MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP062755 Location: 4818587..4839814 Organism: Escherichia coli O157:H7 strain Z903 Replicon: chromosome
Accession: NZ_CP062755 Location: 4818587..4839814 Organism: Escherichia coli O157:H7 strain Z903 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ39_RS24110 () | 4814313..4814855 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| ILQ39_RS24115 () | 4815148..4817298 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ILQ39_RS24120 () | 4817348..4817551 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ILQ39_RS24125 () | 4817562..4818518 | + | 957 | WP_001297640.1 | GTPase | - |
| ILQ39_RS24130 () | 4818587..4819945 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ILQ39_RS24135 () | 4819954..4820238 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| ILQ39_RS24140 () | 4820516..4822948 | + | 2433 | WP_206391372.1 | DEAD/DEAH box helicase family protein | - |
| ILQ39_RS24145 () | 4823015..4824484 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ILQ39_RS24150 () | 4824484..4826238 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4826388..4826464 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4826388..4826464 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| ILQ39_RS24155 () | 4826459..4826800 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| ILQ39_RS24160 () | 4826847..4828010 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ILQ39_RS24165 () | 4828058..4828939 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ILQ39_RS24170 () | 4829036..4829200 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ILQ39_RS24175 () | 4829377..4830789 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ILQ39_RS24180 () | 4831032..4831232 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| ILQ39_RS24185 () | 4831237..4831989 | - | 753 | Protein_4733 | Recombination-promoting nuclease RpnD | VF |
| ILQ39_RS24190 () | 4832456..4833688 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ILQ39_RS24195 () | 4833729..4835000 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ILQ39_RS24200 () | 4835116..4836267 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ILQ39_RS24205 () | 4836277..4837044 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| ILQ39_RS24210 () | 4837041..4837307 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ILQ39_RS24215 () | 4837619..4839814 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| ILQ39_RS24220 () | 4840080..4840922 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| ILQ39_RS24225 () | 4840990..4842168 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |