MGE detailed information
MGE type: Genomic_island MGE length: 84269 bp
Accession: NZ_CP062824 Location: 1955429..2039697 Organism: Escherichia coli O167:H26 strain Res13-Lact-PER13-34 Replicon: chromosome
Accession: NZ_CP062824 Location: 1955429..2039697 Organism: Escherichia coli O167:H26 strain Res13-Lact-PER13-34 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IMQ31_RS09390 () | 1950592..1951179 | + | 588 | WP_024230341.1 | transcriptional regulator BetI | - |
| IMQ31_RS09395 () | 1951193..1952665 | + | 1473 | WP_085458513.1 | betaine-aldehyde dehydrogenase | - |
| IMQ31_RS09400 () | 1952679..1954349 | + | 1671 | WP_085458512.1 | choline dehydrogenase | - |
| IMQ31_RS09405 () | 1955429..1955992 | + | 564 | WP_001295805.1 | Tyrosine recombinase XerD | VF |
| IMQ31_RS09410 () | 1956322..1957116 | + | 795 | WP_195714946.1 | helix-turn-helix transcriptional regulator | - |
| IMQ31_RS09415 () | 1957270..1958031 | + | 762 | WP_085458511.1 | protein HyxA | - |
| IMQ31_RS09420 () | 1958073..1959101 | + | 1029 | Protein_1846 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IMQ31_RS09425 () | 1959495..1960673 | + | 1179 | WP_139820599.1 | autotransporter outer membrane beta-barrel domain-containing protein | - |
| IMQ31_RS09430 () | 1960855..1961523 | + | 669 | WP_085458509.1 | hypothetical protein | - |
| IMQ31_RS09435 () | 1961766..1962461 | - | 696 | WP_000370406.1 | lactate utilization protein C | - |
| IMQ31_RS09440 () | 1962454..1963881 | - | 1428 | WP_000023924.1 | iron-sulfur cluster-binding protein | - |
| IMQ31_RS09445 () | 1963892..1964611 | - | 720 | WP_063085424.1 | (Fe-S)-binding protein | - |
| IMQ31_RS09450 () | 1965139..1965993 | - | 855 | WP_000339603.1 | DNA-binding transcriptional regulator RclR | - |
| IMQ31_RS09455 () | 1966220..1967545 | + | 1326 | WP_085458507.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| IMQ31_RS09460 () | 1967654..1967890 | + | 237 | WP_000474078.1 | DUF1471 domain-containing protein | - |
| IMQ31_RS09465 () | 1967902..1968495 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| IMQ31_RS09470 () | 1968657..1969526 | - | 870 | WP_001389971.1 | aldo/keto reductase | - |
| IMQ31_RS09475 () | 1969775..1970632 | + | 858 | WP_001389970.1 | Right origin-binding protein | VF |
| IMQ31_RS09480 () | 1970753..1975006 | - | 4254 | WP_085458506.1 | Invasin | VF |
| IMQ31_RS09485 () | 1975572..1976423 | + | 852 | WP_001174448.1 | aldo/keto reductase | - |
| IMQ31_RS09490 () | 1976450..1977439 | + | 990 | WP_085458505.1 | aldo/keto reductase | - |
| IMQ31_RS09495 () | 1977470..1978363 | - | 894 | WP_000910715.1 | HTH-type transcriptional regulator PgrR | VF |
| IMQ31_RS09500 () | 1978564..1979490 | - | 927 | WP_001307603.1 | HTH-type transcriptional regulator PgrR | VF |
| IMQ31_RS09505 () | 1979647..1980567 | + | 921 | WP_000860038.1 | alpha/beta hydrolase | - |
| IMQ31_RS09510 () | 1980812..1981958 | + | 1147 | Protein_1864 | NADH-dependent flavin oxidoreductase | - |
| IMQ31_RS09515 () | 1982432..1982533 | + | 102 | WP_000662256.1 | hypothetical protein | - |
| IMQ31_RS09520 () | 1982885..1983148 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| IMQ31_RS09525 () | 1983148..1983288 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| IMQ31_RS09530 () | 1983412..1983548 | - | 137 | Protein_1868 | hypothetical protein | - |
| IMQ31_RS09535 () | 1984372..1984914 | + | 543 | WP_001366466.1 | HTH-type transcriptional regulator EcpR | VF |
| IMQ31_RS09540 () | 1984989..1985576 | + | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| IMQ31_RS09545 () | 1985633..1986301 | + | 669 | WP_001577791.1 | putative fimbrial chaperone EcpB | VF |
| IMQ31_RS09550 () | 1986327..1988852 | + | 2526 | WP_001577790.1 | putative outer membrane usher protein EcpC | VF |
| IMQ31_RS09555 () | 1988842..1990485 | + | 1644 | WP_087890991.1 | Fimbria adhesin EcpD | VF |
| IMQ31_RS09560 () | 1990454..1991164 | + | 711 | WP_001577788.1 | putative fimbrial chaperone EcpE | VF |
| IMQ31_RS09565 () | 1991477..1991806 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| IMQ31_RS09570 () | 1992055..1992669 | - | 615 | WP_001019920.1 | YagU family protein | - |
| IMQ31_RS09575 () | 1993075..1993764 | + | 690 | WP_085458503.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| IMQ31_RS09580 () | 1993761..1994717 | + | 957 | WP_085458502.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| IMQ31_RS09585 () | 1994714..1996912 | + | 2199 | WP_085458501.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| IMQ31_RS09590 () | 1996922..1997878 | + | 957 | WP_085458500.1 | molybdenum cofactor insertion chaperone PaoD | - |
| IMQ31_RS09595 () | 1998058..1999185 | - | 1128 | WP_139820598.1 | MFS transporter | - |
| IMQ31_RS09600 () | 1999327..2000385 | - | 1059 | WP_122987197.1 | alpha/beta hydrolase | - |
| IMQ31_RS09605 () | 2000650..2001534 | + | 885 | WP_001119037.1 | HTH-type transcriptional regulator PgrR | VF |
| IMQ31_RS09610 () | 2002234..2002512 | - | 279 | WP_072648672.1 | hypothetical protein | - |
| IMQ31_RS09615 () | 2002680..2003231 | - | 552 | Protein_1885 | putative oxidoreductase | VF |
| IMQ31_RS09620 () | 2003244..2003402 | + | 159 | Protein_1886 | integrase | - |
| IMQ31_RS09625 () | 2003611..2003979 | - | 369 | WP_161398213.1 | TA system toxin CbtA family protein | Toxin Detail |
| IMQ31_RS09630 () | 2004000..2004356 | - | 357 | WP_024273779.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IMQ31_RS09635 () | 2004382..2004603 | - | 222 | WP_161398214.1 | DUF987 family protein | - |
| IMQ31_RS09640 () | 2004600..2005142 | - | 543 | WP_161398215.1 | DNA repair protein RadC | - |
| IMQ31_RS09645 () | 2005155..2005598 | - | 444 | WP_161398216.1 | antirestriction protein | - |
| IMQ31_RS09650 () | 2005629..2006450 | - | 822 | WP_161398217.1 | DUF945 domain-containing protein | - |
| IMQ31_RS09655 () | 2006571..2007035 | - | 465 | WP_161398218.1 | hypothetical protein | - |
| IMQ31_RS09660 () | 2007061..2007534 | - | 474 | WP_161398219.1 | hypothetical protein | - |
| IMQ31_RS09665 () | 2007555..2008244 | - | 690 | WP_161398220.1 | transcriptional regulator | - |
| IMQ31_RS09670 () | 2008459..2009334 | - | 876 | WP_195714947.1 | GTPase family protein | - |
| IMQ31_RS09675 () | 2009461..2010567 | - | 1107 | WP_161398144.1 | hypothetical protein | - |
| IMQ31_RS09680 () | 2011058..2011264 | + | 207 | WP_024273789.1 | AlpA family transcriptional regulator | - |
| IMQ31_RS09685 () | 2011359..2011955 | + | 597 | WP_161398145.1 | hypothetical protein | - |
| IMQ31_RS09690 () | 2012319..2012972 | + | 654 | WP_161398146.1 | inovirus Gp2 family protein | - |
| IMQ31_RS09695 () | 2013144..2013542 | + | 399 | WP_161398147.1 | hypothetical protein | - |
| IMQ31_RS09700 () | 2013717..2014040 | + | 324 | WP_004129363.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IMQ31_RS09705 () | 2014042..2014755 | + | 714 | WP_161398148.1 | arsenical resistance protein ArsH | - |
| IMQ31_RS09710 () | 2014764..2015309 | + | 546 | WP_161398149.1 | sigma-70 family RNA polymerase sigma factor | - |
| IMQ31_RS09715 () | 2015384..2015746 | + | 363 | WP_161398150.1 | arsenic metallochaperone ArsD family protein | - |
| IMQ31_RS09720 () | 2015773..2017524 | + | 1752 | WP_195714958.1 | Arsenical pump-driving ATPase | VF |
| IMQ31_RS09725 () | 2017649..2018185 | + | 537 | WP_048215599.1 | GNAT family N-acetyltransferase | - |
| IMQ31_RS09730 () | 2018220..2018645 | - | 426 | WP_063618738.1 | glutaredoxin-dependent arsenate reductase | - |
| IMQ31_RS09735 () | 2018658..2019947 | - | 1290 | WP_048279855.1 | arsenite efflux transporter membrane subunit ArsB | - |
| IMQ31_RS09740 () | 2019995..2021746 | - | 1752 | WP_161398118.1 | arsenite efflux transporter ATPase subunit ArsA | - |
| IMQ31_RS09745 () | 2021764..2022126 | - | 363 | WP_161398117.1 | arsenite efflux transporter metallochaperone ArsD | - |
| IMQ31_RS09750 () | 2022174..2022521 | - | 348 | WP_161398116.1 | As(III)-sensing metalloregulatory transcriptional repressor ArsR | - |
| IMQ31_RS09755 () | 2022868..2023953 | + | 1086 | WP_004129395.1 | nucleoid-associated protein | - |
| IMQ31_RS09760 () | 2023956..2025242 | + | 1287 | WP_161398115.1 | hypothetical protein | - |
| IMQ31_RS09765 () | 2025789..2026706 | + | 918 | WP_195714948.1 | hypothetical protein | - |
| IMQ31_RS09770 () | 2027192..2027602 | - | 411 | WP_004129411.1 | hypothetical protein | - |
| IMQ31_RS09775 () | 2027604..2028302 | - | 699 | WP_161398114.1 | HNH endonuclease | - |
| IMQ31_RS09780 () | 2028745..2029983 | - | 1239 | WP_161398113.1 | Prophage integrase IntS ; Integrase | Integrase |
| IMQ31_RS09790 () | 2030337..2031590 | - | 1254 | WP_195714949.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IMQ31_RS09795 () | 2031602..2032705 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IMQ31_RS09800 () | 2032993..2034048 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| IMQ31_RS09805 () | 2034087..2034488 | - | 402 | WP_000174684.1 | sigma factor-binding protein Crl | - |
| IMQ31_RS09810 () | 2034546..2035790 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 2035206..2035286 | - | 81 | NuclAT_10 | - | - |
| - () | 2035206..2035286 | - | 81 | NuclAT_10 | - | - |
| - () | 2035206..2035286 | - | 81 | NuclAT_10 | - | - |
| - () | 2035206..2035286 | - | 81 | NuclAT_10 | - | - |
| IMQ31_RS09815 () | 2035882..2036340 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| IMQ31_RS09820 () | 2036601..2038058 | + | 1458 | WP_001293010.1 | cytosol nonspecific dipeptidase | - |
| IMQ31_RS09825 () | 2038115..2038504 | - | 390 | Protein_1926 | peptide chain release factor H | - |
| IMQ31_RS09830 () | 2038541..2038993 | - | 453 | WP_059342012.1 | GNAT family N-acetyltransferase | - |
| IMQ31_RS09835 () | 2039003..2039401 | - | 399 | WP_025210215.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| IMQ31_RS09840 () | 2039404..2039697 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| IMQ31_RS09845 () | 2039749..2040804 | - | 1056 | WP_001226166.1 | DNA polymerase IV | - |
| IMQ31_RS09850 () | 2040875..2041660 | - | 786 | WP_000207556.1 | putative lateral flagellar export/assembly protein LafU | - |
| IMQ31_RS09855 () | 2041632..2043344 | + | 1713 | Protein_1932 | flagellar biosynthesis protein FlhA | - |
| IMQ31_RS09860 () | 2043449..2043727 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| IMQ31_RS09865 () | 2043720..2044076 | + | 357 | WP_001030484.1 | type II toxin-antitoxin system HicB family antitoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|