MGE detailed information
MGE type: Prophage MGE length: 39616 bp
Accession: NZ_CP062838 Location: 3627311..3666926 Organism: Escherichia coli strain Res13-Lact-PER02-33 Replicon: chromosome
Accession: NZ_CP062838 Location: 3627311..3666926 Organism: Escherichia coli strain Res13-Lact-PER02-33 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ20_RS17485 () | 3624319..3625524 | + | 1206 | Protein_3421 | fimbrial adhesin EcpD | - |
| IMQ20_RS17490 () | 3625556..3626572 | + | 1017 | WP_001322394.1 | IS5-like element IS5 family transposase | - |
| IMQ20_RS17495 () | 3626719..3627021 | + | 303 | Protein_3423 | hypothetical protein | - |
| IMQ20_RS17500 () | 3627311..3628539 | + | 1229 | WP_195686422.1 | IS3 family transposase IS2 | Transposase |
| IMQ20_RS17505 () | 3628591..3628869 | - | 279 | WP_021559295.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IMQ20_RS17510 () | 3629000..3629434 | + | 435 | WP_001309734.1 | IS66 family transposase ISEc43 | Transposase |
| IMQ20_RS17515 () | 3629431..3629781 | + | 351 | WP_000624688.1 | IS66 family transposase ISEc47 | Transposase |
| IMQ20_RS17520 () | 3629812..3631425 | + | 1614 | WP_000080172.1 | IS66 family transposase ISEc43 | Transposase |
| IMQ20_RS17525 () | 3631528..3631959 | + | 432 | WP_031609936.1 | hypothetical protein | - |
| IMQ20_RS17530 () | 3631962..3632372 | + | 411 | WP_001032316.1 | tail fiber assembly protein | - |
| IMQ20_RS17535 () | 3632353..3632586 | - | 234 | WP_001619155.1 | hypothetical protein | - |
| IMQ20_RS17540 () | 3633927..3635450 | - | 1524 | Protein_3432 | prophage tail fiber N-terminal domain-containing protein | - |
| IMQ20_RS17545 () | 3635515..3635760 | - | 246 | Protein_3433 | hypothetical protein | VF |
| IMQ20_RS17550 () | 3635778..3636275 | - | 498 | WP_001135251.1 | lysozyme RrrD | - |
| IMQ20_RS17555 () | 3636275..3636490 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| IMQ20_RS17560 () | 3636558..3637610 | - | 1053 | WP_039268279.1 | site-specific DNA-methyltransferase | - |
| IMQ20_RS17565 () | 3637760..3637954 | - | 195 | WP_001355891.1 | hypothetical protein | - |
| IMQ20_RS17570 () | 3638255..3641398 | + | 3144 | WP_195686475.1 | metallophosphoesterase | - |
| IMQ20_RS17575 () | 3641502..3641681 | - | 180 | WP_039268256.1 | hypothetical protein | - |
| IMQ20_RS17580 () | 3641913..3642257 | - | 345 | WP_039268254.1 | antitermination protein | - |
| IMQ20_RS17585 () | 3642275..3643264 | - | 990 | WP_039268252.1 | DUF968 domain-containing protein | - |
| IMQ20_RS17590 () | 3643272..3644069 | - | 798 | WP_088568769.1 | KilA-N domain-containing protein | - |
| IMQ20_RS17595 () | 3644089..3645339 | - | 1251 | WP_195686477.1 | Rha family transcriptional regulator | - |
| IMQ20_RS17600 () | 3645336..3645887 | - | 552 | WP_000515848.1 | hypothetical protein | - |
| IMQ20_RS17605 () | 3645880..3646140 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| IMQ20_RS17610 () | 3646238..3646930 | + | 693 | WP_001020632.1 | helix-turn-helix transcriptional regulator | - |
| IMQ20_RS17615 () | 3647633..3647995 | + | 363 | WP_000135680.1 | hypothetical protein | - |
| IMQ20_RS17620 () | 3648061..3648885 | + | 825 | WP_000081287.1 | DUF2303 family protein | - |
| IMQ20_RS17625 () | 3649013..3649549 | + | 537 | WP_000008185.1 | 5'-deoxynucleotidase | - |
| IMQ20_RS17630 () | 3649540..3649902 | + | 363 | WP_001242726.1 | phage protein | - |
| IMQ20_RS17635 () | 3649902..3650207 | + | 306 | WP_000206732.1 | hypothetical protein | - |
| IMQ20_RS17640 () | 3650434..3651597 | + | 1164 | WP_000051887.1 | hypothetical protein ; Integrase | Integrase |
| IMQ20_RS17650 () | 3651802..3653055 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IMQ20_RS17655 () | 3653067..3654170 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IMQ20_RS17660 () | 3654458..3655513 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| IMQ20_RS17665 () | 3655552..3655953 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| IMQ20_RS17670 () | 3656011..3657255 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3656671..3656751 | - | 81 | NuclAT_10 | - | - |
| - () | 3656671..3656751 | - | 81 | NuclAT_10 | - | - |
| - () | 3656671..3656751 | - | 81 | NuclAT_10 | - | - |
| - () | 3656671..3656751 | - | 81 | NuclAT_10 | - | - |
| IMQ20_RS17675 () | 3657347..3657805 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IMQ20_RS17680 () | 3658066..3659523 | + | 1458 | WP_001293002.1 | cytosol nonspecific dipeptidase | - |
| IMQ20_RS17685 () | 3659580..3660101 | - | 522 | Protein_3460 | peptide chain release factor H | - |
| IMQ20_RS17690 () | 3660100..3660303 | - | 204 | Protein_3461 | RNA ligase RtcB family protein | - |
| IMQ20_RS17695 () | 3660549..3660905 | - | 357 | WP_097491642.1 | GNAT family N-acetyltransferase | - |
| IMQ20_RS17700 () | 3660915..3661313 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IMQ20_RS17705 () | 3661316..3661609 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IMQ20_RS17710 () | 3661661..3662716 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| IMQ20_RS17715 () | 3662787..3663572 | - | 786 | WP_000207587.1 | hypothetical protein | VF |
| IMQ20_RS17720 () | 3663544..3665256 | + | 1713 | Protein_3467 | hypothetical protein | VF |
| IMQ20_RS17725 () | 3665480..3665977 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| IMQ20_RS17730 () | 3666153..3666926 | - | 774 | WP_001355630.1 | hypothetical protein | VF |
| IMQ20_RS17735 () | 3667112..3667372 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | - |
| IMQ20_RS17740 () | 3667375..3667644 | + | 270 | Protein_3471 | type II toxin-antitoxin system YafQ family toxin | - |
| IMQ20_RS17745 () | 3667800..3668540 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| IMQ20_RS17750 () | 3668511..3669278 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| IMQ20_RS17755 () | 3669484..3670062 | - | 579 | WP_000284050.1 | D-sedoheptulose 7-phosphate isomerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|