MGE detailed information
MGE type: Genomic_island MGE length: 25254 bp
Accession: NZ_CP062876 Location: 3625897..3651150 Organism: Escherichia coli O157:H16 strain Res13-Lact-PEA12-26 Replicon: chromosome
Accession: NZ_CP062876 Location: 3625897..3651150 Organism: Escherichia coli O157:H16 strain Res13-Lact-PEA12-26 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP69_RS17740 () | 3621154..3621851 | - | 698 | Protein_3451 | IS1 family transposase | - |
| IMP69_RS17745 () | 3621906..3622565 | - | 660 | Protein_3452 | fimbrial protein | - |
| IMP69_RS17750 () | 3622576..3625092 | - | 2517 | WP_001136485.1 | fimbrial biogenesis outer membrane usher protein | - |
| IMP69_RS17755 () | 3625122..3625817 | - | 696 | WP_000044774.1 | molecular chaperone | - |
| IMP69_RS17760 () | 3625897..3626481 | - | 585 | WP_001032614.1 | type 1 fimbrial protein | - |
| IMP69_RS17765 () | 3626882..3627637 | - | 756 | WP_001300536.1 | galactosamine-6-phosphate isomerase | - |
| IMP69_RS17770 () | 3627638..3628429 | - | 792 | WP_000534342.1 | PTS N-acetylgalactosamine transporter subunit IID | - |
| IMP69_RS17775 () | 3628419..3629222 | - | 804 | WP_000544489.1 | PTS N-acetylgalactosamine transporter subunit IIC | - |
| IMP69_RS17780 () | 3629261..3629737 | - | 477 | WP_000098022.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IMP69_RS17785 () | 3629904..3630764 | - | 861 | WP_195686498.1 | tagatose-bisphosphate aldolase subunit KbaY | - |
| IMP69_RS17790 () | 3630777..3631931 | - | 1155 | WP_001125708.1 | AgaS family sugar isomerase | - |
| IMP69_RS17795 () | 3632282..3633268 | - | 987 | Protein_3462 | N-acetylglucosamine-6-phosphate deacetylase | - |
| IMP69_RS17800 () | 3633289..3634260 | - | 972 | WP_000082157.1 | IS110 family transposase ISSm3 | Transposase |
| IMP69_RS17805 () | 3634436..3634585 | - | 150 | Protein_3464 | N-acetylglucosamine-6-phosphate deacetylase | - |
| IMP69_RS17810 () | 3634582..3635016 | - | 435 | WP_000948824.1 | PTS sugar transporter subunit IIA | - |
| IMP69_RS17815 () | 3635034..3635912 | - | 879 | WP_001300474.1 | PTS system mannose/fructose/sorbose family transporter subunit IID | - |
| IMP69_RS17820 () | 3635902..3636681 | - | 780 | WP_000406214.1 | PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC | - |
| IMP69_RS17825 () | 3636692..3637165 | - | 474 | WP_001295547.1 | PTS N-acetylgalactosamine transporter subunit IIB | - |
| IMP69_RS17830 () | 3637188..3638468 | - | 1281 | WP_000681920.1 | tagatose-bisphosphate aldolase subunit KbaZ | - |
| IMP69_RS17835 () | 3638717..3639526 | + | 810 | WP_000072187.1 | aga operon transcriptional regulator AgaR | - |
| IMP69_RS17840 () | 3639581..3640045 | - | 465 | WP_000347273.1 | type II toxin-antitoxin system ribonuclease toxin YhaV | Toxin Detail |
| IMP69_RS17845 () | 3640045..3640380 | - | 336 | WP_001307405.1 | type II toxin-antitoxin system antitoxin PrlF | Antitoxin Detail |
| IMP69_RS17850 () | 3640529..3642100 | - | 1572 | WP_001273753.1 | galactarate dehydratase | - |
| IMP69_RS17855 () | 3642475..3643809 | + | 1335 | WP_000599636.1 | galactarate/glucarate/glycerate transporter GarP | - |
| IMP69_RS17860 () | 3643825..3644595 | + | 771 | WP_001058211.1 | 2-dehydro-3-deoxyglucarate aldolase | - |
| IMP69_RS17865 () | 3644625..3645515 | + | 891 | WP_001303675.1 | 2-hydroxy-3-oxopropionate reductase | - |
| IMP69_RS17870 () | 3645612..3646757 | + | 1146 | WP_001300387.1 | glycerate 2-kinase | - |
| IMP69_RS17880 () | 3647759..3648862 | - | 1104 | WP_001488354.1 | YhaC family protein | - |
| IMP69_RS17885 () | 3648884..3649423 | - | 540 | WP_000675733.1 | hypothetical protein | - |
| IMP69_RS17890 () | 3649679..3650023 | - | 345 | WP_000145840.1 | transcriptional activator TdcR | - |
| IMP69_RS17895 () | 3650212..3651150 | + | 939 | WP_000104211.1 | transcriptional regulator TdcA | - |
| IMP69_RS17900 () | 3651249..3652238 | + | 990 | WP_000548347.1 | bifunctional threonine ammonia-lyase/L-serine ammonia-lyase TdcB | - |
| IMP69_RS17905 () | 3652260..3653591 | + | 1332 | WP_072664053.1 | threonine/serine transporter TdcC | - |
| IMP69_RS17910 () | 3653617..3654825 | + | 1209 | WP_001295545.1 | propionate kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|