MGE detailed information
MGE type: Genomic_island MGE length: 21234 bp
Accession: NZ_CP062713 Location: 4819955..4841188 Organism: Escherichia coli O157:H7 strain Z1830 Replicon: chromosome
Accession: NZ_CP062713 Location: 4819955..4841188 Organism: Escherichia coli O157:H7 strain Z1830 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ILQ58_RS24130 () | 4815681..4816223 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| ILQ58_RS24135 () | 4816516..4818666 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| ILQ58_RS24140 () | 4818716..4818919 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| ILQ58_RS24145 () | 4818930..4819886 | + | 957 | WP_001297640.1 | GTPase | - |
| ILQ58_RS24150 () | 4819955..4821313 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| ILQ58_RS24155 () | 4821322..4821606 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| ILQ58_RS24160 () | 4821884..4824316 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| ILQ58_RS24165 () | 4824383..4825852 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| ILQ58_RS24170 () | 4825852..4827606 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - () | 4827756..4827832 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_14 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - () | 4827756..4827832 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| ILQ58_RS24175 () | 4827827..4828168 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| ILQ58_RS24180 () | 4828215..4829378 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| ILQ58_RS24185 () | 4829426..4830307 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| ILQ58_RS24190 () | 4830404..4830568 | - | 165 | WP_000394274.1 | DUF1127 domain-containing protein | - |
| ILQ58_RS24195 () | 4830745..4832157 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| ILQ58_RS24200 () | 4832400..4832600 | - | 201 | WP_001310455.1 | hypothetical protein | - |
| ILQ58_RS24205 () | 4832605..4833357 | - | 753 | Protein_4737 | Recombination-promoting nuclease RpnD | VF |
| ILQ58_RS24210 () | 4833824..4835056 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| ILQ58_RS24215 () | 4835097..4836368 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| ILQ58_RS24220 () | 4836484..4837635 | + | 1152 | WP_001302931.1 | 2-hydroxyacyl-CoA dehydratase subunit D | - |
| ILQ58_RS24225 () | 4837645..4838412 | + | 768 | WP_000222489.1 | hypothetical protein | - |
| ILQ58_RS24230 () | 4838409..4838675 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| ILQ58_RS24235 () | 4838987..4841188 | + | 2202 | WP_000535071.1 | hypothetical protein | VF |
| ILQ58_RS24240 () | 4841454..4842296 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| ILQ58_RS24245 () | 4842364..4843542 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |