50577..51587 | + | 1011 | WP_032305419.1 | DUF2971 domain-containing protein | - |
| IMP41_RS22425 () | 51685..52437 | - | 753 | WP_072097039.1 | hypothetical protein | - |
| IMP41_RS22430 () | 52516..53076 | - | 561 | WP_023356281.1 | Ref family protein | - |
| IMP41_RS22435 () | 53322..53633 | - | 312 | WP_001224234.1 | hypothetical protein | - |
| IMP41_RS22440 () | 53684..54715 | - | 1032 | WP_029396411.1 | site-specific integrase | - |
| IMP41_RS22445 () | 54723..54944 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| IMP41_RS22450 () | 55549..55758 | + | 210 | WP_000874154.1 | hypothetical protein | - |
| IMP41_RS22455 () | 55869..56720 | + | 852 | WP_000611657.1 | hypothetical protein | - |
| IMP41_RS22460 () | 56746..58230 | - | 1485 | WP_000124150.1 | terminase | - |
| IMP41_RS22465 () | 58230..59423 | - | 1194 | WP_032153803.1 | hypothetical protein | - |
| IMP41_RS22470 () | 59509..59961 | - | 453 | WP_001326849.1 | late promoter-activating protein | - |
| IMP41_RS22475 () | 60050..61093 | - | 1044 | WP_032153800.1 | DUF968 domain-containing protein | - |
| IMP41_RS22480 () | 61121..61300 | - | 180 | WP_009446826.1 | hypothetical protein | - |
| IMP41_RS22485 () | 61305..61685 | - | 381 | WP_001216034.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| IMP41_RS22490 () | 61685..61906 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| IMP41_RS22495 () | 61979..62368 | - | 390 | WP_000506730.1 | DNA repair protein | - |
| IMP41_RS22500 () | 62543..63127 | + | 585 | WP_032272826.1 | hypothetical protein | - |
| IMP41_RS22505 () | 63305..64002 | - | 698 | Protein_63 | IS1 family transposase | - |
| IMP41_RS22510 () | 64207..64680 | - | 474 | WP_077632598.1 | hypothetical protein | - |
| IMP41_RS22515 () | 65839..66017 | - | 179 | Protein_65 | hypothetical protein | - |
| IMP41_RS22520 () | 66019..66705 | - | 687 | WP_072148508.1 | ead/Ea22-like family protein | - |
| IMP41_RS22525 () | 66693..67337 | - | 645 | WP_001065196.1 | hypothetical protein | - |
| IMP41_RS22530 () | 67330..67590 | - | 261 | WP_001471568.1 | hypothetical protein | - |
| IMP41_RS22535 () | 67583..68164 | - | 582 | WP_000675643.1 | hypothetical protein | - |
| IMP41_RS22540 () | 68359..68865 | - | 507 | WP_058820839.1 | 3'-phosphatase | - |
| IMP41_RS22545 () | 68938..70200 | - | 1263 | WP_000107682.1 | hypothetical protein | - |
| IMP41_RS22550 () | 70502..71203 | - | 702 | WP_000684845.1 | hypothetical protein | - |
| IMP41_RS22555 () | 71200..71877 | - | 678 | WP_001354545.1 | metallophosphoesterase | - |
| IMP41_RS22560 () | 71874..72500 | - | 627 | WP_000484107.1 | hypothetical protein | - |
| IMP41_RS22565 () | 72398..73060 | - | 663 | WP_032144601.1 | hypothetical protein | - |
| IMP41_RS22570 () | 73002..73157 | - | 156 | WP_000095380.1 | hypothetical protein | - |
| IMP41_RS22575 () | 73224..73802 | - | 579 | WP_029401427.1 | VRR-NUC domain-containing protein | - |
| IMP41_RS22580 () | 73805..74050 | - | 246 | WP_000840930.1 | hypothetical protein | - |
| IMP41_RS22585 () | 74197..74574 | + | 378 | WP_155061722.1 | hypothetical protein | - |
| IMP41_RS22590 () | 74584..75801 | + | 1218 | WP_155061723.1 | phage tail protein | - |
| IMP41_RS22595 () | 75805..76533 | + | 729 | WP_000896801.1 | hypothetical protein | - |
| IMP41_RS22600 () | 76520..77305 | + | 786 | WP_000602717.1 | hypothetical protein | - |
| IMP41_RS22605 () | 77307..78323 | + | 1017 | WP_000212025.1 | hypothetical protein | - |
| IMP41_RS22610 () | 78316..78948 | + | 633 | WP_000535208.1 | hypothetical protein | - |
| IMP41_RS22615 () | 78995..79993 | - | 999 | WP_155061724.1 | hypothetical protein | - |
| IMP41_RS22620 () | 79993..81357 | - | 1365 | WP_155061725.1 | replicative DNA helicase | - |
| IMP41_RS22630 () | 81829..81993 | - | 165 | WP_000146941.1 | DUF3927 family protein | - |
| IMP41_RS22635 () | 81993..82427 | - | 435 | WP_000467133.1 | tellurite resistance TerB family protein | - |
| IMP41_RS22655 () | 84052..86070 | - | 2019 | WP_187190012.1 | Dam family site-specific DNA-(adenine-N6)-methyltransferase | - |
| IMP41_RS22660 () | 86067..86972 | - | 906 | WP_000472529.1 | recombination-associated protein RdgC | - |
| IMP41_RS22665 () | 86965..87249 | - | 285 | WP_001177860.1 | hypothetical protein | - |
| IMP41_RS22670 () | 87712..88497 | + | 786 | WP_155061726.1 | hypothetical protein | - |
| IMP41_RS22675 () | 88537..88959 | + | 423 | WP_155061727.1 | ppfA | - |
| IMP41_RS22680 () | 89137..89529 | + | 393 | WP_001281125.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|