MGE detailed information
MGE type: Prophage MGE length: 66681 bp
Accession: NZ_CP062380 Location: 52..66732 Organism: Staphylococcus aureus strain NAS_AN_076 Replicon: chromosome
Accession: NZ_CP062380 Location: 52..66732 Organism: Staphylococcus aureus strain NAS_AN_076 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF704_RS00005 () | 1..1695 | + | 1695 | WP_000133304.1 | phage terminase family protein | - |
| IF704_RS00010 () | 1709..1909 | + | 201 | WP_000365300.1 | hypothetical protein | - |
| IF704_RS00015 () | 1915..3165 | + | 1251 | WP_000511067.1 | phage portal protein | - |
| IF704_RS00020 () | 3158..3742 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| IF704_RS00025 () | 3830..5077 | + | 1248 | WP_000849950.1 | phage major capsid protein | - |
| IF704_RS00030 () | 5113..5271 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| IF704_RS00035 () | 5280..5612 | + | 333 | WP_001177483.1 | head-tail connector protein | - |
| IF704_RS00040 () | 5599..5934 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| IF704_RS00045 () | 5934..6311 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| IF704_RS00050 () | 6308..6688 | + | 381 | WP_000611452.1 | hypothetical protein | - |
| IF704_RS00055 () | 6689..7642 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| IF704_RS00060 () | 7707..8153 | + | 447 | WP_000442602.1 | hypothetical protein | - |
| IF704_RS00065 () | 8213..8335 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| IF704_RS00070 () | 8391..13040 | + | 4650 | WP_042908137.1 | phage tail tape measure protein | - |
| IF704_RS00075 () | 13040..14530 | + | 1491 | WP_001154327.1 | phage tail family protein | - |
| IF704_RS00080 () | 14546..18331 | + | 3786 | WP_240022153.1 | phage tail spike protein | - |
| IF704_RS00085 () | 18321..18473 | + | 153 | WP_000654329.1 | hypothetical protein | - |
| IF704_RS00090 () | 18520..18807 | + | 288 | WP_001040255.1 | hypothetical protein | - |
| IF704_RS00095 () | 18863..19237 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| IF704_RS00100 () | 19380..19556 | + | 177 | WP_072357969.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - () | 19548..19687 | - | 140 | NuclAT_1 | - | - |
| - () | 19548..19687 | - | 140 | NuclAT_1 | - | - |
| - () | 19548..19687 | - | 140 | NuclAT_1 | - | - |
| - () | 19548..19687 | - | 140 | NuclAT_1 | - | - |
| IF704_RS00105 () | 19609..19716 | - | 108 | WP_031762631.1 | hypothetical protein | - |
| IF704_RS00110 () | 19768..20022 | + | 255 | WP_000611512.1 | phage holin | - |
| IF704_RS00115 () | 20034..20789 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| IF704_RS00120 () | 20980..21471 | + | 492 | WP_000920038.1 | Staphylokinase | VF |
| IF704_RS00125 () | 22122..22457 | + | 336 | Protein_24 | SH3 domain-containing protein | - |
| IF704_RS00130 () | 22968..23318 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| IF704_RS00135 () | 23370..23630 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| IF704_RS00140 () | 23941..24120 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| IF704_RS00145 () | 24578..25615 | - | 1038 | WP_000857175.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| IF704_RS00150 () | 25723..26337 | + | 615 | WP_015980400.1 | hypothetical protein | - |
| IF704_RS00155 () | 26334..26480 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| IF704_RS00160 () | 26516..26698 | - | 183 | WP_000705240.1 | hypothetical protein | - |
| IF704_RS00165 () | 26898..27083 | - | 186 | WP_024936996.1 | hypothetical protein | - |
| IF704_RS00170 () | 27080..27226 | - | 147 | WP_001049401.1 | hypothetical protein | - |
| IF704_RS00175 () | 27238..27960 | - | 723 | WP_024936995.1 | XRE family transcriptional regulator | - |
| IF704_RS00180 () | 28102..28320 | + | 219 | WP_001198673.1 | helix-turn-helix transcriptional regulator | - |
| IF704_RS00185 () | 28336..29127 | + | 792 | WP_001148563.1 | phage antirepressor KilAC domain-containing protein | - |
| IF704_RS00190 () | 29128..29352 | + | 225 | WP_000187184.1 | hypothetical protein | - |
| IF704_RS00195 () | 29392..29469 | + | 78 | Protein_38 | hypothetical protein | - |
| IF704_RS00200 () | 29484..29696 | - | 213 | WP_047213263.1 | hypothetical protein | - |
| IF704_RS00205 () | 29753..30502 | + | 750 | WP_047213634.1 | phage antirepressor KilAC domain-containing protein | - |
| IF704_RS00210 () | 30518..30712 | + | 195 | WP_001148853.1 | hypothetical protein | - |
| IF704_RS00215 () | 30707..31063 | - | 357 | WP_000768245.1 | DUF2513 domain-containing protein | - |
| IF704_RS00220 () | 31113..31304 | + | 192 | WP_000389906.1 | hypothetical protein | - |
| IF704_RS00225 () | 31306..31533 | - | 228 | WP_047213632.1 | hypothetical protein | - |
| IF704_RS00230 () | 31592..31912 | + | 321 | WP_001120935.1 | DUF771 domain-containing protein | - |
| IF704_RS00235 () | 31909..32070 | + | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| IF704_RS00240 () | 32163..32423 | + | 261 | WP_000291489.1 | hypothetical protein ; Integrase | Integrase |
| IF704_RS00245 () | 32432..32695 | + | 264 | WP_001205732.1 | hypothetical protein | - |
| IF704_RS00250 () | 32692..34647 | + | 1956 | WP_047213630.1 | AAA family ATPase | - |
| IF704_RS00255 () | 34649..35569 | + | 921 | WP_000138475.1 | recombinase RecT | - |
| IF704_RS00260 () | 35665..36267 | + | 603 | WP_076692545.1 | MBL fold metallo-hydrolase | - |
| IF704_RS00265 () | 36268..36738 | + | 471 | WP_240022151.1 | single-stranded DNA-binding protein | - |
| IF704_RS00270 () | 36768..37652 | + | 885 | WP_047213628.1 | DnaD domain protein | - |
| IF704_RS00275 () | 37659..37877 | + | 219 | WP_000338528.1 | hypothetical protein | - |
| IF704_RS00280 () | 37886..38290 | + | 405 | WP_001662398.1 | RusA family crossover junction endodeoxyribonuclease | - |
| IF704_RS00285 () | 38303..38671 | + | 369 | WP_047213626.1 | SA1788 family PVL leukocidin-associated protein | - |
| IF704_RS00290 () | 38675..38917 | + | 243 | WP_000131379.1 | phi PVL orf 51-like protein | - |
| IF704_RS00295 () | 38932..39334 | + | 403 | Protein_58 | hypothetical protein | - |
| IF704_RS00300 () | 39334..39609 | + | 276 | WP_047213622.1 | hypothetical protein | - |
| IF704_RS00305 () | 39602..39850 | + | 249 | WP_047213620.1 | DUF1024 family protein | - |
| IF704_RS00310 () | 39843..40380 | + | 538 | Protein_61 | dUTP diphosphatase | - |
| IF704_RS00315 () | 40417..40662 | + | 246 | WP_057520733.1 | hypothetical protein | - |
| IF704_RS00320 () | 40659..40865 | + | 207 | WP_058008160.1 | DUF1381 domain-containing protein | - |
| IF704_RS00325 () | 40862..41062 | + | 201 | WP_000573772.1 | hypothetical protein | - |
| IF704_RS00330 () | 41055..41204 | + | 150 | WP_000595240.1 | hypothetical protein | - |
| IF704_RS00335 () | 41204..41404 | + | 201 | WP_047213617.1 | DUF1514 family protein | - |
| IF704_RS00340 () | 41427..41888 | + | 462 | WP_000282745.1 | hypothetical protein | - |
| IF704_RS00345 () | 42003..42455 | + | 453 | WP_000406191.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| IF704_RS00350 () | 42471..42815 | + | 345 | WP_000817289.1 | HNH endonuclease | - |
| IF704_RS00355 () | 42945..43412 | + | 468 | WP_000919026.1 | phage terminase small subunit P27 family | - |
| IF704_RS00360 () | 43415..45109 | + | 1695 | WP_000133304.1 | phage terminase family protein | - |
| IF704_RS00365 () | 45123..45323 | + | 201 | WP_000365300.1 | hypothetical protein | - |
| IF704_RS00370 () | 45329..46579 | + | 1251 | WP_000511067.1 | phage portal protein | - |
| IF704_RS00375 () | 46572..47156 | + | 585 | WP_000032525.1 | HK97 family phage prohead protease | - |
| IF704_RS00380 () | 47244..48491 | + | 1248 | WP_000849950.1 | phage major capsid protein | - |
| IF704_RS00385 () | 48527..48685 | + | 159 | WP_001252099.1 | hypothetical protein | - |
| IF704_RS00390 () | 48694..49026 | + | 333 | WP_001177483.1 | head-tail connector protein | - |
| IF704_RS00395 () | 49013..49348 | + | 336 | WP_000975314.1 | head-tail adaptor protein | - |
| IF704_RS00400 () | 49348..49725 | + | 378 | WP_000501244.1 | HK97 gp10 family phage protein | - |
| IF704_RS00405 () | 49722..50102 | + | 381 | WP_000611452.1 | hypothetical protein | - |
| IF704_RS00410 () | 50103..51056 | + | 954 | WP_000570652.1 | Ig-like domain-containing protein | - |
| IF704_RS00415 () | 51121..51567 | + | 447 | WP_000442602.1 | hypothetical protein | - |
| IF704_RS00420 () | 51627..51749 | + | 123 | WP_000570353.1 | hypothetical protein | - |
| IF704_RS00425 () | 51805..56454 | + | 4650 | WP_042908137.1 | phage tail tape measure protein | - |
| IF704_RS00430 () | 56454..57944 | + | 1491 | WP_001154327.1 | phage tail family protein | - |
| IF704_RS00435 () | 57960..61745 | + | 3786 | WP_240022153.1 | phage tail spike protein | - |
| IF704_RS00440 () | 61735..61887 | + | 153 | WP_000654329.1 | hypothetical protein | - |
| IF704_RS00445 () | 61934..62221 | + | 288 | WP_001040255.1 | hypothetical protein | - |
| IF704_RS00450 () | 62277..62651 | + | 375 | WP_000340977.1 | hypothetical protein | - |
| IF704_RS00455 () | 62794..62970 | + | 177 | WP_072357969.1 | type I toxin-antitoxin system toxin PepG1 | Toxin Detail |
| - | 62958..63132 | - | 175 | - | - | Antitoxin Detail |
| IF704_RS00465 () | 63182..63436 | + | 255 | WP_000611512.1 | phage holin | - |
| IF704_RS00470 () | 63448..64203 | + | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| IF704_RS00475 () | 64394..64885 | + | 492 | WP_000920038.1 | Staphylokinase | VF |
| IF704_RS00480 () | 65536..65871 | + | 336 | Protein_95 | SH3 domain-containing protein | - |
| IF704_RS00485 () | 66382..66732 | + | 351 | WP_000702263.1 | Staphylococcal complement inhibitor | VF |
| IF704_RS00490 () | 66784..67044 | - | 261 | WP_001791826.1 | hypothetical protein | - |
| IF704_RS00495 () | 67355..67534 | - | 180 | WP_000669791.1 | hypothetical protein | - |
| IF704_RS00500 () | 67906..68103 | - | 198 | WP_000239610.1 | phospholipase | - |
| IF704_RS00505 () | 68492..70231 | + | 1740 | WP_078367702.1 | extracellular adherence protein Eap/Map | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|