MGE detailed information
MGE type: IS/Tn MGE length: 4492 bp
Accession: NZ_CP062867 Location: 135796..140287 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: plasmid unnamed972
Accession: NZ_CP062867 Location: 135796..140287 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: plasmid unnamed972
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP90_RS24195 () | 131099..131404 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| IMP90_RS24200 () | 131406..131624 | - | 219 | WP_000813630.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| IMP90_RS24205 () | 132252..132482 | + | 231 | WP_001261286.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| IMP90_RS24210 () | 132479..132895 | + | 417 | WP_001034044.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| IMP90_RS24215 () | 132970..134535 | + | 1566 | WP_001128474.1 | AAA family ATPase | - |
| IMP90_RS24220 () | 134520..135542 | + | 1023 | WP_000361402.1 | helicase UvrD | - |
| IMP90_RS24225 () | 135796..136482 | - | 687 | Protein_142 | IS1 family transposase | - |
| IMP90_RS24230 () | 136838..137752 | + | 915 | WP_000949005.1 | iron/manganese ABC transporter substrate-binding protein SitA | - |
| IMP90_RS24235 () | 137752..138579 | + | 828 | WP_000983710.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| IMP90_RS24240 () | 138576..139433 | + | 858 | WP_195706874.1 | metal ABC transporter permease | - |
| IMP90_RS24245 () | 139430..140287 | + | 858 | WP_000968139.1 | iron/manganese ABC transporter permease subunit SitD | - |
| IMP90_RS24250 () | 140521..140778 | - | 258 | Protein_147 | Tn3 family transposase | - |
| IMP90_RS24255 () | 140776..141189 | + | 414 | Protein_148 | phosphopyruvate hydratase | - |
| IMP90_RS24260 () | 141530..141910 | + | 381 | WP_001318207.1 | fluoride efflux transporter CrcB | - |
| IMP90_RS24265 () | 142290..143483 | - | 1194 | WP_000095526.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|