MGE detailed information
MGE type: Prophage MGE length: 35410 bp
Accession: NZ_CP062826 Location: 2289219..2324628 Organism: Escherichia coli strain Res13-Lact-PER12-33-A Replicon: chromosome
Accession: NZ_CP062826 Location: 2289219..2324628 Organism: Escherichia coli strain Res13-Lact-PER12-33-A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ30_RS11025 () | 2286594..2289020 | - | 2427 | WP_001619485.1 | dimethyl sulfoxide reductase subunit A | - |
| IMQ30_RS11030 () | 2289219..2289524 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| IMQ30_RS11035 () | 2289632..2290342 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| IMQ30_RS11040 () | 2290345..2290905 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| IMQ30_RS11045 () | 2290940..2291281 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| IMQ30_RS11050 () | 2291416..2291742 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| IMQ30_RS11055 () | 2291948..2293162 | + | 1215 | WP_001619484.1 | starvation-sensing protein RspA | - |
| IMQ30_RS11060 () | 2293174..2294193 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| IMQ30_RS11065 () | 2294251..2294379 | + | 129 | WP_001389342.1 | hypothetical protein | - |
| IMQ30_RS11070 () | 2294381..2295661 | - | 1281 | WP_130082460.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IMQ30_RS11075 () | 2295696..2295947 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| IMQ30_RS11080 () | 2296020..2298491 | - | 2472 | WP_021511903.1 | exonuclease | - |
| IMQ30_RS11085 () | 2298585..2298776 | - | 192 | WP_001083280.1 | lysis protein YdfD | - |
| IMQ30_RS11090 () | 2298773..2298895 | - | 123 | Protein_2167 | cell division inhibition protein DicB | - |
| IMQ30_RS11095 () | 2298960..2300122 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| IMQ30_RS11100 () | 2300148..2300222 | - | 75 | Protein_2169 | cell division inhibition protein DicB | - |
| IMQ30_RS11105 () | 2300801..2301049 | + | 249 | Protein_2170 | hypothetical protein | - |
| IMQ30_RS11110 () | 2301090..2301512 | + | 423 | WP_032201175.1 | DUF977 family protein | - |
| IMQ30_RS11115 () | 2301509..2301865 | + | 357 | WP_001374839.1 | class I SAM-dependent methyltransferase | - |
| IMQ30_RS11120 () | 2302476..2302763 | + | 288 | Protein_2173 | hypothetical protein | - |
| IMQ30_RS11125 () | 2303532..2304873 | + | 1342 | Protein_2174 | ISNCY family transposase ISCARN112 | Transposase |
| IMQ30_RS11130 () | 2305310..2305642 | - | 333 | WP_001317460.1 | FlxA-like family protein | - |
| IMQ30_RS11135 () | 2305845..2306150 | - | 306 | WP_001326990.1 | hypothetical protein | - |
| IMQ30_RS11140 () | 2306175..2306414 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| IMQ30_RS11145 () | 2306414..2306701 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| IMQ30_RS11150 () | 2306773..2306928 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| IMQ30_RS11155 () | 2307145..2307396 | + | 252 | WP_000980994.1 | hypothetical protein | - |
| IMQ30_RS11160 () | 2307463..2307741 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| IMQ30_RS11165 () | 2307743..2308792 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| IMQ30_RS11170 () | 2308806..2309558 | + | 753 | WP_001047135.1 | antitermination protein | - |
| IMQ30_RS11175 () | 2309836..2309925 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| IMQ30_RS11180 () | 2309980..2310192 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| IMQ30_RS11185 () | 2310462..2311478 | + | 1017 | WP_001322394.1 | IS5 family transposase IS5D | Transposase |
| IMQ30_RS11190 () | 2311692..2311907 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| IMQ30_RS11195 () | 2312661..2312876 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| IMQ30_RS11200 () | 2312881..2313192 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| IMQ30_RS11205 () | 2313189..2313722 | + | 534 | WP_001092971.1 | lysozyme | - |
| IMQ30_RS11210 () | 2313719..2314216 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| IMQ30_RS11215 () | 2314580..2314792 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| IMQ30_RS11220 () | 2314803..2314991 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| IMQ30_RS11225 () | 2314994..2315059 | + | 66 | WP_122134696.1 | hypothetical protein | - |
| IMQ30_RS11230 () | 2315139..2315294 | + | 156 | WP_001309517.1 | hypothetical protein | - |
| IMQ30_RS11235 () | 2315466..2315639 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| IMQ30_RS11240 () | 2315791..2316201 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| IMQ30_RS11245 () | 2316259..2316492 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| IMQ30_RS11250 () | 2316881..2317045 | + | 165 | WP_165369921.1 | hypothetical protein | - |
| IMQ30_RS11255 () | 2317042..2317248 | + | 207 | WP_000198149.1 | gpW family protein | - |
| IMQ30_RS11260 () | 2317245..2317874 | + | 630 | Protein_2201 | phage portal protein | - |
| IMQ30_RS11265 () | 2317874..2319037 | + | 1164 | Protein_2202 | DUF1983 domain-containing protein | - |
| IMQ30_RS11270 () | 2319105..2319272 | + | 168 | Protein_2203 | Ail/Lom family outer membrane beta-barrel protein | - |
| IMQ30_RS11275 () | 2319274..2320746 | + | 1473 | Protein_2204 | tail fiber protein | - |
| IMQ30_RS11280 () | 2320746..2321321 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| IMQ30_RS11285 () | 2321419..2322009 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| IMQ30_RS11290 () | 2322326..2322559 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| IMQ30_RS11295 () | 2322628..2322741 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| IMQ30_RS11300 () | 2323345..2324628 | + | 1284 | Protein_2209 | MHS family MFS transporter YdfJ | - |
| IMQ30_RS11305 () | 2324717..2326177 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| IMQ30_RS11310 () | 2326212..2326415 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| IMQ30_RS11315 () | 2326592..2327278 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| IMQ30_RS11320 () | 2327367..2328113 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|