MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP062725 Location: 4892334..4913561 Organism: Escherichia coli O157:H7 strain Z1813 Replicon: chromosome
Accession: NZ_CP062725 Location: 4892334..4913561 Organism: Escherichia coli O157:H7 strain Z1813 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ52_RS24650 () | 4888060..4888602 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| ILQ52_RS24655 () | 4888895..4891045 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ILQ52_RS24660 () | 4891095..4891298 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ILQ52_RS24665 () | 4891309..4892265 | + | 957 | WP_001297640.1 | GTPase | - |
| ILQ52_RS24670 () | 4892334..4893692 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ILQ52_RS24675 () | 4893701..4893985 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| ILQ52_RS24680 () | 4894263..4896695 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| ILQ52_RS24685 () | 4896762..4898231 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ILQ52_RS24690 () | 4898231..4899985 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4900135..4900211 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - () | 4900135..4900211 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| ILQ52_RS24695 () | 4900206..4900547 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| ILQ52_RS24700 () | 4900594..4901757 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ILQ52_RS24705 () | 4901805..4902686 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ILQ52_RS24710 () | 4902783..4902947 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ILQ52_RS24715 () | 4903124..4904536 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ILQ52_RS24720 () | 4904779..4904979 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| ILQ52_RS24725 () | 4904984..4905736 | - | 753 | Protein_4840 | hypothetical protein | VF |
| ILQ52_RS24730 () | 4906203..4907435 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ILQ52_RS24735 () | 4907476..4908747 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ILQ52_RS24740 () | 4908863..4910014 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ILQ52_RS24745 () | 4910024..4910791 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| ILQ52_RS24750 () | 4910788..4911054 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ILQ52_RS24755 () | 4911366..4913561 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| ILQ52_RS24760 () | 4913827..4914669 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| ILQ52_RS24765 () | 4914737..4915915 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |