MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP062758 Location: 4807692..4828919 Organism: Escherichia coli O157:H7 strain Z892 Replicon: chromosome
Accession: NZ_CP062758 Location: 4807692..4828919 Organism: Escherichia coli O157:H7 strain Z892 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ38_RS24055 () | 4803418..4803960 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| ILQ38_RS24060 () | 4804253..4806403 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ILQ38_RS24065 () | 4806453..4806656 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ILQ38_RS24070 () | 4806667..4807623 | + | 957 | WP_001297640.1 | GTPase | - |
| ILQ38_RS24075 () | 4807692..4809050 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ILQ38_RS24080 () | 4809059..4809343 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| ILQ38_RS24085 () | 4809621..4812053 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| ILQ38_RS24090 () | 4812120..4813589 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ILQ38_RS24095 () | 4813589..4815343 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4815493..4815569 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4815493..4815569 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| ILQ38_RS24100 () | 4815564..4815905 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| ILQ38_RS24105 () | 4815952..4817115 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ILQ38_RS24110 () | 4817163..4818044 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ILQ38_RS24115 () | 4818141..4818305 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ILQ38_RS24120 () | 4818482..4819894 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ILQ38_RS24125 () | 4820137..4820337 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| ILQ38_RS24130 () | 4820342..4821094 | - | 753 | Protein_4722 | Rpn family recombination-promoting nuclease/putative transposase | - |
| ILQ38_RS24135 () | 4821561..4822793 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ILQ38_RS24140 () | 4822834..4824105 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ILQ38_RS24145 () | 4824221..4825372 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ILQ38_RS24150 () | 4825382..4826149 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| ILQ38_RS24155 () | 4826146..4826412 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ILQ38_RS24160 () | 4826724..4828919 | + | 2196 | WP_000535069.1 | T3SS effector pentapeptide repeat protein EspX6 | - |
| ILQ38_RS24165 () | 4829185..4830027 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| ILQ38_RS24170 () | 4830095..4831273 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |