MGE detailed information
MGE type: Prophage MGE length: 55925 bp
Accession: NZ_CP062863 Location: 3628385..3684309 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: chromosome
Accession: NZ_CP062863 Location: 3628385..3684309 Organism: Escherichia coli strain Res13-Lact-PEB14-36 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMP96_RS18575 () | 3623528..3624484 | + | 957 | WP_000121346.1 | molybdenum cofactor insertion chaperone PaoD | - |
| IMP96_RS18580 () | 3624535..3624873 | + | 339 | Protein_3399 | LysR family transcriptional regulator | - |
| IMP96_RS18585 () | 3625439..3626578 | + | 1140 | WP_063114697.1 | hypothetical protein | - |
| IMP96_RS18590 () | 3627136..3628350 | + | 1215 | WP_074442885.1 | type II restriction endonuclease | - |
| IMP96_RS18595 () | 3628385..3629788 | - | 1404 | WP_074442886.1 | DNA cytosine methyltransferase | - |
| IMP96_RS18600 () | 3629851..3630548 | - | 698 | Protein_3403 | IS1 family transposase IS1R | Transposase |
| IMP96_RS18605 () | 3630999..3631772 | + | 774 | WP_000355484.1 | hypothetical protein | - |
| IMP96_RS18610 () | 3631833..3632387 | - | 555 | WP_059329021.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IMP96_RS18615 () | 3632417..3632923 | + | 507 | WP_032248463.1 | hypothetical protein | - |
| IMP96_RS18620 () | 3632926..3633336 | + | 411 | WP_186195351.1 | tail fiber assembly protein | - |
| IMP96_RS18625 () | 3633317..3633550 | - | 234 | WP_001340317.1 | hypothetical protein | - |
| IMP96_RS18630 () | 3633967..3634278 | - | 312 | Protein_3409 | hypothetical protein | - |
| IMP96_RS18635 () | 3634282..3634866 | - | 585 | WP_000383548.1 | YmfQ family protein | - |
| IMP96_RS18640 () | 3634857..3635915 | - | 1059 | WP_032162450.1 | baseplate J/gp47 family protein | - |
| IMP96_RS18645 () | 3635902..3636327 | - | 426 | WP_143363363.1 | phage GP46 family protein | - |
| IMP96_RS18650 () | 3636327..3636875 | - | 549 | WP_001259087.1 | phage baseplate assembly protein V | - |
| IMP96_RS18655 () | 3636875..3637954 | - | 1080 | WP_195714437.1 | baseplate protein | - |
| IMP96_RS18660 () | 3637951..3639279 | - | 1329 | WP_195714438.1 | DNA circularization N-terminal domain-containing protein | - |
| IMP96_RS18665 () | 3639341..3639871 | - | 531 | WP_059329019.1 | hypothetical protein | - |
| IMP96_RS18670 () | 3639963..3641795 | - | 1833 | WP_059279596.1 | phage tail tape measure protein | - |
| IMP96_RS18675 () | 3641937..3642206 | - | 270 | WP_000661050.1 | phage tail assembly protein | - |
| IMP96_RS18680 () | 3642206..3642562 | - | 357 | WP_000090997.1 | phage tail tube protein | - |
| IMP96_RS18685 () | 3642562..3644058 | - | 1497 | WP_195714439.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| IMP96_RS18690 () | 3644042..3644212 | - | 171 | WP_000497753.1 | DUF2635 domain-containing protein | - |
| IMP96_RS18695 () | 3644221..3644781 | - | 561 | WP_000779292.1 | hypothetical protein | - |
| IMP96_RS18700 () | 3644778..3645284 | - | 507 | WP_000224835.1 | hypothetical protein | - |
| IMP96_RS18705 () | 3645259..3645669 | - | 411 | WP_000702401.1 | phage head closure protein | - |
| IMP96_RS18710 () | 3645666..3645989 | - | 324 | WP_000927711.1 | head-tail connector protein | - |
| IMP96_RS18715 () | 3645992..3646192 | - | 201 | WP_000601360.1 | hypothetical protein | - |
| IMP96_RS18720 () | 3646242..3647447 | - | 1206 | WP_000257491.1 | phage major capsid protein | - |
| IMP96_RS18725 () | 3647462..3648112 | - | 651 | WP_005104861.1 | HK97 family phage prohead protease | - |
| IMP96_RS18730 () | 3648090..3649331 | - | 1242 | WP_038431929.1 | phage portal protein | - |
| IMP96_RS18735 () | 3649331..3649513 | - | 183 | WP_000605604.1 | hypothetical protein | - |
| IMP96_RS18740 () | 3649525..3651021 | - | 1497 | WP_195714528.1 | terminase large subunit | - |
| IMP96_RS18745 () | 3651255..3651749 | - | 495 | WP_000929175.1 | phage terminase small subunit P27 family | - |
| IMP96_RS18750 () | 3651875..3652225 | - | 351 | WP_040091767.1 | HNH endonuclease | - |
| IMP96_RS18755 () | 3652353..3652727 | + | 375 | WP_040091768.1 | hypothetical protein | - |
| IMP96_RS18760 () | 3652939..3653331 | - | 393 | WP_040091769.1 | DUF2570 domain-containing protein | - |
| IMP96_RS18765 () | 3653315..3653791 | - | 477 | WP_040091770.1 | glycoside hydrolase family protein | - |
| IMP96_RS18770 () | 3653795..3654121 | - | 327 | WP_021570655.1 | phage holin, lambda family | - |
| IMP96_RS18775 () | 3654387..3655403 | + | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| IMP96_RS18780 () | 3655596..3656417 | + | 822 | WP_040091771.1 | hypothetical protein | - |
| IMP96_RS18785 () | 3656442..3656924 | + | 483 | WP_016236631.1 | hypothetical protein | - |
| IMP96_RS18790 () | 3656953..3657300 | - | 348 | WP_016236630.1 | hypothetical protein | - |
| IMP96_RS18795 () | 3657318..3658307 | - | 990 | WP_016236629.1 | DUF968 domain-containing protein | - |
| IMP96_RS18800 () | 3658315..3659112 | - | 798 | WP_001061418.1 | KilA-N domain-containing protein | - |
| IMP96_RS18805 () | 3659132..3659521 | - | 390 | WP_000767135.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IMP96_RS18810 () | 3659518..3659844 | - | 327 | WP_001545197.1 | LexA repressor | - |
| IMP96_RS18815 () | 3659844..3660338 | - | 495 | WP_195714440.1 | PerC family transcriptional regulator | - |
| IMP96_RS18820 () | 3660335..3661153 | - | 819 | WP_000061492.1 | helix-turn-helix domain-containing protein | - |
| IMP96_RS18825 () | 3661150..3661386 | - | 237 | WP_000933948.1 | hypothetical protein | - |
| IMP96_RS18830 () | 3661379..3662215 | - | 837 | WP_001087355.1 | ash family protein | - |
| IMP96_RS18835 () | 3662212..3662769 | - | 558 | WP_000515869.1 | protein YmfL | - |
| IMP96_RS18840 () | 3662813..3663013 | - | 201 | WP_000649477.1 | helix-turn-helix domain-containing protein | - |
| IMP96_RS18845 () | 3663104..3663778 | + | 675 | WP_000848748.1 | LexA family transcriptional repressor | - |
| IMP96_RS18850 () | 3664013..3664219 | + | 207 | WP_000549626.1 | hypothetical protein | - |
| IMP96_RS18855 () | 3664191..3664625 | - | 435 | WP_000016389.1 | hypothetical protein | - |
| IMP96_RS18860 () | 3664769..3665079 | + | 311 | Protein_3455 | hypothetical protein | - |
| IMP96_RS18865 () | 3665094..3665456 | + | 363 | WP_000135682.1 | hypothetical protein | - |
| IMP96_RS18870 () | 3665522..3666346 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| IMP96_RS18875 () | 3666474..3667010 | + | 537 | WP_000008200.1 | 5'-deoxynucleotidase | - |
| IMP96_RS18880 () | 3667001..3667363 | + | 363 | WP_001242749.1 | phage protein | - |
| IMP96_RS18885 () | 3667363..3667668 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| IMP96_RS18890 () | 3667895..3669058 | + | 1164 | WP_000051887.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IMP96_RS18900 () | 3669263..3670516 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IMP96_RS18905 () | 3670528..3671631 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IMP96_RS18910 () | 3671919..3672974 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| IMP96_RS18915 () | 3673013..3673414 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| IMP96_RS18920 () | 3673472..3674716 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3674132..3674212 | - | 81 | NuclAT_11 | - | - |
| - () | 3674132..3674212 | - | 81 | NuclAT_11 | - | - |
| - () | 3674132..3674212 | - | 81 | NuclAT_11 | - | - |
| - () | 3674132..3674212 | - | 81 | NuclAT_11 | - | - |
| IMP96_RS18925 () | 3674808..3675266 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IMP96_RS18930 () | 3675527..3676984 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| IMP96_RS18935 () | 3677041..3677562 | - | 522 | Protein_3469 | peptide chain release factor H | - |
| IMP96_RS18940 () | 3677561..3677764 | - | 204 | Protein_3470 | RNA ligase RtcB family protein | - |
| IMP96_RS18945 () | 3678010..3678462 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| IMP96_RS18950 () | 3678472..3678870 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IMP96_RS18955 () | 3678873..3679166 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IMP96_RS18960 () | 3679218..3680273 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IMP96_RS18965 () | 3680344..3681129 | - | 786 | WP_000207564.1 | Chemotaxis protein LafU | VF |
| IMP96_RS18970 () | 3681101..3682639 | + | 1539 | Protein_3476 | Flagellar biosynthesis protein FlhA | VF |
| IMP96_RS18975 () | 3682863..3683360 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| IMP96_RS18980 () | 3683536..3684309 | - | 774 | WP_001355630.1 | Murein DD-endopeptidase MepH | VF |
| IMP96_RS18985 () | 3684495..3684755 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| IMP96_RS18990 () | 3684758..3685027 | + | 270 | Protein_3480 | type II toxin-antitoxin system YafQ family toxin | - |
| IMP96_RS18995 () | 3685183..3685923 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IMP96_RS19000 () | 3685894..3686661 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IMP96_RS19005 () | 3686867..3687445 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|