MGE detailed information
MGE type: Genomic_island MGE length: 9500 bp
Accession: NZ_CP062865 Location: 3206481..3215980 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: chromosome
Accession: NZ_CP062865 Location: 3206481..3215980 Organism: Escherichia coli O39:H21 strain Res13-Lact-PEB08-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP90_RS15405 () | 3202785..3204485 | + | 1701 | WP_000636129.1 | nitrate/nitrite two-component system sensor histidine kinase NarQ | - |
| IMP90_RS15410 () | 3204649..3205914 | + | 1266 | Protein_3006 | efflux RND transporter permease subunit | - |
| IMP90_RS15415 () | 3205963..3207332 | + | 1370 | WP_085947770.1 | IS3 family transposase IS150 | Transposase |
| IMP90_RS15420 () | 3207361..3209208 | + | 1848 | Protein_3008 | Multidrug efflux pump subunit AcrB | VF |
| IMP90_RS15425 () | 3209307..3209366 | - | 60 | WP_001386977.1 | protein YpfM | - |
| IMP90_RS15430 () | 3209747..3210103 | + | 357 | WP_000258247.1 | ArsC family reductase | - |
| IMP90_RS15435 () | 3210107..3211234 | + | 1128 | WP_001277809.1 | succinyl-diaminopimelate desuccinylase | - |
| IMP90_RS15440 () | 3211262..3211462 | + | 201 | WP_000383836.1 | YpfN family protein | - |
| IMP90_RS15445 () | 3211543..3212241 | - | 699 | WP_000679812.1 | esterase | - |
| IMP90_RS15450 () | 3212315..3214330 | - | 2016 | WP_000829292.1 | tRNA cytosine(34) acetyltransferase TmcA | - |
| IMP90_RS15455 () | 3214345..3215208 | - | 864 | WP_001267498.1 | neutral zinc metallopeptidase | - |
| IMP90_RS15460 () | 3215355..3215753 | - | 399 | WP_000911330.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| IMP90_RS15465 () | 3215753..3215980 | - | 228 | WP_000450524.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| IMP90_RS15470 () | 3216134..3216847 | - | 714 | WP_001295467.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| IMP90_RS15475 () | 3217060..3218094 | - | 1035 | WP_001330579.1 | outer membrane protein assembly factor BamC | - |
| IMP90_RS15480 () | 3218111..3218989 | - | 879 | WP_001295469.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| IMP90_RS15485 () | 3219135..3219707 | + | 573 | WP_000176187.1 | glycine cleavage system transcriptional repressor | - |
| IMP90_RS15490 () | 3219707..3220177 | + | 471 | WP_001068682.1 | thioredoxin-dependent thiol peroxidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|