MGE detailed information
MGE type: Prophage MGE length: 47132 bp
Accession: NZ_CP062838 Location: 2277509..2324640 Organism: Escherichia coli strain Res13-Lact-PER02-33 Replicon: chromosome
Accession: NZ_CP062838 Location: 2277509..2324640 Organism: Escherichia coli strain Res13-Lact-PER02-33 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ20_RS10960 () | 2273600..2273965 | + | 366 | WP_000276149.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| IMQ20_RS10965 () | 2273952..2274281 | + | 330 | WP_000046661.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| IMQ20_RS10970 () | 2274320..2275141 | - | 822 | WP_001260849.1 | serine protease | - |
| IMQ20_RS10975 () | 2275241..2275324 | - | 84 | WP_000233090.1 | hypothetical protein | - |
| IMQ20_RS10980 () | 2275417..2275752 | - | 336 | WP_000743952.1 | acid resistance repetitive basic protein Asr | - |
| IMQ20_RS10985 () | 2276149..2277402 | - | 1254 | WP_000091840.1 | MFS transporter | - |
| IMQ20_RS10990 () | 2277509..2278402 | + | 894 | WP_001019525.1 | hypothetical protein | VF |
| IMQ20_RS10995 () | 2278537..2279757 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| IMQ20_RS11000 () | 2279882..2280577 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| IMQ20_RS11005 () | 2280530..2281822 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| IMQ20_RS11010 () | 2281981..2282595 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| IMQ20_RS11015 () | 2282638..2283492 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit | - |
| IMQ20_RS11020 () | 2283494..2284111 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| IMQ20_RS11025 () | 2284122..2286545 | - | 2424 | WP_097491532.1 | dimethyl sulfoxide reductase subunit A | - |
| IMQ20_RS11030 () | 2286606..2289032 | - | 2427 | WP_001619485.1 | dimethyl sulfoxide reductase subunit A | - |
| IMQ20_RS11035 () | 2289231..2289536 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| IMQ20_RS11040 () | 2289644..2290354 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| IMQ20_RS11045 () | 2290357..2290917 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IMQ20_RS11050 () | 2290952..2291293 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| IMQ20_RS11055 () | 2291428..2291754 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IMQ20_RS11060 () | 2291960..2293174 | + | 1215 | WP_001619484.1 | starvation-sensing protein RspA | - |
| IMQ20_RS11065 () | 2293186..2294205 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IMQ20_RS11070 () | 2294263..2294391 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| IMQ20_RS11075 () | 2294393..2295673 | - | 1281 | WP_130082460.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IMQ20_RS11080 () | 2295708..2295959 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IMQ20_RS11085 () | 2296032..2298503 | - | 2472 | WP_021511903.1 | exonuclease | - |
| IMQ20_RS11090 () | 2298597..2298788 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| IMQ20_RS11095 () | 2298785..2298907 | - | 123 | Protein_2168 | cell division inhibition protein DicB | - |
| IMQ20_RS11100 () | 2298972..2300134 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IMQ20_RS11105 () | 2300160..2300234 | - | 75 | Protein_2170 | cell division inhibition protein DicB | - |
| IMQ20_RS11110 () | 2300813..2301061 | + | 249 | Protein_2171 | hypothetical protein | - |
| IMQ20_RS11115 () | 2301102..2301524 | + | 423 | WP_032201175.1 | DUF977 family protein | - |
| IMQ20_RS11120 () | 2301521..2301877 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| IMQ20_RS11125 () | 2302488..2302775 | + | 288 | Protein_2174 | hypothetical protein | - |
| IMQ20_RS11130 () | 2303544..2304885 | + | 1342 | Protein_2175 | ISNCY family transposase ISCARN112 | Transposase |
| IMQ20_RS11135 () | 2305322..2305654 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| IMQ20_RS11140 () | 2305857..2306162 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IMQ20_RS11145 () | 2306187..2306426 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IMQ20_RS11150 () | 2306426..2306713 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IMQ20_RS11155 () | 2306785..2306940 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IMQ20_RS11160 () | 2307157..2307408 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IMQ20_RS11165 () | 2307475..2307753 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IMQ20_RS11170 () | 2307755..2308804 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IMQ20_RS11175 () | 2308818..2309570 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IMQ20_RS11180 () | 2309848..2309937 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IMQ20_RS11185 () | 2309992..2310204 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IMQ20_RS11190 () | 2310474..2311490 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMQ20_RS11195 () | 2311704..2311919 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IMQ20_RS11200 () | 2312673..2312888 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IMQ20_RS11205 () | 2312893..2313204 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| IMQ20_RS11210 () | 2313201..2313734 | + | 534 | WP_001092971.1 | lysozyme | - |
| IMQ20_RS11215 () | 2313731..2314228 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IMQ20_RS11220 () | 2314592..2314804 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IMQ20_RS11225 () | 2314815..2315003 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IMQ20_RS11230 () | 2315006..2315071 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| IMQ20_RS11235 () | 2315151..2315306 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IMQ20_RS11240 () | 2315478..2315651 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IMQ20_RS11245 () | 2315803..2316213 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IMQ20_RS11250 () | 2316271..2316504 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IMQ20_RS11255 () | 2316893..2317057 | + | 165 | WP_165369921.1 | hypothetical protein | - |
| IMQ20_RS11260 () | 2317054..2317260 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IMQ20_RS11265 () | 2317257..2317886 | + | 630 | Protein_2202 | phage portal protein | - |
| IMQ20_RS11270 () | 2317886..2319049 | + | 1164 | Protein_2203 | DUF1983 domain-containing protein | - |
| IMQ20_RS11275 () | 2319117..2319284 | + | 168 | Protein_2204 | Ail/Lom family outer membrane beta-barrel protein | - |
| IMQ20_RS11280 () | 2319286..2320758 | + | 1473 | Protein_2205 | tail fiber protein | - |
| IMQ20_RS11285 () | 2320758..2321333 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| IMQ20_RS11290 () | 2321431..2322021 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IMQ20_RS11295 () | 2322338..2322571 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IMQ20_RS11300 () | 2322640..2322753 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IMQ20_RS11305 () | 2323357..2324640 | + | 1284 | Protein_2210 | MHS family MFS transporter YdfJ | - |
| IMQ20_RS11310 () | 2324729..2326189 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IMQ20_RS11315 () | 2326224..2326427 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IMQ20_RS11320 () | 2326604..2327290 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IMQ20_RS11325 () | 2327379..2328125 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|